Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->ANAC46                                                                                       --------->ANAC58                                                                                     <-----------GT1                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)                                   --------->ANAC46                         <---------ARR11(3) ------>AHL20(2)                   --------->ANAC58                         --------->AGP1          - -->AHL20(2)                       --------->ANAC58                         --------->ARR11(3)      < >ANAC58                      <----------DOF2                              --------->GLK1(1)        < >ANAC46                <---------YAB1                                     <---------GLK1(1)        - >ANAC58   <------------------------ANAC81                           --------->MYB52(1)--------->ANAC58   ataaacaagaattggttttagtttttcttattctttcaagaaacagagcaaaaattttagttgaaacaaacttacagagatcttaattcactcaattgac  18614000           ---------->DOF2        --------->At4g35610                                                     ----------->RAV1(1)        <---------At4g35610                                              --------->ARR11(3)     --------->LBD16            --------->MYB46(3)                      <------MYB83   <---------LBD16             -------->P    ------>ZmHOX2a(1)          <------MYB46(1)           --- -------->ZAT2               --------->MYB46(3)                        --------->MYB59      --------- ---------At4g35610    ---------->DOF2   --------->GLK1(2)         --------->ATHB12      --------->YAB1 ---------ZAT2 --------->ARR14(2)       <---------GLK1(2)          --------->YAB1     --------->YAB1 -------->At4g35610------>ZmHOX2a(1)  <---------TOE2(3)       --------->ZAT14--------->AtLEC2    <---   taagctccggagctaaagttcctcccaaagaacaaccactaagattcctacaaaacaaaaccaatacactcattaggtcttgcaacaagaatcacaaaga  18614100                                                      --------->AtMYB61                                                      --------->MYB46(3)                                                      <---------MYB46(2)                                                      <---------MYB111(1)                                                     --------->ANAC46                                                     --------->ANAC58                                                     --------->ANAC58                                                   --------->ZAT6                                              <---------ANAC55(2)                                              --------->ANAC55(2)                                       --------->ETT(2) ------>MYB46(1)                               =========================bZIP_DOF                               <----------DOF2--------->TGA1a                               <---------DAG2 <---------TGA1a                           <---------ZAT18    --------->ANAC46               --------->ICU4                           <---------ZAT14    --------->ANAC58               <---------YAB1                           --------->ZAT14    --------->ANAC58             <---------ICU4                           --------->ZAT18    --------->ANAC55(1)          --------->YAB1                        --------->At4g35610   <---------O2                <---------YAB1  ---------->DOF2      --------->ARR14(2) <---------ALFIN1               --------->ARR11(3) -------->RAV1(1)      --------->GLK1(2) <---------REM1(2)               <---------ARR11(3) ->DOF2   <---------ICU4<---------At4g35610   --------->O2              --------->YAB1 --------->HSFB2a(1) -------ID1           <---------GLK1(2)<---------ETT(2) ------>MYB83   --------->ICU4  <---------HSFB2a(1)   caacaaaagaaaacattacttacagcatctgcactttattgtcgacacacgtaacaccaaaccaagaacagaaatgatcatgatcagaaacattccaatt  18614200                                                                           --------->ANAC55(2)                                      --------->GLK1(1)                    --------->ANAC55(1)                                     --------->ARR14(2)                    --------->ANAC58                                     <---------GLK1(2)                     <---------ANAC55(2)                 --------->YAB1    --------->LBD16                    <---------ATHB12                <------ZmHOX2a(2) --------->ANAC58                    <---------ATHB51               --------->ARR14(2) --------->ANAC58       ------>ZmHOX2a(1) --------->ANAC58               <---------ARR14(2) --------->ANAC46      --------->TOE1(2)  --------->ANAC46              <------ZmHOX2a(1)   --------->LBD16    <---------ARR14(2)--------->YAB1    --------->GLK1(1)            <---------LBD16     --------->ARR14(2)<--------ATHB1      <---------   tgcaagagttccatgaggatcagaatcaactcttgcccggaatttcaacaatacaaatcctacaaacattcaataatacgtaattcaaaaaccctttaaa  18614300                                 ---------->DOF2             <---------WRKY38(1)                     --------->ATHB12                        <---------WRKY12                       -                     <--------ATHB1                --------->ARR14(2)                   -------->HAHB4                    <---------YAB1                 <---------GLK1(2)                    --------->YAB1         ---------->DOF2     --------->GLK1(1)     <---------ARR14(2)                  --------->ICU4 -DOF2 --------->YAB1--------->YAB1            <---------LBD16                         <---------YAB1   caaaaacattcaaaagaacacaatgatagagatttcaaagttgttcaccttcggattcgagggacaacgaagaacgagattgaagagtaatgatcaagaa  18614400                                                --------->MYB59                                                <---------TOE2(3)                                          --------------->AGL15                                          <---------------AGL15                                         <-----------------AGL2                                         ----------------->AGL3                          ------>ZmHOX2a(1)                                         --------------->AGL15                          --------->TOE2(3)                                         <-----------------AG                    <---------RVE1(1)                                       --------->ANAC58                         <---------GLK1(2)  --------->ANAC58                     --------->ANAC58   --------->AtMYB61     <---------ARR11(3)  --------->ANAC58--------->ANAC58   --------->MYB46(3)  ------------>CBF       <---------ARR14(2) --------->DOF2   --------->ANAC58<---------ETT(2)     --------->ANAC46         --------->ARR14(2)   catgaagcaagagaattggaacccaattggattccatcgacaacccattttaggtatacaccaatgctatacaaaatcgccagattttttcctaaatgaa  18614500                                   <------ZmHOX2a(1)                                  <------MYB83                                  <------MYB46(1)                                <--------P                <---------WOX13(1)                          --------->ATHB12              --------->ATHB12                        <---------ARR14(2)             <---------YAB1                        --------->ARR14(2)             --------->ICU4                    --------->ARR14(2)     --------->AHL20(2) --------->GLK1(2)           <-------TEIL                     <---------------     <---------AHL20(2)<---------GLK1(2)           <--------P                      <-----------GT1   ----------->TBP  --------->ANAC46       <----------ID1<------------CBF     <------------CBF   cgaatataaaaatacaaacttcacagaatccttggtaggagaagaacgacgaggttgatgattgaacattcagggtctctcattgtttccagttttgcaa  18614600                                                    --------->DOF5.7(2)                                                    <---------MYB52(1)                                                   --------->TOE1(3)                              ------>ZmHOX2a(1)  --------->SPL7                              --------->ICU4 <---------------AtSPL3                 <----------ID1                      <-------TEIL       --------->MYB46(3)                  --------->LBD16                    --------->YAB1    <---------WRKY38(1)                    --------->HSFB2a(2)               ------------>CBF  <---------ATHB12<---------TOE2(2)           <---------HSFB2a(2)   --        --------->TOE2(3)   ----------------->AG <---------TOE1(2)           ------>ZmHOX2a(1)     -- --AGL1 --------->TOE1(3)   ----------------->AGL1 --------->TOE2(3)        <---------LBD16        --   actcataaaaccctaaaaacaatgttcatgtcctaatgagtcaacaactcgtacgttaattctcttcttcttgttaatcctggaaaaaaacaaatgccaa  18614700                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                   <--------ATHB1                                                   <---------ICU4                                                   --------->ATHB51                                                   --------->YAB1                                                   <--------HAHB4                                                  --------->ICU4                                                  <---------ATHB51                                                  <---------YAB1                                                  --------->AHL20(2)                                 --------->MYB46(3)-------->HAHB4              <---------KAN4(2)    <---------MYB52(2)        <----------ID1    --------->YAB1                --------->YAB1   ------ ------->ANAC58          --------->TOE2(3)     <---------ATHB51            --------->YAB1      ------ ------->ANAC58          --------->TOE1(3)     <---------ATHB12     ---------->DOF2 ------->GAMYB ------->ANAC46          <----------DOF2   ------------>CBF    --------->AHL20(2)<-----------GT1   caagaaacaaacaaacatatatcaaaactttaacaacaaatgtataccaataataattaaaccaaaaaaataaagaataagaataaccctcttgaagaag  18614800                         ------>MYB83                         ------>MYB46(1)                       <---------MYB111(1)                       <---------MYB55(2)                       <---------MYB111(2)                                           ---------->DOF2                       --------->MYB46(3)                                          <---------------AGL15                       --------->AtMYB61                                          --------->TOE2(3)                       <---------MYB46(2)                                         --------->TOE1(3)                      --------->ANAC58                                         <-----------GT1                      --------->ANAC46                                      --------->YAB1                      --------->ANAC58                                      <---------ICU4                     ------>MYB46(1)                                       --------->AHL20(2)                     ------>MYB83                                          --------->ICU4                    --------->ANAC46                                       <---------ATHB51   <------                   --------->MYB46(3)                                      <---------AHL20(2) ------- --->ANAC58       --------->DEAR3(2)                                      <---------AHL20(1)  <------ --->ANAC58      --------->PCF2                                           --------->AHL20(2)  -------   caatatgaagaaaacatggaacccaccaaacaaaaaaaaacatttgttttctcttgataaatgaagaacattgcaaaataattacctcaaagaagaaact  18614900  Previous    Next  AGI:  At5g45840.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to MRH1 (morphogenesis of root hair 1), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G18640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48044.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro dom Range:  from: 18611307    to: 18614448    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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