Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                    <---------AHL20(1)                                                                                    --------->AHL20(2)                                                                                 --------->ATHB51                                                                                 <--------ATHB1                                                                                 --------->AHL20(2)                                    --------->SPL7                --------->TOE2(3) <---------AHL20(2)                                 <---------ANAC58                ====================================                                 <---------ANAC46                <---------------AGL15                                --------------->AtSPL8           --------------->AGL15                                --------------->AtSPL3          <---------TOE2(3)<---------AHL20(2)                                <---------------AtSPL8     <---------MYB46(3)    <---------ICU4                       --------->ANAC58                    --------->MYB46(2)   <---------YAB1                       --------->ANAC58                    --------->MYB52(2)   --------->ICU4 -------ANAC58         --------->ANAC46               <---------TOE2(3)--------->HSFB2a(2) -------ANAC58       <---------ALFIN1     <---------ZAT14<---------MYB52(1)   --------->YAB1 -------ANAC46  ----------->HVH21<---------ANAC58     <---------TOE1(3)<---------HSFB2a(2)   --------   acgtgcaagtctaatcgcatgacacacccaagaatgcgtacaactaaactgattttgacgttagttaacatttatagaaataataatttaattacaaaca  18710300                                  <------ZmHOX2a(1)                                <---------TOE2(3)                     <---------AHL20(1)                     --------->AHL20(2)                     --------->AHL20(1)                     <---------AHL20(2)                  <---------AHL20(1)                                      <---------ANAC58                  <---------AHL20(2)                                      <---------ANAC46                  --------->AHL20(2)                                      --------->ANAC55(2)                  --------->AHL20(1)                                      <---------ANAC55(2)            ----------->GT1  --------->DOF5.7(2)<---------AHL20(2)        <---------ANAC58           ------->MYC3     --------->TOE2(3)<---------------AGL15   --------->YAB1           <-------MYC3     --------->TOE1(3)--------->TOE2(3)       -------->HAHB4          <-------       <---------WRKY38(1) <---------ANAC55(2) --------->AHL20(2)    <---------ICU4      --------->YAB1       <---------WRKY12  <-----------GT1  <-----------GT1            --------->ATHB12 --------->YAB1  <----------DOF2--------->ICU4 <---------TOE1(3)                   <---------ATHB12 <---------YAB1 ============================================================MADS_MADS    <---------ANAC55(1)<------- ->ANAC46 <---------ANAC46 <---------ANAC46  --------------->AGL15  --------->ICU4 --------->YAB1   agtgctttgtcaacgtgtaatattttattacgttaaggacatttttacattaaatagtatgttttagcaaatgattacgtatagattataatcttacttg  18710400                                                                --------->AHL20(2)                                                       ------------>CBF                                                      --------->TOE2(3)                                                     --------->YAB1    --------->ANAC46                     --------->ARR11(3) --------->YAB1 --ANAC58                                <---------ARR11(3) --------->AHL20(2)                 ------ --ANAC58        --------->ANAC46 <----------DOF2   <---------ATHB12   <-------TEIL      --------->YAB1   gcctccacgaaggaattactcgaaattatccaaaggctttgaagacattttccaaacatcaataaaaaaaatgttcatgggaatttcaaaatcagaatca  18710500                           --------->ANAC58                           --------->ANAC58                           --------->AtLEC2                         <------------ATHB5                         --------->YAB1                        <---------ATHB12  <---------YAB1                      --------->WOX13(1) --------->AHL20(2)                    ------------>CBF    --------->YAB1      ----------->GT1                <---------AHL20(2)   --------->YAB1   <----------ARF1       ------>ZmHOX2a(1)                <---------ICU4   ------->GAMYB        --------->ETT(2)      <-----------HVH21            <---------AHL20(2)  --------->MYB46(3)    <---------ETT(2)     --------->TOE1(3)            --------->AHL20(2) --------->ANAC58 ------>ZmHOX2a(1)          --------->TOE2(3) --->YAB1  --------->AHL20(2)  --------->ANAC58 <----------DOF2  ---------->DOF2   cattcccaaactatttaataaatccaatcatgcaaccaaaaattataatccttttgtagacaaggtcaaaagcttatccttcacataaacaaatgactac  18710600                                                                               --------->HSFB2a(2)                                                                              <-------PIF5                   ---------->DOF2          ---------->DOF2                   ------->PIF5             --------->ANAC55(2)            --------->AHL20(2)               --------->At4g35610             <---------ANAC55(2)         --------->TOE2(3)                   ----------->RAV1(2)       ------------>CBF                <-------TEIL                          --------->ZAT2    <---------ANAC46        --------->RAP2.6(2)                    <----------ID1    <---------ANAC58      --------->At4g35610       --------->ANAC58        ------->TEIL        -----    <---------ANAC58      <---------At4g35610       --------->ANAC58   ---------->DOF2     --------->CCA1(2)   aaacttgcttgcaatacataacaaagtaagcagccataagttacattaaaacacaagcatttgctcaaaacaacaaagcacctggaaatagagatttgaa  18710700                                                                          --------->YAB1                                            ---------->DOF2       <---------HSFB2a(2)              <<                                          <---------YAB1          ------>ZmHOX2a(1)              ----                                       <------ZmHOX2a(2)          --------->HSFB2a(2)           -----                                 --------->TOE1(2)               <---------LBD16                <----                                --------->ZAT2                  ----------->RAV1(2)             <----                                <---------ZAT2              <---------ALFIN1                   ------                                --------->At4g35610      <---------ARR14(2)                    ------      <---------YAB1           --------->GLK1(2)         --------->ARR14(2)                    ------ -->TEIL          <---------TOE2(3)    ==================================HOX2a_HOX2a          -------   tctcgagtattatggagattaatgttgatgaagaagctgggatcatcaaagaagaaacagttccactcctggatgatcaaaatcgaaatcgggacttacc  18710800                                                                                           <---------ANAC58                                                                                    ------>NtERF2 <<<<<GRF7                                                                         ----------->HVH21 ------->HVH21                                                                   --------->LBD16 ---------->AGL15                                                               <---------ANAC46 -----MYB59 --------->ZAT6                                          --------->GLK1(2)    --------->ARR11(3) -----------AGL15                                      <---------At4g35610     <---------LBD16 --->ANAC55(2)                                         --------->At4g35610     ------>MYB83<---------ANAC58 ----->RAV1(2)            --------->DAG2           ----------->RAV1(1)         ------>MYB46(1) ----------->AGL1<---------YAB1   <---------ANAC55(2)--------->MYB46(3)        --------->MYB52(1) ->P ---------->DOF2    ---------->DOF2   <----------DOF2  --------->GLK1(2) --------->TOE2(2)   tgacatagaaaggaacactatgatgcaaaaggcaataggtaagacttttcagacaacagctaatctagctaatcttttacctacggggacagttcttgca  18710900                                                                                      <---------GLK1(2)                                                                                    --------->LBD16                                          <---------MYB59        <-------GAMYB    <---------At4g35610                                         <------ZmHOX2a(2)      <---------ANAC58  --------->At4g35610               --------->ARR14(2)    ------>NtERF2              <---------ANAC58  <---------LBD16               <---------ARR14(2) --------->At4g35610   --------->YAB1         <---------At4g35610      <---------AHL20(2)          <---------At4g35610  <-------TEIL  <---------ANAC58 --------->ARR14(2)   <---------ARR11(3)            <---------DEAR3(1)  <---------ARR14(2)        ----------->RAV1(2)   <---------GLK1(2)            <---------------------WRI1<---------YAB1       --------->At4g35610   --------->ARR14(2)         <---------SPL7         --------->ARR14(2)   <-----------GT1 --------->LBD16           --------->TOE1(2)    --------->MYB52(1)   <---------ANAC58 <---------ARR14(2)   ttccagattttatcgccaatttgcacaaacgttggacgctgcgatctaactagcagattcatgactgcgttgctagtttccatctgcggattctcttgtt  18711000                                                                                            <--------                                                                               --------->ATHB12                                                                              <------ZmHOX2a(2)                           <---------ARR14(2)                                 <---------YAB1---------                --------->GLK1(2)                           --------->MYB46(3)=======================               --------->ARR14(2)                   --------->ARR14(2)       <---------ARR11(3)               <---------ARR14(2)            <---------At4g35610          --------->HSFB2a(2)               <---------GLK1(2)<---------AtLEC2    <---------ARR14(2)    <---------HSFB2a(2)      --------->At4g35610  --------->ARR14(2)--------->At4g35610         <---------LBD16    <--------   tcatacttagcttcacagattcttacaaggatttgaatggtagtgtctgctatggatttgcaacaatccatggtttctggatcattgatggctcagctac  18711100                   --------->ANAC58                 ---------->DOF2               <---------HSFB2a(2)          --------->HSFC1(2)          <---------HSFB2a(1)                                    <---------ARR14(2)          --------->HSFB2a(1)                                    --------->ARR14(2)          <---------HSFC1(2)                                  <---------ANAC58        --------->ARR11(3)                                    <---------ANAC58    --------->LBD16   ------>ZmHOX2a(1)                                     <---------ICU4          <---------ANAC58  --------->TOE2(3)--------->ANAC58                     --------->ICU4           <---------ANAC46 -At4g35610    --------->HSFB2a(2)                 --------->ANAC58              <---------ANAC58 >At4g35610<----------DOF2                         --------->ANAC46             <------NtERF2 =========HOX2a_HOX2a<----------ID1  <-----------GT1    <---------MYB52(1)      --------->ATERF1(1) < -ZAT2  <---------ARR11(3)     <---------TOE2(3)   --------->ANAC58    <----------DOF2           ----   tcttcctcaagaactttccaaaagctacaaactacggtttatcgacttcgtacatgccattatgtcgtttctggtttttggagccgtggttttgtttgat  18711200  Previous    Next  AGI:  At5g46090.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18425.1); similar to Protein of unknown function DUF679 [Medicago truncatula] (GB:ABN08714.1); contains InterPro domain Protein of unknown function DUF679 (InterPro:IPR007770) Range:  from: 18710712    to: 18711356    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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