Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------ATHB12                                                        <---------At4g35610           --------->MYB46(3)                                            <---------ALFIN1                        ------>MYB83                                           ------>NtERF2--------->At4g35610         ------>MYB46(1)                                          <---------ALFIN1                       --------->ANAC46                               <----------DOF2      --------->LBD16            <-----------GT1                               --------->TOE2(3)    --------->HSFB2a(2)  <---------TOE1(3)          -                         <-----------GT1  --------->DEAR3(1)             <---------TOE2(3)         <X ---->TOE2(3)         <---------ICU4     --------->MYB46(3)       <---------ATHB12  --------->MYB52(1) -->ICU4         --------->TOE2(3) <---------At4g35610 <---------ARR11(3)<---------YAB1          ----   ttaaaaactaaaactataatctaaaaattacaactttagatgagccaccctctccgagagcttagccaatgacttaagattaaacccaacgattgtatca  18621400                                                                                               ------                                                                                               ------                                                                                           <---------MYB52(2)                                                                                           --------->MYB46(3)                                                                                         ----------->RAV1(1)                                                                                        <------NtERF2                                                                                       <---------ATERF1(1)                                                                                       --------->ABI4(1)                                                                                       ------>NtERF2                                                                                      --------->ANAC58                                                                                      --------->ATERF1(2)                                                                                      --------->RAP2.3(2)                                                                                      <---------ATERF1(2)                                                                                      --------->DEAR3(1)                                                                                      --------->ANAC58                                                                                      --------->RAP2.3(3)                                                                                      --------->ANAC46                                                                                      --------->RAP2.6(2)                                                                                      --------->RRTF1(3)                                                                                      --------->DREB2C(2)                                                                                      --------->RRTF1(2)                                                                                     --------->ATERF1(1)                                                                                     --------->RAP2.6(1)                                            ----------->RAV1(1)                      --------->RRTF1(1)                                            <---------ALFIN1                         --------->ERF1                                           --------->ANAC46                          --------->ORA47(2)                                         --------->ANAC46                            --------->RAP2.3(1)                                        --------->MYB46(3)    <---------ALFIN1      ------>NtERF2                                 ------>NtERF2                --------->DEAR3(1)    --------->At4g35610                                 --------->LBD16             <---------MYB55(2)     --------->LBD16                                <---------ATERF1(2)          --------->MYB46(3)     <---------ATERF1(1)           --------->ARR14(2)   --------->ATERF1(2)        --------->DEAR3(1)     --------->MYB46(3)           <---------ARR14(2)   --------->HSFB2a(2)        <---------ALFIN1     <---------ARR14(2)         <---------DEAR3(2)     <---------HSFB2a(2)        --------->AtMYB61    --------->ARR14(2)     <---------O2              <---------LBD16            --------->MYB46(3)    <---------ARR11(1)     --------->O2              --------->SPL7 --------->ANAC46--------->AtMYB61<---------CCA1(2) --------->DOF2------>ZmHOX2a(1)--------->ANAC46        --------->ANAC46      --------->LBD16  ------ XXXXXXXXXXXXXXXXXXXXMIR447C   --------->RAP2.6(3)      <---------ALFIN1   ------>ZmHOX2a(1)   ------ ----->At4g35610  ------>ZmHOX2a(1)<---------ALFIN1--------->ZAT6--------->DEAR3(1)--------->ANAC46   gcaaaagacgtcgtttcctcctcactatttccttccggcacatccaccacataactctccaccaccaccgtcttctcctccgtatccgccgccacaaacg  18621500                                                       <---------ICU4                        ------>MYB83                   --------->YAB1                        --------->MYB52(1)            <---------YAB1                   <-----------GT1                  <---------ICU4       --------->ETT(2) ------>MYB46(1)            <---------ATHB12 --->ANAC58    >>>>>>>>>GT-2  --------->YAB1       --------->ICU4 ->GAMYB     <---------MYB52(1)               --------->YAB1                                     <--- --->ANAC58  --------->At5g28300    <---------ALFIN1--------->YAB1                 <---------At4g35610 --->ANAC46 ----------->GT1  <---------YAB1--------->YAB1   <---------ANAC55(2) <-------TEIL     ----   ccatcgttttcgaccggtaattaaccaaacgatgatcaccacctataatgctaatcatcatcacatgagactcatcgtcaagttcatctaatctctctcg  18621600                                      ----------->HVH21                                      <---------SPL7                                     --------->ANAC58                                     --------->ANAC46                                     --------->ANAC58                                    <---------LBD16                                   --------->MYB52(1)                                  <---------ZAT14                             <---------MYB52(1)                            <-----------HVH21                            <-----------TGA1                           --------->DREB2C(2)                    --------->ZAT2                        --------->AtMYB61     --------->HSFB2a(1) <---------ZAT2      --------->ANAC46               --------->MYB52(1) <---------REM1(2)               --------->At4g35610 --------->ANAC58       --------->At4g35610 --------->ANAC46   <---------HSFB2a(1) <---------At4g35610 --------->ANAC58       <---------At4g35610 --------->DEAR3(1) <---------HSFC1(2)<------NtERF2  <-------MYC2       --------->LBD16 <---------MYB55(2) <---------ATERF1(1)  --------->LBD16 ------->MYC3  <---------GLK1(1)    --------->MYB46(3)<---------DEAR3(1)   --------->DEAR3(1)    <-----------GT1  --------->GLK1(1)    <---------ABI4(2)--------->SPL7       <---------LBD16   <-------MYC3 ------At4g35610  --------->LBD16 --------->ZAT14     ------>ZmHOX2a(1)        ------->MYC2  <------- ----->At4g35610<---------LBD16 --------->O2 ------>NtERF2 --------->DEAR3(1)<---------TOE1(2)   gctgaactccgctggaagaccggaaaccaccgtcacttcacggacggagccttctcctccatcgccggagcttagattgcacgttttcacgaattgtttg  18621700                                                                                          <---------CCA1(1)                                                                                          <---------RVE1(1)                                                                                         <---------ARR11(3)                                 <---------MYB59                                        --------->YAB1                              >>>>>>>>>>WRKY43                                     --------->TGA1a                              <-----------GT1                                      --------->ANAC58                              >>>>>>>>>>WRKY26                                     --------->ANAC58                              >>>>>>>>>>WRKY38                                --------->MYB46(3)                  --------->DEAR3(1)                                        --------->ARR14(2)                  --------->TOE2(2)                                         <---------ARR14(2)        <-------GAMYB<---------ANAC46    <---------ZAT6                     --------->TCP20 <---------ANAC58--------->DEAR3(2)------>MYB46(1)                       --------->ALFIN1--------->ARR11(3) <---------ANAC58--------->MYB46(3)------>MYB83--------->ALFIN1        <---------ANAC46<---------YAB1 --ANAC46   <---------YAB1   --------->WRKY38(1)     --------->GLK1(2) <---------ZAT6 <---------TOE2(2)   taggcttgagggttatcaaaccgacgtagaattgaccaaactagagatagtggagcatctatagtttgtactagtgtggaaccgcacgtatgatattttt  18621800                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                <------------CBF                               <---------ANAC58            <---------At4g35610    <-----------GT1                        <----------DOF2     <---------ANAC58            <---------HSFC1(2)  --------->HSFC1(2)                       ------>ZmHOX2a(1) <---------ANAC46              --------->HSFC1(2)  <---------HSFC1(2)                    ---------->ID1 <---------MYB52(1)          <----------DOF2---  --------->HSFB2a(1)               <------------CBF  <-------GAMYB    <---------ARR14(1)  --------->HSFB2a(1)  <---------HSFB2a(1)          <---------TOE2(3) --------->ETT(2)----------->HVH21--------->TOE2(3)   gagaagtttccatttgtgtattgctgtttttttgacgaaattgtccttttatcgaccgttgttttgtgtgacagtatcttcaaacctttttgaagcttcc  18621900                              --------->ARR11(3)                              <---------ARR11(3)                             --------->CCA1(1)                  <---------AHL20(2)                                                               --      <---------ZAT6         --------->RVE1(1)------>NtERF2                                       --- ------>AtLEC2  <-----------TBP       ------------>CBF --------->AHL20(2)     ---------->ID1   <-----   atgcattagtgttcgagtatttatacgagaaatatctaagaacaatgccgactaaaaaaaaatatgagttgtcattttttggtgttttctgcaaaatatg  18622000                                                                         <---------AHL20(2)                                                   ---------->DOF2      --------->AHL20(1)         <---------ANAC55(2)                  ----------->GT1           <---------AHL20(1)         --------->ANAC58                    <---------YAB1          <-----------TBP       ---------- --------->GT1                         --------->TOE2(2)         ----------->GT1---------->DOF2 ---->TEIL           <----------DOF2   --------->TOE1(2)----------->GT1<---------AHL20(2)<----------- ----YAB1--------->ANAC58  --------->ATHB12  ----------->GT1 ---------->DOF2 <---------AHL20(2)   aatgtaatatcaagtaagaaaaactttgttgatttgtataacataagatgataaaaagaagtttaaagtgtatatatattttaaaagaatacattgtaat  18622100                                                   <------ZmHOX2a(1)      <---------AHL20(1)                                               <---------ZAT14            <---------ARR11(3)                                           <---------ICU4                 --------->AHL20(1)                             ---------->DOF2   --------->ZAT14   ----------->GT1    <-------MYC3 ------->TEIL            ---------->DOF2--------->WOX13(1)     <-------MYC3         ------->MYC3 ->GT1               <----------DOF2  <---------WOX13(1)       ------->MYC3--------->CCA1(2) -CBF         --------->AHL20(2)    --------->ATHB12   --------->ALFIN1   --------->ARR11(3)   atgcacataaaaccaaaaaaatgctttaaaagaaagactgattaatcagtgtaggatgtgtagcatatggtgacaatatataggcatatggctacatatt  18622200                       ----------->GT1                   --------->AHL20(2)                   --------->AHL20(1)                   <---------AHL20(1)                   <---------AHL20(2)              --------->AHL20(2)              <---------AHL20(2)          <---------AHL20(2)         --------->AHL20(1)         --------->AHL20(2)                             <-----------TGA1         <---------ARR11(3)                             --------->TOE2(3)         <---------AHL20(2)                            <---------bZIP60(1)         <---------AHL20(1)                            --------->ANAC55(2)         --------->ARR11(3)                            --------->bZIP60(1)        --------->AHL20(2)   <XXXXXXXXXXXXXXXXXXXXMIR2111A/B      --------->ICU4  <-------GAMYB     -  --------->LBD16 --------->AHL20(2)      ----------------------->TaNAC69(2)     ----------->GT1<---- ----------->GT1  <---------AHL20(2)    ------->TEIL <-----------GT1        ------->TEIL       ------   tgtccgtaaaatatatttaaataaattgtaaactttagaatgcacatttgttttgtaacgtcattgtaatgaagaatgtatttcggttaaatttggaggg  18622300  Previous    Next  AGI:  At5g45860.1    Description:  Bet v I allergen family protein. similar to Bet v I allergen family protein [Arabidopsis thaliana] (TAIR:AT5G45870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48052.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72620.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916) Range:  from: 18621328    to: 18621813    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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