Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              -------                                                                                          --------->AHL20(1)                                                                                          <---------AHL20(1)                              --------->ATHB12                                            --------->AHL20(2)                             <---------YAB1                                           --------->AHL20(2)                    <---------AHL20(2)                                                <---------AHL20(2)                 --------->AHL20(2)                                                   <---------YAB1                 --------->AHL20(1)   <---------AHL20(2)                             --------->AHL20(2)                 <---------AHL20(2) <---------RVE1(1)                                <---------AHL20(2)                <---------AHL20(2) <---------GLK1(2)                             <---------AHL20(2)                --------->AHL20(2) --------->ARR11(3)                  --------->TOE2(3)  <---------AHL20(2)                <---------ATHB51   <---------ARR11(3)      --------->AHL20(2)   <---------AHL20(2)         <-----------GT1   --------->YAB1                  --------->YAB1       --------->AHL20(2)      <---------AHL20(2)   <---------ICU4               --------->WOX13(1)    --------->TOE2(3)<----- ------->DOF2   <---------ATHB12<---------WOX13(1)  ----------->GT1 <----------DOF2 --------->YAB1  <   aaaagtatttttttccaaataatttatactcatgatagattttttttttttgaaatgtcaattaaaaatgctttcttaaatattaattttaattaattaa  18630100        <---------AHL20(2)       <---------AHL20(1)       <---------AHL20(2)       --------->AHL20(2)       --------->AHL20(1)                                                                  <-------TEIL       <---------ARR11(3)                                                                 --------->CCA1(2)       --------->ARR11(3)                        <---------ARR11(3)                <-----------GT1  <------ZmHOX2a(1)                              --------->GLK1(2)           <---------AHL20(1) ----------->GT1                                 --------->ARR11(3)          --------->AHL20(2) ---AHL20(2)                       --------->ARR14(2)       --------->ZAT14  <---------AHL20(2) -->AHL20(2)                       <---------ARR14(2)       --------->ZAT18  --------->AHL20(1) ----AHL20(2) --------->AtLEC2    --------->GLK1(1)         <---------ZAT14 <---------AHL20(2) ---------TOE2(3)                 <---------CCA1(2)         <---------ZAT18 --------->AHL20(2)   ataaggaaatatatttatgcaaaacatcatcaacacatatccaacttcgaaaatctctatagtacacaagtagagaaattaaattttactagatacaaac  18630200              --------->AHL20(2)           --------->AtMYB61              <---------AHL20(2)          --------->MYB46(3)              <---------YAB1             ------>MYB46(1)                      <---------ZAT18            --------->YAB1               ------>MYB83                ---------->DOF2               <-     <---------ICU4                     --------->ANAC46         --------->LBD16                  <--     --------->YAB1                    --------->MYB46(3)    --------->ARR14(2)                <-----    --------->ICU4                  <-----------GT1          --------->GLK1(2)<---------ZAT14  <-----    <---------ATHB12              <---------AHL20(2)         <---------ARR14(2)            <---------GLK1(1) ------>ZmHOX2a(1)                --------->AHL20(2)--------->AHL20(2)        --------->ZAT18 <------   ttcctaatcatcaaatataaatgtttacaaaactaattaaacccaccactaaaattaactaaaaatccgagcaaagtgagtgaacaagacttgatttcag  18630300       <------ZmHOX2a(1)               <------ZmHOX2a(2)  <---------REM1(1)                  ------->GAMYB                         ----------->GT1 <---------TOE2(3)             --------->TOE2(3)  <---------ANAC46       <---------ANAC58 ------TEIL                   --------->YAB1      <---------ANAC55(2)    <---------ANAC46 ------P                ------->TEIL--------->MYB46(3)       ------->TEIL<---------ANAC58 ----TOE2(3)         --------->ANAC55(2)          <---------YAB1         <---------ANAC55(1) ----TOE1(3)         <---------ANAC46--------->YAB1   <---------YAB1<---------ICU4            ------- -----RAV1(2)        <---------ANAC55(2)         --------->MYB59   --------->ICU4          <---------   gttgatgtaggactaaaatggctacgtatcaaacatcaacgatcatttagttatgtatgaatgaatgtagtcattacttgtaaaacaaaaatgctttgat  18630400                                       <---------DAG2                                       --------->TOE1(3)                                     -------->P--------->ZAT6    --------->WOX13(1)               ------->TEIL      <-----------GT1  <------ZmHOX2a(2)              --------->TOE2(3)  ----------->TBP  ------------>CBF         --------->WOX13(1)  <-----------GT1       <---------ZAT18  *TSS -->ATHB12           --------->TOE2(3) --------->TOE2(3)         --------------->AtSPL8           --- -DOF2<---------ATHB12   ------------>CBF    <-----------GT1<---------ALFIN1         --------->YAB1   ttggatcaatcacttcatgtgaacattagcaattacatcaaccttattttcactataaaaccccatctcagtacccttctgaagtaatcaaattaagagc  18630500                                                         ---------->ID1                                            <---------ARR14(2)                                            <---------ARR11(1)                                            --------->ARR14(2)                                            <-----------ARR10           <---------ICU4                ------>ZmHOX2a(1)           --------->GLK1(2)          <---------YAB1           <----------DOF2                  --------->ARR11(3)       --------->YAB1        <-----------GT1     <----------DOF2 <---------ARR11(3)     <-----------GT1           <------- ------->DOF2  --------->TOE2(3)           <---------CCA1(2) <----------DOF2               <---------DAG2   aaaagtcatttaactttcctaaaacaatggctttaaaacatatgcaaatctttctcttcgtcgctatattttcatcattctgtttctccatcactctttc  18630600                                                                      <---------LBD16                                                                    <---------REM1(2)                                                                --------->REM1(2)                                                             <---------ANAC58                                                             <---------ANAC58                                                          --------->DEAR3(1)                                                         --------->ANAC58    ----------->HVH21    --------->ANAC46               <-------TEIL          --------->ANAC46 <---------ARR14(2)  <---------ALFIN1     --------->ANAC58               <---------REM1(2) --------->LBD16 --------->ZAT18       --------->AtLEC2     <---------MYB46(3)  <-----------ARR10    <------ZmHOX2a(1) <---------ZAT18       --------->ANAC58  <---------ANAC46--------->ANAC58 --------->ARR14(2) ---DOF2       ------->TEIL---------->DOF2 --------->ALFIN1 <---------DEAR3(1)    <------ZmHOX2a(1)   tcgtccactcgacaatgaactcatcatgcaaaagaggcacatcgagtggatgactaaacacggccgtgtctacgcggatgtgaaggaggaaaacaatcgc  18630700                                                              <----------DOF2                                                           <---------ARR11(3)                                                      --------->LBD16                  --------->At4g35610                                                     --------->HSFB2a(2)             --------->ZAT14                                                     --------->ATERF1(2)             <---------ZAT14                                                     <---------ATERF1(2)            <---------MYB52(1)                                                     <---------HSFB2a(2)   --------->At5g28300                                                    <---------LBD16       ----------->GT1                        --------->ANAC58           --------->MYB52(1)     --------->LBD16                        --------->ANAC58          ------>ZmHOX2a(1)      <---------ANAC46        ----               --------->MYB52(1)    <---------AHL20(2)    --------->ARR11(3)---------->DOF2   <----- <---------MYB52(1)  <---------SPL7  --------->AHL20(2)<------NtERF2    <---------LBD16<---------At4g35610   tacgttgtgttcaaaaacaacgtcgaacgcattgaacatttaaatagcattcctgccggaagaactttcaaacttgcggtaaatcagtttgctgatttaa  18630800                                                                                   <---------------AtSPL3                                                                                   <---------------AtSPL8                     --------->ZAT14                                               --------------->AtSPL8                     <---------ZAT14                                               <---------TOE2(3)           <---------ANAC58                                                        --------->MYB59       ------->TEIL  --------->ZAT18                                               --------------->AtSPL3 <---------ATHB12  --------->REM1(2)          <----------DOF2                   <---------MYB52(1) ----------->HVH21--------->AtLEC2          <------NtERF2  --------->ANAC58  <------NtERF2 ----->MYB46(3) <---------ANAC46     --------->ALFIN1      --------->ANAC58 ------>NtERF2 ------GT1 <---------ANAC58     ---------->DOF2          ---------->DOF2<-----------RAV1(1)   ccaatgacgaatttcgttccatgtacactggtttcaaaggtgtctcggcattatctagccaaagccaaactaaaatgtcgccgtttaggtaccaaaacgt  18630900                                                                            <---------ANAC46                      <-------GAMYB                                         ----------->GT1                 <---------ARR14(2)                                    --------->At4g35610                 --------->ARR14(2)                                    <---------At4g35610                <---------MYB52(1)                                     --------->ZAT2               <---------DEAR3(2)              ----------->HVH21       <---------ZAT2             <---------LBD16     <------ZmHOX2a(1)                     --------->ATERF1(1)         <----------DOF2 <---------WRKY18(1)  <-----------HVH21        ----------->RAV1(2)        <---------ANAC58--------->WRKY12   --------->At4g35610         <------NtERF2        <---------ANAC58--------->WRKY38(1)<---------ZAT2         --------->ANAC58      <---------ARR11(1)   <-----------RAV1(1)<---------At4g35610  <---------At4g35610    --------->ANAC58      --------->ARR11(3) ----------->RAV1(2) <-----------RAV1(1)   --------->ZAT2     --------->GLK1(2)        <---------CCA1(2) ================================RAV ---------->DOF2    <---------ATHB12  <---------LBD16  <---------   ttcttctggtgctttgccggtttctgttgactggaggaagaaaggagctgtgacccctatcaagaatcaaggcagctgcggtataactcaaatctttatt  18631000  Previous    Next  AGI:  At5g45890.1    Description:  SAG12 (SENESCENCE-ASSOCIATED GENE 12); cysteine-type peptidase. similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT2G27420.1); similar to senescence-specific cysteine protease [Brassica napus] (GB:AAD53011.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201) Range:  from: 18630486    to: 18632157    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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