Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------SPL7                           <---------HSFB2a(1)    <---------ZAT2                  <-------TEIL------->TEIL        --------->At4g35610                 --------->CCA1(2)                --------->ZAT2                 --------->ARR14(1)   <---------ZAT14                --------->ARR11(1)    --------->ZAT14                --------->ARR14(2)    --------->ZAT18    <---------MYB52(1)    <---------------AtSPL3  <---------At4g35610                     <---------At4g35610 -->ATHB12      <---------ARR14(2)    <---------ZAT18      --------->ANAC46     <-----------GT1 --ATHB12<----------DOF2  <---------KAN4(2)     <-----------RAV1(2)         --------->YAB1<---------ZAT18 -ARR11(1)     <---------GLK1(1) <---------MYB52(1)      <---------ATHB12   --------->AHL20(2)   tcgtccgtaagctttggagatacggtggaatgtacggtagtccactagcctcagctgcaataagtcacaaaatacaaattataaacattttgtgctcata  18639100                                                                   <---------ICU4                                                                <---------ICU4                                                                --------->ATHB51                              <---------AHL20(2)             --------->TOE2(3)                             <---------AHL20(1)          --------->GLK1(1)                             --------->AHL20(1)         <---------MYB52(1)                             <---------AHL20(2)        <-------GAMYB--------->AHL20(2)    <---------YAB1                             --------->AHL20(2)      <---------ANAC46                  <-------------                            --------->YAB1           <---------TOE2(3)       --------->YAB1 ---------              <---------AHL20(1)                     <---------TOE1(3)      <---------AHL20(2)      -              --------->AHL20(1)                    <---------At5g28300     --------->AHL20(2)     <-       ----------->GT1  --------->AHL20(2)         <-----------GT1--------->ICU4       -------------- <-------TEIL --------->ARR11(3)<---------TOE2(3)  --------->MYB52(1)      --------->AHL20(2)--------   agtttcattttgtgaaaatattgatttttaatataatgttttgctccatcaaattacggttatccataatttttatatttaataatctacttataaaagt  18639200                                                                                          -----------            <---------AHL20(2)                                                           ----------->GT1      --------->AHL20(2)                                                             <---------SPL7      <---------AHL20(2)                                          <-----------HVH21--------->ALFIN1 <---------AHL20(2)                                             --------->SPL7--------->MYB52(1) --------->AHL20(1)                                             <-------TEIL ------->GAMYB--------->At5g28300 <---------AHL20(1)                                          <---------TGA1a----------->HVH21 --AGL15   --------->AHL20(2)                                <---------O2   --------->DEAR3(1) ->DOF2    <---------AHL20(1)                                ======================================== -------->AHL20(2)                                           ========================MYC_MYB --------YAB1                                                --------->O2   --------->MYB46(3) ->AGL15   <---------AHL20(2)                                --------->TGA1a<---------MYB55(2)    <-- ->DAG2<---------AHL20(2)                             --------->YAB1        <---------MYB52(2)  -----   gattatattttaatttttttgagagagagtgatgagaagtaaaccgatgaaatcgatgatgagacgtccgtcagagcaacgaccggtggaacggttaaaa  18639300             <---------MYB52(1)           --------->ANAC58          --------->SPL1(2)          --------->SPL7         <---------SPL1(1)         --------->SPL1(1)         <---------MYB52(1)        <---------SPL7                                --------->AHL20(2)        <---------SPL1(2)                             --------->YAB1       <---------ANAC58                            ----------->GT1<---------MYB52(1)           ------       <---------ANAC58                            --------->YAB1--------->LBD16             <-------    ------------------>SPL14                   --------->LBD16 <---------ANAC46             --------- >GT1 <---------------AtSPL3                 <---------LBD16   <---------LBD16         --------->ICU4 ======bZIP_DOF                         <---------ICU4<---------AHL20(2)   ---------->DOF2 --------->AHL20(2) -------TOE2(3)         <---------TOE1(2)<-----------HVH21   <---------ARR14(2)<---------GLK1(2) <--- ----->DOF2--------->ANAC58          <---------WRKY38(1)---------->DOF2  <----------DOF2   <---------AHL20(2)   aaggtttgtccgtacggtagtcttccaatgttcggagagtcaacatcaccggataataaaaagtttccggtatcgcttaaagaatcgccaaaattaaaga  18639400                 <------MYB83                 <------MYB46(1)      <---------TOE1(2)                                                                      -------- --->ATHB12     <---------AtMYB61    ------>MYB83                                        <---------AHL20(2) --TOE2(3)   <---------ZAT6          --------->MYB52(1)                             <---------YAB1 ->DOF2 <----------DOF2              ------>MYB46(1)              <---------YAB1<---------GLK1(2)  <- ------WOX13(1)<--------P          <---------MYB59   --------->YAB1       --------->ARR11(3)<--------   ttgactcgtactttagagttggtctcatcggtaatgaccgaacagagactaaaaatgagaatgccactatgaataacatattgattctcattttatgatt  18639500                                                                               <---------AHL20(2)                                                                            --------->AHL20(1)                                                                            <---------AHL20(1)                                                                         --------->AHL20(2)                                                                       <---------YAB1                                                                      --------->TOE2(3)                                                      <-----------TBP-------->ATHB1                                                    <-----------TBP  --------->YAB1                                               ----------->GT1       <--------HAHB4               ---                                            ---------->DOF2          --------->ATHB12             <--                                         --------->HSFC1(1)          <---------ICU4         --------- ->ATHB12                                <---------HSFC1(1)         --------->ICU4          <-------- ---------DOF2         <---------MYB52(1)<---------HSFB2a(2)       --------->GLK1(2)--------->MYB52(1) -YAB1     <----------DOF2  *TSS         --------->HSFB2a(2)  ---------->DOF2  ----------->TBP <-----   tctttttttttttctttcaaattcagttatttcatgggtatttcgagaaaggttttatatataagaaagaatcattaatatataaaaaacggtgatgatt  18639600 ------>HSFB2a(2)              <---------AHL20(2) -------HSFB2a(2)        <-----------GT1              <---------GLK1(2)<---------AHL20(2) >ICU4             --------->TOE2(3)             <-----------GT1     <----------DOF2                < -YAB1            <---------ANAC55(2) <---------HSFB2a(2)         <---------TOE1(3)               --- ----YAB1         ----------->GT1     --------->HSFB2a(2)--------->TOE2(3) --------->YAB1        <---   ctagagactaatcttacaaaacgtaaataacattttttttctgtaacgttgttacagtttcttaatttaagctttaattgtaaaccagagcatatgttta  18639700                         --------->ATHB12                         --------->ATHB51                                           <---------ANAC58          <---------REM1(1)                                                         <---------ANAC58    <-----------RAV1(1) <---------YAB1                                  --------->GLK1(2)   <---------TOE2(3)    --------->ICU4                     --------->YAB1          --------->MYB52(2) ---------YAB1       <---------YAB1                       <---------ATHB12       <---------MYB52(1) ------>ATHB12    <---------YAB1           --------->GLK1(2)    ----------->GT1<---------ANAC58  ---- ------YAB1    --------->ICU4<---------MYB46(3)         --------->WOX13(1)     <---------ANAC58  <---   tgattaatgttgttgtagttattgttattattggttgaaactgagagtctgagagtggcaatcacatagaaaataatctatgcgttacttacataagtgt  18639800                                                                                         <------MYB83                                                                                         <------MYB46(1)                                                                                        --------->MYB55(2)                                                                                 --------->ATHB12                                                                                 <---------MYB46(3)                                                                              <------MYB46(1)                     ------->TEIL                                             ----------->GT1                     <-------TEIL                                             <---------DEAR3(2)                  <---------ANAC55(2)                                         <------MYB83                  <---------ANAC46                                           <---------MYB46(3)                  <---------ANAC58                                           <---------DEAR3(1)                  --------->ANAC55(2)                                        --------->MYB46(2)         ----------->GT1                                                     <---------DREB2C(2)     --------->AHL20(2)     --------->ARR11(3)                               <---------DEAR4(1)     --------->AHL20(1)   <---------TOE2(3)                            ---------->DOF2  <---------MYB46(3)     <---------AHL20(2)   --------->DAG2                             <---------YAB1<---------YAB1 ----->ETT(2)     <---------ANAC58                       <-----------GT1    <---------ORA47(1) ------ETT(2)   <-----------GT1               <---------YAB1      <XXXXXXXXXXXXXXXXXXXXMIR839--------   cgacaaataaaatgttatttacgtacataaggtattgtatgtctatctatgagtgtatttcacaataaaccatgaaaggtcggtgattagtgggtgaaag  18639900                         <---------AHL20(2)                         --------->AHL20(2)                   --------------->AGL15           ---------->DOF2                   <---------DAG2           --------->YAB1                                          -                   <----------DOF2       ----------->RAV1(1)                                       <-                <-----------GT1        --------->LBD16                                             --             <---------DAG2           --------->ANAC46                                  --------->At4g35610             <----------DOF2   <---------YAB1 --------->AHL20(2)                        <---------At4g35610     <---------ZAT18    <---------AHL20(2)------------>CBF   <----------DOF2          *TSS     ------ -->DOF2  <---------ALFIN1    <---------TOE2(3)--------->AHL20(2)               <------ZmHOX2a(2)----   catttagtgcatccacttttactttatttatttatgtttcccccaacaataaataaagcatttctttactaaatcaaacacgatcacttcagcaaaacca  18640000  Previous    Next  AGI:  At5g45910.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to ARAB-1 (Arabidopsis lipase), carboxylesterase [Arabidopsis thaliana] (TAIR:AT1G28670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48084.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 18637526    to: 18639528    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g45920.1    Description:  carboxylesterase. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G62930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48092.1); contains InterPro domain Esterase, SGNH hydrolase-type, subgroup; (InterPro:IPR013831); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087); contains InterPro domain Esterase, SGNH hydrolase-type (InterPro:IPR013830) Range:  from: 18639986    to: 18642012    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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