Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <--------P            <---------TOE1(3)            <---------TOE2(3)                                   <---------YAB1           <---------ANAC46                                   <---------ICU4     <---------TOE2(3)                              <-------TEIL--------->ICU4     <---------TOE1(3)                             --------->CCA1(2)       <---------ATHB12   ---------->DOF2    ----------->GT1              --------->GLK1(2) <-----------GT1          <------   cttggtaaaggtttagggtaagttaagttatattgatggtattgtatagagagattcaagaaaatcatttttaacaaatcaaggcaattgatgagtttca  18682400                                                                                                 <---                                                                                               ------                                                                                               <-----                                                                                        <-----------HVH21                                                                                       --------->O2                                                                                       <---------TGA1a                                                                                       <---------O2                                                                               <---------ICU4 -------                                                                              <---------YAB1  <------                          <---------AHL20(2)                                  --------->ICU4<--------                          <---------AHL20(1)                                --------->YAB1  ---------                          --------->AHL20(1)                                <---------ICU4  <--------              --------->TOE2(3)   --------->YAB1           ---------->DOF2 --------->ICU4----------->HVH21  <---------TOE2(3)  <---------ARR11(3)                ==========================================MYC_MYB  <---------TOE1(3)  --------->ARR11(3)     ---------->DOF2======================================bZIP_DOF ---------->DOF2    --------->YAB1<---------ICU4       ------->GAMYB       <---------ATHB12 --------- -TEIL       --------->YAB1    --------->YAB1    <---------REM1(1)  <------ZmHOX2a(1)  --------->TGA1a   ttttaaagttgtcaaacataaatgatattatattgatcatcacaaacaaagttgtaaccgaaaaagaagaggatgaaatcatcatggactcgtgacatca  18682500     ------>ZmHOX2a(2)    <------ZmHOX2a(2)    --------->CCA1(2)   --------->ARR11(3)   --------->ARR14(2)   <---------ARR14(2)   --------->AGP1   <---------ARR11(3)   <---------AGP1  <---------CCA1(2) ------YAB1                                           <---------At4g35610 --->ATHB12                                   <---------bZIP60(1) ----ICU4                                    <------NtERF2 -->ICU4                                 <------MYB46(1) ---YAB1                                 <------MYB83 --------->At4g35610 -bZIP60(1)                              --------->MYB52(2) >bZIP60(1)                              <---------MYB46(3)                     <-----------GT1 -TGA2(1)                               <---------DEAR3(1)               ---------->DOF2 >TGA2(1)                               <---------AtMYB61          <---------ATHB12<----------DOF2 <-   ttgtagatctgagtcaaaacatttgtgaaacattcttcgacgttggtggcatcaagagctgatgtttcaatgaataaaagtttttctttctctgcgaaag  18682600                                                      --------->MYB46(3)                                                     ------>MYB46(1)                                                     ------>MYB83           <---------DEAR3(2)                                                   --------->TOE2(2)       --------->ETT(1)                                                <-----------GT1           <<<<<<<<<<DREB2A                                          <---------ARR14(2)              <<<<<<<<<<DREB1A                                        ----------->ARR10       <---------ICU4                      -                                      <------ZmHOX2a(2)         --------->YAB1                  <----                                     --------->ARR11(3)        <---------YAB1                   -----                                     <---------ARR11(3)------->GAMYB   <----------DOF2          -----        =====================================HOX2a_HOX2a  --------->YAB1  ---------->ID1    ---------        ------>ZmHOX2a(1)          --------->ICU4 --------->MYB46(3)  <---------ANAC58 --------->GLK1(2)   <---------ANAC58   <---------HSFB2a(2) --------->ARR14(2)  --------->ARR11(3)       <---------ARR14(2)   <---------ANAC58   --------->HSFB2a(2) <---------GLK1(2)   <---------ARR11(3)  ---------->DOF2<--- ---------DOF2--------->YAB1    --------->WRKY18(1)--------->TOE1(2)  <---------ANAC58 --------->ARR14(2)   actttgcttcctccattgatacttctcgacgatggtcaagatcagatttgttaccaacgagcatgatcatgagcttgtcggtatcaaagaatccacgaag  18682700           --------->ZAT14           --------->At4g35610         --------->ANAC58    --------->ANAC58                   ----------->GT1    --------->ANAC46                   --------->ANAC58    --------->ANAC58                   <---------ANAC55(2) ------>ZmHOX2a(1)                   <---------ANAC46 -------->TOE2(3)                 ----------->HVH21 -----HSFC1(2)                  <---------ANAC58             <---------At4g35610 ---->HSFC1(2)                  <---------ANAC46             --------->At4g35610  <---------ANAC46 ---->HSFB2a(1)                 <---------ANAC58         --------->YAB1           <---------ANAC58 >ANAC46   <---------ZAT14   <---------MYB52(1)<---------ANAC46              <---------MYB46(3) ------ARR14(2)           ------->TEIL --------->ANAC55(2)   <---------GLK1(1)    <---------ANAC58   ttccttaagccactgctcaacattcttgaacgttgtgtgactcgtaatatcgtatacaattagagctcccatggctcgatggtagcgagcatgtcttaca  18682800                                                                       <----------DOF2                                                                      <---------MYB52(1)                                                                ------>MYB46(1)                                                                ------>MYB83                                                              <---------MYB59                                                              <---------MYB111(1)                                                              <---------MYB46(2)                                                             ----------------->AGL1                                                   --------->MYB52(1)--------->LBD16                               ---------->DOF2  --------->TOE2(3)  <---------LBD16                    ----------->GT1  ----------->GT1         ----------------->AG              ------   tgtctatagctatacgaatacatggaaacaaaaaaaagcatgtaaaaaaaacttaactggagtacctaatccggtttttggttttttgaattttagataa  18682900                            --------->AHL20(2)                        <------MYB46(1)                    <-------GAMYB                   --------->ATHB12                       <---------MYB46(3)                <----------DOF2                           ----------->GT1         <------ZmHOX2a(1)  <---------AHL20(2)           <---------TOE2(3)     ---------->DOF2    <------MYB83                 <------------CBF    <---------AHL20(2)     --------->MYB52(1) ----------->GT1            <---------YAB1      ----------->TBP --->AHL20(2)  --------->TOE2(3)                  ------------>CBF   <-----------TBP       <---------YAB1   tataaaccaaaggattacctttgatttggtttaaatgcagtttcagttttagtacaattgtggttaaatctatatataaactttgaatgtgatattatag  18683000                                                                          <------------CBF                                                                        --------->AHL20(1)                                --------->AHL20(2)                     --------->AHL20(2)        <<<<                                <---------AHL20(2)              <----------ID1           <---------AHL20(2)                               --------->AHL20(2)               ----------->GT1    <---------ANAC58                               <---------AHL20(1)     <---------AHL20(2)--------->AHL20(2)     <-----        <-----------GT1        <---------AHL20(2)     --------->AHL20(2)<---------AHL20(2)     <-----  <---------TOE2(3)<----------DOF2           <---------GLK1(1)---------->DOF2      <---------ANAC58   aaatgaggtttttcggtttatcttttaatctaatttaatttcagtagatttcttatttttttaaaaaagaaaaaaaaattggtttgcttatttcatttgg  18683100                                     --------->YAB1                          ----------->GT1                          <------MYB83 <<<<<MYB2                <------MYB46(1)                        ----------->GT1 -MYB83 <----------DOF2   <---------MYB46(3)                 ---------->DOF2          --------->HSFB2a(2) -MYB46(1)             <------------CBF                 --------->CCA1(2)             <---------HSFB2a(2)   ttttccctagcttttattcaatagagattggttaaactagaataaatctcttagaaagatagagaaagggtttatagatcgaaccgttctcgacaatcga  18683200                                                                    <-------GAMYB                                                                    <---------At4g35610                                                                ----------->RAV1(1)                                                               ----------->HVH21                          <---------YAB1                       ------->GAMYB                  --------->ICU4                               --------->At1g77200              --------->LBD16                                 --------->DEAR3(2)              ------>NtERF2                              <-----------GT1     <-----------GT1             --------->RAP2.6(2)        <---------MYB46(3)   --------->MYB52(1)  --------->ATHB12           <---------At4g35610     <---------YAB1       --------->AHL20(2)  <-----------GT1   tgtctcatagttgagccgcgataattttctcattgttgtgaatggttcgggtctcaaatttactaccgacagttgattttaactcattgaacttattttt  18683300  Previous    Next  AGI:  At5g46025.1    Description:  Ras-related GTP-binding family protein. similar to AtRABA1e (Arabidopsis Rab GTPase homolog A1e), GTP binding [Arabidopsis thaliana] (TAIR:AT4G18430.1); similar to RAB11B, member RAS oncogene family [Homo sapiens] (GB:AAV38342.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753) Range:  from: 18682482    to: 18682823    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version