Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------TEIL                                                                                             <-------                                                                                            ---------                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                           --------->ARR11(1)                                                                                     <------ZmHOX2a(1)                                                                             <---------------AGL15                                                                             --------------->AGL15                                                                            <-----------------AGL1                                              --------->AHL20(2)            ----------------->AG                                             <---------AHL20(2)             <-----------------AG                                             --------->AHL20(1)             ----------------->AGL1                                             <---------AHL20(1)         <----------DOF2  ----------->ARR10                                          <---------AHL20(2)         <-----------GT1<---------YAB1  <---------ZAT6                          --------->AHL20(1)    <---------AHL20(2) <---------TOE2(3)  ----------->GT1          <----------DOF2--------->AHL20(2)    --------->AHL20(2)--------->YAB1----- ->At4g35610        <----------DOF2----------->GT1          <---------AHL20(2)------>ZmHOX2a(1)<----- --At4g35610  --------->ZAT14   <---------ANAC46           --------->AHL20(2)<---------MYB59---------   cctagtgttaaatctgttcagactttaaacttttatgtggaaaataaaatatttatgccaattttataaattttcttttcctaattaggataagatacgt  18696000    <----------DOF2    <---------DAG2 -->ANAC58 -->ANAC55(2) -->ANAC46                                                              ------>ZmHOX2a(2) ---ANAC55(2)                                                          <------ZmHOX2a(2) -->ANAC55(1)                                                         --------->ARR11(3) -->bZIP60(2)                                                         <---------ARR11(3) -->ANAC58                                                            --------->AGP1                - ----STF1                                                   --------->CCA1(2)                     --- >CCA1(2)             --------->ATHB12                     <---------ARR11(3)                  <----- ---->TGA2(2)        --------->MYB46(3)                    --------->ARR11(3)                 <------ ------TGA1     <---------ANAC58                         <---------TOE2(3)                    ------- >ARR14(1)      <---------ANAC58                    <----------DOF2   <---------AGP1    ---------->DOF2   catcaacttttagttctgtcgtaaccattgaaaagtttccaagactcatggcaacttttaagatataagatagatcttaaaaacttcgaaaaaagactgt  18696100             --------->YAB1         <---------AHL20(2)    <---------ICU4    <--------HAHB4    --------->YAB1   --------->ICU4   <---------YAB1    <-----------GT1                                                      ---------->DOF2 --------->YAB1    --------->AHL20(2)                                                  ------->GAMYB <---------ICU4    <---------AHL20(2)                                              --------->MYB46(3) -------->ICU4 <---------YAB1                                                     ------>MYB46(1) ------>YAB1 ----------->GT1             --------->AHL20(2)               <---------ICU4---------->DOF2 --GAMYB--------->AHL20(2)      ---------->DOF2                          --------->AHL20(2)     ----- ---ZAT6<---------AHL20(2)   --------->YAB1       <---------TOE2(3)---------->DOF2------>MYB83  ----- ---->GT1<---------YAB1     <---------YAB1      ---------->DOF2  <---------ZAT6  --------->ANAC46  <-   taataatcattttaattgtaattaaactctatgataaagaatataaaatataaaggaaactaaattagtgaaagaataaataccaacaacgaaagagcaa  18696200                     ------>ZmHOX2a(2)                     =================HOX2a_HOX2a                   <---------ARR14(2)                   ------->TEIL       ------->GAMYB<---------GLK1(1)      <---------MYB55(2)       <------ZmHOX2a(1)           <----------DOF2      --------->MYB46(3)       =====================HOX2a_HOX2a               ------>MYB46(1) ---->ANAC58       <---------ARR11(3)        <------ZmHOX2a(2)                ------>MYB83 ---->ANAC58       --------->ARR11(3)       --------->ARR11(3)               ------>ZmHOX2a(1)     -- ---------DOF2     --------->ARR14(2)       <---------ARR11(3)<---------ANAC46-------->P  <----------   gctttccaacgacctctaatggatcttcgaacaggattgccttgaagatcaactgttccatcttttgtgtaatcgtctcctacctcttctactgtcattt  18696300                                                      <---------MYB52(1)                                             <--------P                                           <------MYB83                                           <------MYB46(1)                                          --------->MYB111(2)                            ---------->ID1                      <----------DOF2     --------->MYB46(2)                        <---------DAG2              <----------DOF2             --------->MYB59                *TSS <---------DEAR3(1)----- ---->ZmHOX2a(1)  <----------DOF2         --------->MYB111(1)  <---------AHL20(2)   <----------DOF2 -HVH21   <----------DOF2 <-----------GT1 <---------MYB46(3)  <---------AHL20(2)<------NtERF2   -----   cctctctaccttctttctttctttcttttctctctctaatttgtttggtagtttctgttttttttttaatgtcaagagagtcggcacttttgtctcatat  18696400                                                --------->ANAC46                                        --------->HSFB2a(1)                                        <-                                       --------->GLK1(2)                                          ---                                       --------->ARR14(2)      <-----------GT1                    <--                                       ------->TEIL  --------->ZAT6                         ---------                                       <---------ARR14(2)   <---------ICU4             <---------AHL20(2)                                       <---------ARR11(1)   --------->YAB1             --------->AHL20(2)                             --------->YAB1     --------->ANAC58      ----------->HVH21<---------AHL20(1)                         <---------ANAC55(2)    --------->ANAC58<---------At5g28300   --------->AHL20(2) <-------TEIL        <-----------HVH21<---------ARR14(1)   <---------YAB1             <---------AHL20(2) ---->AHL20(2)     <---------MYB46(3) <---------CCA1(2)  --------->YAB1 ---------->DOF2--------->AHL20(1) ------>TBP     --------->ATHB12   <---------------------WRI1 <---------YAB1  ---------->DOF2    ----   atatacatattaagtagatgatgggtcacatgaataatgcgaatctttcaacgtaacacttataattactgtctgaaagtgaaagttattaaattagtaa  18696500                                              <---------ICU4                                              --------->YAB1                                             --------->ICU4      <-----------RAV1(2)          --------------->AtSPL8      <---------HSFB2a(2)       <----------DOF2      --------->HSFB2a(2)      --------->TOE2(3) ----------GT1                 --------->TOE1(3) <-----------GT1 ------>AHL20(2)        <-----------GT1      <---------YAB1 -------AHL20(2)        <---------YAB1     --------->YAB1                     <-----------GT1 -->GT1  <------ZmHOX2a(1)   -------->P<-------TEIL                     ----------->GT1 ----->ICU4           --------->YAB1   ------->TEIL                  <---------ARR14(2)      <-------   ttaatcgtccaggagtttacaaaattatactaacctttatgtacataataataacataactaaaatatgcagaaatgttattacgaagtaagtttatttt  18696600                       <---------MYB46(3)                      <---------WOX13(1)     --------->ATHB12                                       <                      <---------YAB1         <---------ICU4                                    <-----                    --------->ATHB12        <---------YAB1                                 -------->P                    -------->HAHB4          --------->ICU4              <----------DOF2 <------ZmHOX2a(2)                   --------->ICU4       <-----------TGA1      --------->ANAC46     ---------->DOF2 <-                <---------AHL20(2)     --------->YAB1       <---------ALFIN1    XXXXXXXXXXXXXXXXXXXX>MIR398A    <---------YAB1 <---------YAB1 <---------ANAC58   <----------DOF2 --------->ANAC58  <---------ARR11(3) --YAB1        --------->AHL20(2) <---------ANAC58 ---------->ID1    --------->ANAC58  --------->ARR11(3)   tgacttattagagactataaaatgattgttgtgctagcttatcgtcatcatttgtctttcatacacctcgctcgctatatgtattcaaagatcaaccctt  18696700                                                                      --------->REM1(1)                                                                    ------>ZmHOX2a(1)                                     ------->TEIL              ------>ZmHOX2a(2)                                --------->At4g35610           =============HOX2a_HOX2a                        --------->ATHB51                      <------ZmHOX2a(2)                        <---------AHL20(2)                   --------->ARR14(2)                        --------->AHL20(2)                   <---------ARR14(2) <<<<<<<<GATA-1         --------->ATHB12                     <---------GLK1(2) -----DOF2             <---------AHL20(2)         <----------DOF2------>ZmHOX2a(1)           -------- ----------GT1   ----------->GT1<---------At4g35610     --------->MYB52(1)      <---------AHL20(2)   ttatctatgtgttttcacatggaaaattatttgcagatgaacatatgtcttactttccaaacggatcctcctacatctatatataaacactggtttagaa  18696800                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                            ---------                                                                                        <-----------GT1                                                                                     --------->YAB1                                                                                  --------->AHL20(2)                                                                                 --------->AHL20(2)      --------->ANAC58                                       <---------TOE2(3)   <---------AHL20(2)      --------->ANAC58                                 <---------YAB1            <---------ATHB51 ---  --------->ANAC46                               <------ZmHOX2a(1)               --------->ICU4  ---- --->GT1                                  ---------->DOF2   <-----------GT1 <---------TOE2(3)    <---   aaatacacaagaaaaacacatcaaattgttgattcagagtcacaaaatgcaggacttactattaacattttggacattaagaaataattttaactggtaa  18696900  Previous    Next  AGI:  At5g46050.1    Description:  ATPTR3/PTR3 (PEPTIDE TRANSPORTER PROTEIN 3); transporter. Identical to Peptide transporter PTR3-A (PTR3-A) [Arabidopsis Thaliana] (GB:Q9FNL7;GB:Q8VZK3); similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT5G46040.1); similar to putative nitrate transporter NRT1-3 [Glycine max] (GB:BAB19758.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71450.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63331.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109); contains InterPro domain MFS general substrate transporter (InterPro:I Range:  from: 18692262    to: 18696373    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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