Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ----------->GT1                     <---------AHL20(2)                     --------->AHL20(2)                 <---------RVE1(1)                        <----------DOF2                 <---------CCA1(1)                        <---------DAG2                <---------AHL20(1)                 <------ZmHOX2a(1)                --------->ARR11(3)                ----------->GT1                                   <              <---------TOE2(3)                   <----------ID1                 --------->YAB1    --  <---------YAB1<---------ARR11(3)             ---------->DOF2    --------->ETT(2)        <---------ANAC46   aattttgatatagtttaagatatttatttgtaaaatttgtatttgaataaaaaggataaactttttggtagaccggttcgaaataaaaatttgtgtagaa  18698200           <---------GLK1(2)          <---------ICU4                                                                       <-----          <--------ATHB1                                                                 <---------ALFIN1          -------->HAHB4                                                       <---------CCA1(2)         --------->ICU4                                                   --------->ARR14(2) <-------         <---------YAB1                                                   <---------ARR14(2) <-------         <---------ATHB12                                                --------->GLK1(1)   --------        <---------TOE2(3)   --------->AHL20(2)                           <---------CCA1(2) --------->ANAC46       --------->YAB1 <---------TOE2(3)--------->ANAC58             ---------->ID1     <---------ALFIN1 ---------TOE2(3) <----------DOF2 <----------ID1                <---------ANAC58      <---------REM1(2) ------->MYB52(1) --------->TOE2(3)    --------->ANAC58         <---------ANAC58<-----------ARR10  <-   ttaagggattaatgattcttctttaatgttttaaataggccaagcccgtttctattagcctcgttgtcttggcccatatccaaatctctccacacttcac  18698300                                                                                              -------                                                                  --------->HSFB2a(2)   --------->ANAC55(1)                                               <------------------------ANAC81          --------->ANAC58                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           --------->ANAC46                           <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <---------ANAC55(2)                   <---------WOX13(1)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->ANAC58                 --------->ATHB12         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            --------->ANAC55(2) ------------AGL1<---------ICU4          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------SPL7 --ZAT14         --------->ATHB51        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <----------DOF2 -------- --ZAT18        --------->ICU4    <---------TOE2(3)           <---------ANAC58      <---------ANAC58 ->ZAT14        <---------YAB1   <-----------GT1              <---------ANAC58      <---------ANAC58 ---------DOF2--------->YAB1  --------->YAB1<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <-----------RAV1(1)   tcttttggtcacaaactcataattggcaacttttataacgttttttttttttttttttttttttgcttctacaatgtttctttgtggcatacgcaacgtt  18698400                                               <---------ANAC58                                               <---------ANAC58                                         <---------ZAT6                                      --------->DAG2                                  --------->YAB1 ----------->GT1          <-----------GT1                     --------->AtLEC2---------->DOF2     <---------AHL20(2)                      ----         <---------HSFB2a(1)     <---------YAB1<---------ANAC46<---------YAB1              <-------TEIL -->TOE2(3)   ------>ZmHOX2a(1) <---------AHL20(2)       --------->AHL20(2)            ----------->GT1 --->GT1 --------->HSFB2a(1)    --------->AHL20(2)   <-----------TBP <---------YAB1 ------------>MYB.PH3(1)   actactgaagaacatcctatttcatgcagtttattttaataaagtgttagcgtgtatatataattctcattactattttctattcaaaacagttacatcc  18698500                    --------->AHL20(2)                    <---------AHL20(2)                  --------->AHL20(2)                  <---------AHL20(2)               --------->AHL20(1)               <---------AHL20(1)            <---------AHL20(2)            --------->YAB1                 ---------->DOF2     <-----------ARR10                   ----------->TBP     --------->ARR14(2)                  <---------AHL20(2)     <---------ARR11(1)               <---------AHL20(1)     <---------ARR11(3)               --------->AHL20(1)     <---------ARR14(2)           <---------AHL20(2)                          --------->KAN4(2)    <---------CCA1(2)             --------->AHL20(2)                ---------->DOF2         <--------    --------->GLK1(1)<---------YAB1--------->AHL20(2)      <---------AHL20(2)<---------KAN4(1)     -- ------>DOF2--------->AHL20(2)   --------->AHL20(2)  *TSS --------->AHL20(2) --------->KAN4(1)<------   aaaggcatatctaattatatattaatataagtgaaattaatatataaaagtcgactcagattaaatgaagcaaagtggattattctatacgtctaagatt  18698600                                                                 ----------------->AGL3       <----------DOF2                                         --------->ARR14(2)    <---------ARR11(3)                                --------->AHL20(2)    --------->ARR11(3)                 <---------AHL20(2)      <---------ARR14(2)                   -   <---------CCA1(2)      <---------ANAC58  --------->ANAC58   ------->TEIL   --------->TOE2(3)     < -TOE2(3)   <-----------GT1------>ZmHOX2a(1)--------->ANAC58--------->ANAC55(2)                   <-- ---->ZmHOX2a(1)          <---------ANAC58  --------->ANAC46<---------ANAC55(2)                   --- ---GLK1(2)<---------CCA1(2)     <----------DOF2  --------->AHL20(2)  --------->AHL20(2)          <--   cctctaaatctttatatccatctcagttccttactctttattttatacgcaaaaaaataaaaacgtatccatatatataacatttatgtgtgtgtaagaa  18698700             --------->ANAC58             --------->ANAC58          <---------ATHB12        --------->WOX13(1)      <---------YAB1    --------->YAB1   <---------AHL20(2)   <---------YAB1                                                            <---------------AtSPL8-- -------->AHL20(1)                                                        ---------->DOF2      <----- ---------AHL20(1)                                             <---------CCA1(1)               <----- -------ARR11(3)                                               <---------RVE1(1)           <------MYB46(1) ------>ARR11(3)                                              <---------ARR11(3)           <------MYB83 -------AHL20(1)                             ---------->DOF2  --------->ARR11(3)     ----------->ARR10   tatatattataaatcaagacagacattttagcacagaagtagagaaacaaaggaagaagatggagatatttgtgaagaaagagtacttagatttggttct  18698800                                                                  ------>ZmHOX2a(1)                                                                 <---------ANAC58                                                                 <---------ANAC58                                                             <----------DOF2                       <-----------GT1                   <---------MYB52(1)               --------->YAB1                           <----------DOF2               <---------ICU4                           ------>ZmHOX2a(1)     --------->ATHB51 -------->ID1 <---------YAB1                           --------->TOE2(3)     <---------YAB1 ------->TEIL ----ANAC58   <---------ATHB12                      --------->GLK1(2)      <---------------AGL15 ----ANAC58 --------->YAB1  <-----------GT1         --------->ARR14(2)    ----------------->AGL2   tgtcccatttggattaatcatagttttatcttaccatctatttcttctctatagaatcctttactttccttaccataccattatcggtttcatgaacatc  18698900                             --------->ANAC46                             --------->ANAC58                             --------->ANAC58                         --------->AtLEC2                     <---------ARR11(1)        <----------DOF2                    <---------CCA1(2)    --------->At4g35610                    <---------ARR14(1) --------->YAB1             <---------ICU4           <---------TOE2(3)              <---------ETT(2)        <---------YAB1      <---------ICU4                 <---------AHL20(2)              --------->ETT(2)   --------->ANAC58       --------->GLK1(2)               --------->AHL20(2)              --------->WRKY38(1)--------->ANAC58  --------->ANAC46   <-----------GT1<---------------AGL15   gataaatccatttgggtcgaccgtatcatgcaggcaagttatcatctctctttacgacaatcttttcaaaattatcgatatcgatttctatttaatgttt  18699000                                                               <----------DOF2                                                               <---------DAG2                                                            <-----------GT1                                                           <---------YAB1                                                         -------->HAHB4                                                         <--------HAHB4                                                         -------->ATHB1                                                         <---------ICU4                                  <------MYB83           --------->ATHB51                                  <------MYB46(1)        --------->YAB1                       <------                                 --------->MYB59        <---------ATHB51                      -------                             --------->ATHB12           <---------ATHB12                   <---------MYB52(1)                            <---------YAB1              <---------YAB1                    <----------                            --------->ICU4              --------->ICU4                ------------>MYB.PH3(1)                          --------->YAB1             <---------YAB1                --------->CCA1(2)         <-----------GT1 --------->ICU4           <-----------GT1    <----------DOF2  --------->MYB52(1)      <---------ICU4 --------->AHL20(2)    ----------->RAV1(1)<---------YAB1     <<<<<<<<<RAP2.2   tgtccaacttattacaagataaaaaaaatgatgatttggtaatgccaacatttttctaattattacttttgctatatggatttagatataacggttagct  18699100  Previous    Next  AGI:  At5g46060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66386.1); contains InterPro domain Protein of unknown function DUF599 (InterPro:IPR006747) Range:  from: 18698553    to: 18699857    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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