Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ------>MYB46(1)                                                                       <---------MYB59                                                                       --------->MYB46(3)                                                                      --------->ANAC58                       <-----------HVH21                              --------->ANAC46           <---------ARR14(2)                                 --------->HSFC1(2)    --------->CCA1(2)<---------ARR11(3)                       <---------HSFC1(2)  <---------GLK1(1)  --------->ARR11(3)                    ---------->DOF2 --------->GT1   ---------->DOF2       <------ZmHOX2a(1) --------->AtLEC2------>MYB83 --->DAG2  --------->ARR14(2)--------->YAB1       <---------ANAC58    --------->ANAC58 --->DOF2 <------ZmHOX2a(1)<---------TOE2(3)      <---------ANAC58  <-----------GT1                <-   gtggatatatgaggattcaaaaagatgtcaaggataaacaaggactatgtggtcttgccatgaaagcttcttacccaactatatgaattcaaaaccgtgt  18632000                     <---------ANAC58              ------->TEIL                 --------->AHL20(1)           <---------ANAC46                --------->AHL20(2)     <---------AHL20(2)     <---------YAB1  <---------ANAC58      <---------AHL20(2)     --------->AHL20(2)     <---------AHL20(2)                   --------->AHL20(2)      --------->AHL20(1)     --------->AHL20(2)     <---------WOX13(1)                   <---------AHL20(2)           <------  <----------DOF2    <---------ANAC46     <---------AHL20(2)     --------->AHL20(2)        ------->TEIL --------TOE1(3)     <-----------RAV1(1)--------->YAB1     ----------->GT1        <-------GAMYB    <-   taagcttttaattgtgtatgtttgtgtgggattgatgtctaaaaataatttgaattgttttatgtaaaaaaattgtatttagactgttgtatgcatttta  18632100                             --------->YAB1                                                         -                            ----------->GT1                                                         -                         <------ZmHOX2a(1)                                                         <<             --------->ANAC55(2)                                                           ------->MYC2        <---------At4g35610<---------WOX13(1)                              ----------->GT1 <-------MYC3 ---AHL20(2) <---------ANAC55(2)                               ------->GAMYB               <-------MYC2 --------AHL20(2) --------->AtLEC2               <----------DOF2      <---------STY1(2)    ------->MYC3   tgaaattgtaagcttatgtaatgcaaaggattgataattttcgaaatgtttctttcaaatttcaacggtattagctagggataatttgaagcatatgcac  18632200                     --------->YAB1                                                          <------MYB46(1)            --------->ANAC58                                                             --------->ARR14(2)            --------->ANAC58                                                             <---------ARR14(2) -------->YAB1   --------->ICU4    --------->AHL20(2)                              <-----------GT1 -------->AHL20(2)  ----------->GT1<---------AHL20(2)                          --------->YAB1<------MYB83 <<<<<<<ARR2----------->GT1 ----------->GT1              <-----------GT1    ----------->GT1 ---------   aatcaaattccaccaagtaaaaatgaaaatttgttaaaaaaatgaagtttgaaaactcttaaccatttactgagaagactgtaataaaccgaatttggtt  18632300                               --------->LBD16                             --------->SPL7                                                     <----                           <---------SPL7                                                       -----                           <-----------HVH21                                                  <------                         --------->DEAR3(2)                                                   -------                         --------->MYB46(3)                                               <---------RAP2.6(3)                         --------->HSFC1(2)                                               ------>NtERF2                         <---------HSFB2a(1)                                             --------->RAP2.6(2)                         --------->HSFB2a(1)                                     --------->CCA1(2)<--                         <---------HSFC1(2)                                <---------ANAC58  --------                        ------->TEIL                                       <---------ANAC46  --------                  <----------ID1        <----------DOF2             <---------AtMYB61    --------->DEAR3(1)                ---------->DOF2----------->GT1       --------->AHL20(2)    <---------AtLEC2<---------ARR14(2)           <---------TOE2(3)<---------MYB52(1) <---------DAG2    --------->ARR14(2)     --------->DEAR3(2)     <---------------AGL15--------->DEAR3(1)   <----------DOF2   <---------ARR14(2) ---------->DOF2 - >MYB59 <---------YAB1 <---------ARR14(2)   <-----------GT1<-----------GT1 <---------ANAC58--------->ARR14(2)   cagtttgatttttatggaaaaagacgaaccgtccggttaatgctttttacttttttaaaataaaccggttttggtttgcttggatataaagccgacccga  18632400     <---------WRKY18(1)    --------->WRKY38(1)   <---------WOX13(1)  <------------CBF          <----------DOF2  --------->ARR14(2)        <---------DAG2  <---------ARR14(2)  <---------ALFIN1 -----ARR14(2)       --------->ANAC46            *TSS ---->ARR14(2)       --------->ANAC58          <---------MYB52(1) ---ETT(1)           --------->ANAC58         <-----------TGA1 ---->HVH21        <---------AtLEC2           <-----------HVH21 -------LBD16  <---------ANAC58              --------->ANAC46             <---------WOX13(1) ->MYB46(3)    <---------ANAC46         <---------MYB52(1)              --------->ATHB12       <----- ->DEAR3(2)   --------->MYB52(2)    <---------At5g28300                <-------TEIL      --------->YAB1 -------->LBD16<---------ANAC58    <-----------GT1           <----------DOF2        ------>ZmHOX2a(1)   cccggattgaccatgttccttgcacgactcctttttctcaccgttctccgtcatcgtcttcttctttctcacattcattgactctcctccataataaaca  18632500                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                      <---------ETT(2)                                                                                      <---------DEAR3(1)                                                                                      --------->DEAR3(1)                     <------ZmHOX2a(2)               --------->YAB1                 --------->LBD16                    <---------ARR11(3)            --------->WOX13(1)               <---------ANAC46                    --------->ARR11(3)         --------->ANAC58                    <---------ANAC58                  ----------->ARR10     <---------GLK1(2)                          <---------ANAC58                --------->CCA1(2)   ---------->DOF2 <---------ATHB12            --------->ARR14(2) ----ICU4  ---------->DOF2     <---------ANAC46--------->ANAC58                 <---------ARR14(2)   ttgcaatctctcagaaagataagatcagccatggctgagaaagaaactccagcaatcatacttcaattcgctccattgaacagttccgtcgacgaaggtt  18632600       <---------ANAC58                                                  --------->ANAC58       <---------ANAC58                                                  --------->ANAC58       <---------GLK1(2)                                                 --------->ANAC46     <-----------ARR10                                           --------->LBD16 ->HSFB2a(1)                                                   <---------LBD16 --HSFB2a(1)                                                --------->MYB46(3) -TOE1(2)                                    <---------GLK1(2)--------->MYB52(1)       --------->AHL20(2) -TOE2(3)       <----------DOF2            <---------YAB1   <---------ATHB12   --------->YAB1 -TOE2(2)     ------>ZmHOX2a(1)  <---------LBD16          --------->WOX13(1)  <---------ATHB12   tctggcatagcttctcctctttgaaactcgacaaactcggaatcgatgattctccgatttcaatcaccggtaaacacacaatcatcgaattaaaaaatca  18632700                                                                        ----------->GT1                                                                        --------->ANAC58                                                              <---------TOE2(3)                    <---------AHL20(2)                        <---------TOE1(3)                    <---------YAB1                            --------->MYB59                 --------->AHL20(1)                        <---------MYB52(1)      --------->DAG2   <              --------->AHL20(2)                        ------>ZmHOX2a(2)         ---------->DOF2   <            --------->AHL20(2)                      <---------YAB1      --------->ANAC58            -     ------->TEIL<---------AHL20(1)           <---------ARR11(3)    <---------HSFB2a(2)             -   tccaatgcatcgatttttatatattattcgatgagtctatgcattcgagctcttatgatccgtttaggttagagaagcaaaaaaaaaagttgaaaacttg  18632800                                               --------->ANAC58                                               --------->ANAC58                                               ----------->GT1                                     <---------TOE1(3)    ------>ZmHOX2a(1)                <---------TOE2(3)              <----------DOF2    ==================================HOX2a_HOX2a                   --------->TOE2(3) ---------ARR11(3)                   --------->MYB59             --------->ARR11(3) ---------ARR14(2)                <---------MYB52(1)     --------->DAG2           <---------MYB52(1) -------->ARR11(3)             ------>ZmHOX2a(2)        ---------->DOF2 ---------->DOF2            -- -------->ARR14(2)         <---------YAB1  <---------HSFB2a(2)   <---------ARR11(3)               <--   aaaatcctctgttttctgggcaagttgttatgatccgtttaggttagagaagcaaaaaaaaagttgagaactttaaaagcctctgttttgtttagtagag  18632900  Previous    Next  AGI:  At5g45890.1    Description:  SAG12 (SENESCENCE-ASSOCIATED GENE 12); cysteine-type peptidase. similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT2G27420.1); similar to senescence-specific cysteine protease [Brassica napus] (GB:AAD53011.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201) Range:  from: 18630486    to: 18632157    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g45900.1    Description:  APG7 (AUTOPHAGY 7). Identical to Autophagy-related protein 7 (ATG7) [Arabidopsis Thaliana] (GB:Q94CD5;GB:Q9FJ46); similar to unnamed protein product [Vitis vinifera] (GB:CAO48070.1); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain E1-like protein-activating enzyme Gsa7p/Apg7p (InterPro:IPR006285); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Molybdenum cofactor biosynthesis (InterPro:IPR009036) Range:  from: 18632449    to: 18635787    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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