Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->GLK1(1)                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    --------->ARR14(2)                                    <---------ARR14(2)                                    <---------AGP1                     ----------->GT1--------->ARR11(3)                  --------->ATHB12  <---------ARR11(3)                                    <---------ARR11(3)                  -------->HAHB4    <-----------ARR10                                  <----------DOF2                 <---------YAB1    <------ZmHOX2a(1)                  ------->GAMYB   <---------ICU4                 --------->ICU4   <---------HSFC1(2)                 --------->ANAC46<---------YAB1                 <---------ATHB12 --------->HSFC1(2)       <---------GLK1(2)     <---------ARR11(3)   aaatggttcaagaacagaaatgattgtaacaagagaaggatctaaaccgatttcttcacgagcttctctcaacgcagtagctatatcatctttatcttct  18647500               --------->ANAC58               --------->AtLEC2               --------->ANAC58                                                     =================               --------->ANAC46                                                     --------------->AGL15              --------->LBD16                                                       <---------------AGL15             <-----------RAV1(2)                                    <---------TOE2(3)  ---------->DOF2           ------>ZmHOX2a(1)                         ------>ZmHOX2a(1)         <----------DOF2    <----------DOF2                        <-----------GT1         ---------->DOF2 ----------------->AGL2   tggtctctttttcctccaggcaatgctacttcccctgtttttttttaacaatttcctctgtttctagtttaaagatgaaaactttactaaaaagagtaat  18647600                         <------ZmHOX2a(1)                <---------TOE2(3)                      --------------->AGL15               <---------TOE1(3)                      <---------LBD16                <------MYB46(1)             <---------YAB1                          <------MYB83          --------->GLK1(2)                          ----------->GT1         <---------ARR11(3)                       <---------MYB52(1)  <---------ZAT2         --------->ARR11(3)                   --------->ARR11(3)<---------ANAC55(2)         <---------GLK1(2)                    <---------ARR11(3)<---------ANAC46        <---------RVE1(1)==============================HOX2a_HOX2a  <---------CCA1(2)   ---------->DOF2 <-----------GT1     <---------ZAT14    <---------YAB1         ---------->ID1 =====================================MADS_MADS ------>ZmHOX2a(2) --------->ANAC46      <----------DOF2   gtcttaaaagagattttgattttaccaggatgagaagagagagtagtagatcgtttggttaagattacgcgtagctcgtttttgtcttctctttgttctt  18647700                              <---------AtLEC2                        <---------ARR14(2)                        --------->ARR14(3)                        <---------ARR11(3)                        <---------ARR14(3)                                                 --------->GLK1(2)                        <---------GLK1(2)                                             <-----------GT1                        --------->ARR11(3)                                        <---------GLK1(2)                 <---------At4g35610                                              --------->ARR11(3)-                 --------->At4g35610                          --------->ICU4      <---------ARR14(2)-                 <---------ZAT2                 <------ZmHOX2a(1)               ----------->ARR10   <                 --------->ZAT2  <------ZmHOX2a(1)           <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <-   ggtatagacaaactaatacagctgaagattttgcaggaaaatgttgacgaggatgagtttggcaattttgaaacagtttgatcagattttgcaattctgt  18647800                                                                     ------>ZmHOX2a(2)                                                                    --------->CCA1(2)                                                                    <------ZmHOX2a(2)                                                                   --------->AGP1                                                                   <---------AGP1         <---------MYB46(3)                                        <---------ARR14(2)      <---------MYB46(3)                                           <---------ARR11(3)   <-----------RAV1(1)                                      <<<<<<<<<TBF1   --------->DAG2          < -------->ARR14(2)                                    <<<<<<<<<TBF1--------->ARR11(3)              <- -------->GLK1(2)                                  <<<<<<<<<TBF1   --------->ARR14(2)              -- ---------ARR14(2)                              <<<<<<<<<TBF1     <---------CCA1(2)<----------DOF2 -- --------GLK1(2)                         <---------YAB1  <<<<<<<<<TBF1     ---------->DOF2    -------   agaatctgttgttgttgaagacatattaacagagacttcaactatgtttcttcttcttcttcttcttcagatctgaataaagcgactttgttttagtaac  18647900        <----------DOF2     --------->ARR14(2)     <---------ARR11(3)     --------->ARR11(3)     <---------ARR11(1)     <---------ARR14(2)    <---------CCA1(2)                             ----------->RAV1(1) <-------TEIL                  --------->YAB1 <---------ZAT14 ------ZmHOX2a(2)    ---------->DOF2          <---------ZAT18                 ------------>CBF     <- --------ARR14(2) --------->ANAC58<---------GLK1(2)                <------ZmHOX2a(2)        <-------- ------->AGP1     *TSS       --------->GLK1(2)--------->ZAT18     --------->ARR11(3)    <------------CBF ------->ARR14(2) --------->ANAC46<---------ARR14(2)              <---------ARR11(3) >>>>>>>>>>>>>>>> -->MYB52(1)      --------->ANAC58--------->ARR14(2)    --------->AHL20(2)   ----------->RAV1(1)  ---   agatccatatctttatttacaaggaaagaagaatcagatttgttagagtggacaacaaatatttagtagatcatatggacaacaatagcccattgtcatt  18648000                                                                                           ----------                                                                                           ------>ZmHOX2a(1) <------------CBF                                --------->AHL20(2)                 --------->AHL20(2) --------AHL20(2)  --------->ATHB12              <---------AHL20(2)          --------->HSFB2a(2)    < -YAB1     ----------->GT1                 <---------TOE2(3)     --------->YAB1     <---------AHL20(2) >LFY    <------------CBF         <---------YAB1--------->AHL20(2)           <---------HSFB2a(2)    - ------>AHL20(2)  <-------TEIL  <-----------GT1 <---------AHL20(2)---------->DOF2  --------->AHL20(2)   ttaaattggcatattgtaaattcatttgactaaattactatagttaagaatttaatttcattttcaataaaagttttttctacaaattaattcctgtaaa  18648100                                                                          <---------ANAC46                                                            <---------ARR11(3)     <---------ICU4                                         --------->AHL20(1)     -------->HAHB4                ------>ZmHOX2a(1)        <---------AHL20(1)     <---------AHL20(2)        <-----------GT1              --------->ARR11(3)    <---------YAB1         <---------AHL20(1)             --------->ARR11(3)    --------->ICU4         --------->AHL20(1)             <---------AHL20(1)    <---------ATHB51       --------->ARR11(3)             <---------ARR11(3)    --------->ANAC46 <---------AHL20(2)        <---------ARR11(3)             --------->AHL20(1)--------->DOF5.7(2) --------->AHL20(2)      <---------AHL20(1)              --------->YAB1  ---------->ID1 <---------YAB1          --------->ARR11(3)        <-----------GT1   <---------ANAC58 ->GT1                   --------->AHL20(1)   --------->AHL20(2)     <---------ANAC58 ---------AHL20(2)       <---------ARR11(3)   <---------AHL20(2)   <-----------GT1 -------->AHL20(2)      --------->YAB1       --------->AHL20(2)<---------AHL20(2)     --------->TOE2(3)   attttaattattctattcatttacaaaaatatttttcctcaccaaaaaaaaatttacaaaaatattttttgacttgtcgtttactcaacattagtttcaa  18648200            --------->At5g28300           ----------->GT1         --------->SPL7                    -------->ZAP1       ----------->HVH21                 <---------WRKY18(1)                                 --------      --------->LBD16               ------->TEIL                                             <-------     <---------LBD16            --------->ZAT18                                           --------->AHL20(2)    <---------LBD16             <---------ZAT18                  ---------->DOF2--------->ZAT14     -   --------->MYB52(1)          --------->ALFIN1              ------->TEIL<-------TEIL     <---------AHL20(2)   aaaaaaaccgggacggtaaaattgatggtaagagtgtgcatcttgaccgatttgaaccaattgaacccaaagagattcaaactgaactaaaattatatgt  18648300                                                                ------>MYB46(1)                                                                ------>MYB83            <-----------GT1                                     --------->ARR14(2)       --------->GLK1(2) ------->AtSPL8<---------DAG2 ---------->DOF2              <-----------GT1       <---------MYB52(1) --------AtSPL8--------->TOE2(3)     <-------GAMYB<---------YAB1<---------ARR14(2)   <------ZmHOX2a(1) -------->ANAC46<----------DOF2     ----------->GT1    --------->ATHB12     --------->MYB52(1)   acaaaccatgtgattaacctttttttttttttgaaagagggttaattcaaatatgagtgattaacctatcttcgacccaaacggttaggagaatatatgt  18648400  Previous    Next  AGI:  At5g45940.1    Description:  ATNUDT11 (Arabidopsis thaliana Nudix hydrolase homolog 11); hydrolase. Identical to Probable coenzyme A diphosphatase NUDT11 (NUDT11) [Arabidopsis Thaliana] (GB:Q8LET2;GB:Q9FJ42); similar to ATNUDT15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15), hydrolase [Arabidopsis thaliana] (TAIR:AT1G28960.5); similar to ATNUDT15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15), hydrolase [Arabidopsis thaliana] (TAIR:AT1G28960.3); similar to ATNUDT15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15), hydrolase [Arabidopsis thaliana] (TAIR:AT1G28960.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66348.1); contains InterPro domain NUD Range:  from: 18646789    to: 18647918    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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