Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->DEAR3(1)                                            <------------------SPL14                                          ------>NtERF2                 --------->AHL20(2)                                          <---------SPL7                <---------AHL20(1)                                         --------->RAP2.6(2)            --------->AHL20(1)                                      <-----------GT1       ------>MYB46(1)           <---------GLK1(1)      --------->AHL20(2)      <---------MYB46(2) <---------AHL20(1)               --------->AHL20(1)      <---------MYB59 --------->AHL20(1)               <---------AHL20(2)    --------->MYB52(1) --------->AHL20(2)           <---------AHL20(2) --------->SPL7        --------->AHL20(2)       ----- <---------AHL20(2)          --------->YAB1<---------ALFIN1 ------>MYB83<---------AHL20(2)     ------ -------->AHL20(2)           <---------AHL20(1)<---------ZAT14         <---------AHL20(2)<---------AHL20(2) ---------AHL20(2)           <---------AHL20(2)<---------SPL7      <---------AHL20(2) --------->AHL20(2) ---->AHL20(2)               --------->AHL20(2)--------->ZAT14     --------->AHL20(2) <---------AHL20(2)   aaataaattttagaaatcggaaggaagacaataaaattttttgccgcaccgtactgactaccgaaccaaaaaattaaatttagtctatttttttattcct  18608200                                                                                    XXXXXXXXXXXXXXXXX                                                                                 <------ZmHOX2a(2)                                                                                 <---------GLK1(1)                                                                                 --------->GLK1(1)                                                                                <---------AGP1                                                                                --------->ARR11(3)                                                                                --------->ARR14(2)                                                                                ------->TEIL                                                                                <---------ARR14(2)                                                                                <-----------ARR10                                                                                <---------ARR11(3)                                                  <------NtERF2                <---------CCA1(2)                                                --------->DEAR3(1)      ----------->HVH21                                       --------->ARR11(1)        --------->GLK1(2)------>ZmHOX2a(2)                                       <---------ARR14(2)   --------->LBD16  --------->ANAC58     ---                                       <---------GLK1(2)   <---------ANAC58  --------->ANAC55(2)  ---                                       --------->ARR14(2)  <---------ANAC46  --------->ANAC46     ---         --------->MYB52(1)          ----------->ARR10     <---------ANAC58  --------->ANAC55(1)-----   ----------->GT1              ----------->RAV1(2)       <---------LBD16    --------->ANAC58   <---- ->ZmHOX2a(1)                  -------->P<-------TEIL <-----------RAV1(1)   <---------LBD16  -------- --->TOE2(3)------->GAMYB    <---------MYB52(1)--------->ATERF1(1)     <-----------HVH21   ----------   caaaaccgaaataaccgaaaacgtccaaacccttacctgaagattcgtagccgtcgatgttgcggagaaactgagtcacacggatctcagtttgtgaccc  18608300                                                                                      <---------PCF2                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                    <---------DEAR3(1)                                                                                    <---------MYB46(3)                                                                                   --------->ALFIN1                                                                                  ------->MYC2                                                                                  ------->PIF5                                                                                  <-------PIF5                                                                                  <-------MYC4                                                                                  ------->MYC4                                                                                  <-------MYC2                                                                                  <-------MYC3                                            --------->MYB46(3)                   <---------TGA1a                                            <---------MYB55(2)                   --------->TGA1a                                           ------>MYB46(1)                       <---------O2                                           ------>MYB83                          --------->ANAC46                                           --------->ANAC58                      --------->PIF3(3)     --------->YAB1                        --------->ANAC58                      <---------PIF3(3) ---------->DOF2                         ------->GAMYB                           --------->O2 XXX>MIR851-5P                           --------->AtMYB61                     <---------ALFIN1 ------>ANAC58                           <---------ALFIN1                    <----------------PIF3(2) ------>ANAC46                           ==================================================MYC_MYB ------>ANAC58                          --------->MYB46(3)                --------->HSFB2a(1) ------>RAV1(1)                         <---------MYB55(2)                <---------HSFB2a(1) -----ALFIN1          ---------->DOF2--------->MYB46(3)                <------ZmHOX2a(1)<-------TEIL ->PCF2           ---------->DOF2 <---------ETT(2)                 ========================bZIP_DOF ->HVH21      ------->TEIL        --------->ETT(2)                 ---------->DOF2------->MYC3   acacaaagcataaacgagcctaaagaaagaagatggtcgacaaccacccatccaaattagagcgttctctaaaggactgttccacgtgggtgcataatag  18608400                                     <---------ANAC46                                     ----------->GT1                                    ------>NtERF2                                    <------NtERF2                                   --------->LBD16                                   <---------RAP2.3(1)                                  <---------RAP2.3(3)                                      <--------HAHB4                                  <---------RRTF1(2)                                       <---------ICU4                                  <---------RAP2.6(2)                              <---------ANAC58                                  <---------RAP2.3(2)                              <---------ANAC58                                  <---------DEAR3(1)                              <---------HSFC1(2)                                 <---------LBD16                                  --------->HSFC1(2)                            <----------DOF2                                 --------->MYB52(1)                        --------->At4g35610                                --------->TOE1(2)                     <------ZmHOX2a(2)                                  <---------DOF5.7(2)--------->YAB1                    --------->ARR14(2)                                <---------MYB52(1)  <---------YAB1                    <---------ARR11(3)                                --------->DOF5.7(2) --------->ICU4      --------->REM1(1) <---------At4g35610                     <-----------GT1  ------->TEIL  ------     <-------TEIL   --------->ARR11(3)    --------->ICU4  <---------ATHB12 --------->TOE2(2)   <-----   ttcgagctacatcggtgagcaagatcagctctttttgcggcgtaatttttgaaatcaccgatgatttttcccgttaacttacgaagcttgttatcattat  18608500                       <---------At4g35610                  <-------GAMYB                        <---------TOE2(3)                 <---------MYB46(3)               <---------ANAC58            --------->ARR11(3)                    <---------ANAC46                   --------->GLK1(2)            <---------ARR11(3)                    <---------ANAC58                   --------->ARR11(3)        <---------MYB52(1)                       <-------TEIL                       <---------GLK1(2)       <-----------HVH21                  <-----------RAV1(2)                   --------->CCA1(2)    <---------At5g28300--------->At4g35610<---------LBD16                --------->ANAC46 --->ARR11(3) ------>ZmHOX2a(2)        <---------At4g35610             <---------ALFIN1 ----ARR11(3)<------ZmHOX2a(2)         --------->At4g35610            --------->MYB46(3)   cttcatcaccgtgagatcgtcgttgagctaagagttgtttgagctcagggatgcgttgagattgcaaactcatccactcgagataagaatcttgagcttg  18608600                                                                <------------CBF        --------->ANAC55(2)                                                               <---------ICU4           <---------ANAC46                   ------>ZmHOX2a(2)                           --------->ATHB12         <---------ANAC58                  <------ZmHOX2a(2)                        <---------YAB1               <---------ANAC58                 <---------ARR11(3)                    <---------ARR14(2)  ------>ZmHOX2a(2)                 --------->ARR14(2)                ===============================HOX2a_HOX2a                 <---------ARR14(2)                <------ZmHOX2a(1)     --------->ARR11(3)                 --------->ARR11(3)            --------->ICU4 --------->ICU4            <---------ANAC55(1)       <----------DOF2   <---------AHL20(2) <---------AHL20(2)<---------YAB1  <----------DOF2   ttcgatgttctttgatgaagatcccatttttttttttttttctgatataatgaggagtattttgattattggtttgatctcttttggtttgcgtgtttgt  18608700                                                                                     --------->ATHB12                                                                                     <---------ICU4                                                                                     -------->HAHB4                                                                                     --------->YAB1                                                                                    <---------ATHB12                                                                                <---------YAB1                                                                                <---------WOX13(1)                                 <-----------TBP                     <---------AHL20(2)                               <-----------TBP                       --------->AHL20(2)  <---------ARR11(3)                           <---------ANAC46                     --------->AHL20(1)  <---------YAB1 --   <---------ANAC58        ----------->GT1                      <---------AHL20(2)  --------->ICU4 --   <---------ANAC58    <------------CBF      ----------->GT1    <---------AHL20(1) <---------TOE2(3)   <---------ANAC46   --------->ATHB12----------->GT1          --------->AHL20(2) --------->YAB1  --- <---------ANAC46    <---------AHL20(2)    ---------->DOF2     --------->YAB1<---------YAB1--------->ZAT6   gttttgtgtgtttttgttttcatttcattgggtttatatatagttaaaagttaaatggaccagaattatattttattctctgattaatgattatctctaa  18608800                                                                  <---------AHL20(1)                --------->YAB1                                    --------->AHL20(2)           <-----              <---------AHL20(2)                                  <---------AHL20(2)           <-----              --------->AHL20(1)                            ------------>CBF                   <-----              --------->AHL20(2)                         --------->AHL20(2)                    ------   --------->ZAT6                                     --------->ATHB12            <---------AHL20(1)   <-----------GT1                                   <---------YAB1               --------->AHL20(1) --------->YAB1<---------YAB1                        --------->ICU4              --------->AHL20(2) ------->AHL20(2)        ----------->GT1           --------->YAB1 --------->AHL20(1) <---------AHL20(2) ------->AHL20(1)  <---------ICU4                  <---------ICU4--------->AHL20(2) --------->AHL20(1) ------>YAB1 --------->YAB1                       --------->ICU4 <---------AHL20(2) <---------AHL20(1)   aaataatactatacattataatacttatggataaaaatgtcgaataaactgaattatgattaaacaattaaattttcttctaaatatatatttagtagcg  18608900                 --------->YAB1                 -------->ATHB1                 <---------ICU4                --------->AHL20(2)                <---------AHL20(2)                --------->ICU4                <---------ATHB51         ------>MYB83       <---------MYB59       ------->GAMYB    --------->MYB52(1)<---------TOE2(3)  ----------->GT1                <------ZmHOX2a(1)    <-----------GT1<---------YAB1<---------AHL20(2)                    <----------ID1 ----ANAC58   ------>MYB46(1)   <---------AHL20(2)                     ----------->GT1 ----ANAC58   ------>MYB83      --------->AHL20(2)                    ----------->GT1 ----ZAT6------>MYB46(1)        --------->AHL20(1)             --------->YAB1 ----->GT1  <---------MYB59--------->AHL20(2)     --------->YAB1  ---------->DOF2                ----   ttatattaaccgaaccaaattattatcgtttaaatttaatatagggaaacaatgacaaatgtcaaaaataaagaggaaaaatagaaacattgacaactca  18609000                                                                                               <-----                                                                                            <--------                                                                                            ---------                                                                                       <----------DOF2                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                  <---------ANAC58                                                                                  <---------ANAC55(2)                                             <---------AHL20(2)                   --------->ANAC55(2)                               <---------ANAC46                              <---------------AtSPL8           ------->TEIL        <---------ANAC58                 ---------->DOF2   <---------ANAC58 ------>DOF2                   <---------ANAC58           <---------YAB1     <---------------AtSPL3 -   aaagttgaaaatgaacttggacagaaaatgtttacttggacacatattaaaacgagtattagtattgaaagttggaagattagtacgtgctttccgagga  18609100  Previous    Next  AGI:  At5g45830.1    Description:  DOG1 (DELAY OF GERMINATION 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39408.1) Range:  from: 18606709    to: 18608627    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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