Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                            ---------                                                                                            <--------                                                                                           <---------KAN4(2)                                                                            <---------RVE1(1)--------                                                                           --------->ARR11(3)--------                                                                           <---------ARR11(3)<-------          <---------LBD16                       --------->LBD16            <---------GLK1(2)---------          --------->LBD16                      <---------LBD16       ------>NtERF2     <---------HSFB2a(2)       <---------At5g28300                  ------>MYB83            ----------->HVH21  --------->HSFB2a(2)      --------->MYB52(1)                    ------>MYB46(1)       ------->GAMYB       ===============      <-----------GT1                     --------->AtMYB61       --------->ANAC46    ------>ZmHOX2a(2)  <---------AHL20(2)           --------->ZAT14<---------LBD16    --------->MYB46(3) <---------ARR11(3) --------->AHL20(2)         --------->LBD16 --------->MYB52(1)  <---------At5g28300 --------->ARR11(3) -->DOF2 ------->GAMYB    <---------LBD16 <---------MYB59      <-----------GT1    <---------YAB1    -   cgatttaataaccgtggaaaaaccgaaacccggtttactcaaaaccaaaccgggatgtattcttttaaccgcgacgagatttttatgatctggaataatc  18707700                                                        <---------DEAR3(2)                                                        <---------MYB46(3)                                                        --------->MYB55(2)                         <---------ARR14(2) <-------GAMYB                         --------->ARR14(2)<---------MYB46(3)                    ------>MYB83           --------->MYB52(2)                    ------>MYB46(1)        <------MYB83 --------->MYB52(2) <---------ANAC46   -------->P             <------MYB46(1) ------NtERF2     ------->GAMYB            ----------->GT1<--------P >ICU4            --------->DEAR3(1)      <---------TOE2(2) <---------At4g35610 -KAN4(1)        --------->MYB46(3)       <---------TOE1(2) --------->At4g35610      --------->YAB1 ->KAN4(2)       --------->DEAR3(2)      <---------MYB52(1)<---------MYB46(3)  <---------TOE2(3) ->YAB1        --------->MYB52(1)       <-------GAMYB  <---------DEAR3(1)     --------->MYB52(1)----- --ICU4       ------>ZmHOX2a(1)<---------ATHB12       <---------MYB52(1)      <---------DOF5.7(2)  <- >KAN4(1)    <---------MYB59   <---------YAB1  ----------->ARR10            --------->DOF5.7(2) ----- ====================HOX2a_HOX2a--------->ATHB12     <-----------HVH21     <-------GAMYB      ------- -------->At4g35610--------->ORA47(1)  <---------MYB46(3)<-------GAMYB   --------->MYB59---------->DOF2   gcagcgtaaaccgttcctaaccgaccagaaccgatgattcgtcgttggttaaatccgtcggttgctgagtctaattcggttaacgaataagaaagaccag  18707800                               ----------->HVH21                    <---------GLK1(1)          <---------HSFB2a(2)  <---------DEAR3(2)          --------->HSFB2a(2)  <---------SPL7          <---------HSFC1(1) <------NtERF2          --------->HSFC1(1)<-----------HVH21    <------MYB46(1)--------->ARR14(3)    <------MYB83   <---------ARR14(3)   --------->MYB59 <---------ARR11(3)   <---------AtMYB61--------->CCA1(2)    <------MYB83 <---------MYB52(1)--------->ARR14(2)    <------MYB46(1) ->MYB46(1)        <---------ARR14(2)   --------->MYB59                           >>>>>>>>>TBF1 --------DEAR3(2)  --------->ARR11(3)   <---------AtMYB61  --------->YAB1  <---------YAB1 ->MYB83 <---------LBD16   <---------DEAR3(1)   <-----------GT1    <------ZmHOX2a(1) -->MYB46(3)     ----------->ARR10    <---------MYB52(1)--------->YAB1 --------->ARR11(3) ---------->DOF2   ccggtttggtttctggaagaagatattcgtcgtcggaccggtttggtttttttctgcataataagaagaggaagattatgagaagaagaagagaaagaga  18707900                                                                           --------->ICU4     <------                                                                           <---------YAB1     -------                                                                         --------->YAB1     <--------                                        ---------->ID1          --------->AHL20(2)        <-------GAMYB                                   <---------ARR14(2)           <---------AHL20(2)   <---------YAB1 <         --------->MYB52(1)        --------->ARR14(2)       --------->AHL20(2)<---------TOE2(3)    --   <----------ID1                  <---------GLK1(2)    ---------->DOF2 <---------YAB1   --------->ALFIN1   gagaagagacaaaactgaagcgtaagcgattttttcagatttgtccatttgatttcaacaaagaaaataaatgtatgattatggattatgggtgttgtgt  18708000                                ---------->DOF2                           --------->AHL20(1)                           --------->AHL20(2)                                          <-------TEIL   --------->AHL20(2) --------->AHL20(2)                                            *TSS   <---------AHL20(2) <---------AHL20(2)                --------->ANAC58        <---------ATHB12 ---ANAC46            --------->AHL20(1)                --------->ANAC58        --------->AHL20(2) ---->GT1             <---------AHL20(1)    <----------ID1                ----------->GT1 -ANAC46 --------->ANAC46  <---------AHL20(2)    ---------->DOF2     <---------HSFB2a(2) ---------ICU4     ----------->GT1        ---------->DOF2        <---------ANAC46--------->YAB1 ------->ICU4      --------->YAB1  ----------->GT1    ---------->DOF2--------->HSFB2a(2)            <   aatatttatatacgaagagaataataaaataaaataaaggtcaaaaaagacaaaaggaaagaaattttcgtctagatggtcaataaatattcatggacta  18708100                                                                       <-----------TBP                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                     --------->AHL20(2)                                                                     <-----------TBP                                                                     <---------AHL20(2)                                                                   <---------AHL20(2)                          <---------DAG2                           <-----------TBP                          <----------DOF2                          --------->AHL20(2)                  --------->ARR11(3)                             <---------AHL20(2)                  <---------ARR11(3)                             --------->AHL20(2)               <--            ----------->GT1                                      <-----------TBP                 ----          <------ZmHOX2a(1)   --------->YAB1                   ----------->TBP                   <---        --------->MYB59<-----------GT1                        <---------AHL20(2)                 <---   <---------TOE2(3) <----------DOF2  --------->CCA1(2)      --------->AHL20(2)       <-----------GT1   <---------TOE1(3)<---------ICU4   --------->AHL20(1)     <---------YAB1  ----------->GT1---------- ----------DOF2   --------->GLK1(2) --------->AHL20(2)     --------->AHL20(2)    <---------YAB1------   ctctttaggttaggaagaaaaatctttacttttcataaatatatgaaaaatatgtttttaatattatatatatatatatagttatttttcacatggtaag  18708200                                                                                                   --                                                                                                -----   <---------AHL20(2)                                                                         -------  <---------AHL20(2)                                                                          <------  --------->AHL20(2)                                                                          <------ -------RVE1(1)                               <---------AHL20(2)          <---------GLK1(1)  -------- ----->ARR11(3)                              --------->AHL20(2)    --------->ARR11(3)     --------->YAB1 ------ARR11(3)                            --------->TOE2(3) <---------ANAC55(2)   --------->DAG2  <- ------GLK1(2)    <---------YAB1         <---------YAB1      --------->ANAC55(2)  ---------->DOF2 --- ->GT1  ----------->GT1              <---------AHL20(2)    --------->AHL20(2)  --------->YAB1-------- ----->ARR10<---------AHL20(2)     <---------YAB1 --------->YAB1   <---------ARR11(3)  --------->YAB1   atttttaaatttgttaaattctaatttcagtttgagtattattttcattaaatcatagaaattacttaagatgttgatttctcataaagtcataatatta  18708300      <---------ANAC58      <---------ANAC46      ----------->GT1      <---------ANAC58  <---------ICU4  --------->YAB1 <---------ATHB12 ------->YAB1 ---->YAB1 -->AHL20(2) ---AHL20(2) ---YAB1                                ----------->GT1 ->TOE2(3)                        --------->YAB1              <---------YAB1    <---------REM1(1) --------ICU4                 --------->MYB46(3)         --------->ATHB51       ----------->GT1  <--- ------>ICU4             --------->TOE1(3)               <---------ICU4    <---------AtLEC2     <---- ->YAB1                  --------->TOE2(3)            --------->YAB1  <----------DOF2           -----   ataatcatgcgtaaaaaaaaaaaaaaacattaacaaacatatttgtaaaatagtatgcataatttcgattgtctttttcatggtgtaacttaagtttgtc  18708400                                     --------->ICU4       <---------GLK1(2)           --------->ANAC55(2)   ---------->DOF2                 <---------ANAC55(2)            <---------GLK1(2)  ------>ZmHOX2a(1)    --------->ANAC58             <---------AHL20(2) ------DEAR3(2)        --------->ANAC58             --------->AHL20(2) -----DREB2C(2)        --------->ANAC46 <---------YAB1     <---------YAB1----------->GT1  --------->YAB1 ---->ETT(1) ---------->DOF2   <-----------HVH21   --------->AHL20(2)  ---------->DOF2 --------->YAB1   ggtcctaaagaatttcaaagtgcaaacgcaaactatcacatgatgatagaacatttaattcatcaatggattctaaagtaaaaacaaaataatcagaaat  18708500                           --------->LBD16                          --------->TOE2(3)                          <---------ANAC46                  --------->YAB1                  <---------ICU4                                              --------->ANAC46                 --------->ICU4                                             --------->ANAC46               --------->YAB1                                               --------->ANAC58               <---------ICU4                                               --------->ANAC58              --------->AHL20(2)                                          ----------->RAV1(1)              <---------AHL20(2)                                         --------->MYB46(3)             <---------YAB1--------->At5g28300                         --------->ARR14(2)          --------->AHL20(2)                       --------->DAG2      <---------ARR14(2)   ---------          <---------AHL20(2)  ---------->DOF2     ---------->DOF2 <-----------HVH21        ----------          <---------YAB1  ----------->GT1     ------>ZmHOX2a(2)  ------>ZmHOX2a(2)      --------->LBD16   --------->ANAC58  --------->YAB1    --------->DAG2          --------->ARR11(3)     <---------LBD16   --------->ANAC58 <---------YAB1    ---------->DOF2          <---------ARR11(3)    --------->MYB52(1)   atgacacactatattattaattatcataccgtaaaagaaaaaaagtgatcgaaaaagtttagatagatcgtcagaaccacacaaaatcaccggaaaagtt  18708600  Previous    Next  AGI:  At5g46080.1    Description:  protein kinase family protein. similar to ACR4 (ARABIDOPSIS CRINKLY4), kinase [Arabidopsis thaliana] (TAIR:AT3G59420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66393.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 18706769    to: 18708084    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version