Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <----------DOF2                  ------>ZmHOX2a(2)                <---------ARR11(3)                                     <---------ANAC46             <---------WOX13(1)                              <---------YAB1           --------->ATHB12                   ------>ZmHOX2a(1)  <---------YAB1          <---------AHL20(2)           <---------GLK1(2)   <---------AHL20(2)      <---------ATHB51              --------->AHL20(2)     --------->AHL20(2)      <---------AHL20(2)         --------->AHL20(2)       <---------AHL20(2)      --------->AHL20(2)        --------->AHL20(2)        <---------AHL20(1)                        -    --------->YAB1===================================HOX2a_HOX2a <---------AHL20(2)    <---------ATHB12 --------->GT1  --------->ARR11(3)  <---------AHL20(2)    --------->AHL20(2)         --------->WOX13(1)   aatgaaaaataattcattgatcttttctatctaaataaaaaaattctccttcggtttcaaattattttttattgtttgtattagaaacaatcaatttttc  18601800                                                 >>>>>>>>>>WRKY38                                                 >>>>>>>>>>WRKY43                                                 >>>>>>>>>>WRKY6           <---------ANAC46                                                 <---------WRKY18(1)      <---------MYB46(3)                                                 >>>>>>>>>>WRKY26         <------MYB83                                                 >>>>>>>>>>WRKY11         <------MYB46(1)                                                --------->WRKY45         <---------AtMYB61                                                --------->WRKY38(1)      <---------MYB46(3)      <---                         ---------->DOF2        --------->WRKY12<---------AHL20(2)     --------->DAG2     <---------ZAT6     <---------AHL20(2)      ----------->HVH21     <-----------RAV1(1)       ----- -------->YAB1   <-----------GT1              --------->At4g35610     --------->ALFIN1---------->DOF2   taacatagtattagttttttaagcatttaaagcaaaaaaaaaaaaaacagttgaccaataggctatatatatgtgttggtggtatacaaaaagtgagatt  18601900                                                            --------->DAG2                                                           ---------->DOF2                                                       --------->LBD16                                                      <---------HSFB2a(2)                                                      --------->HSFB2a(2)                                                     <---------LBD16                                                <---------------AGL15                    ----------->GT1                                                --------------->AGL15                 <--------------                                                ------>ZmHOX2a(1)   ---------->DOF2   ---------------                                               <-----------------AGL2             <------ZmHOX2a(1)       ------------>CBF               --------->ANAC58--------->HSFC1(1)        --------------------- ------AHL20(2)                       --------->ANAC58<---------HSFC1(1)    --------->ZAT14 ---->AHL20(2)                 <-----------GT1 <-----------------AGL3       <---------ZAT14   tatttgtataccaattctgaaacatttccaaatataccacaagaaaaatcctatttctggaaaaagccctaaaaacagaacagaggaagacgagaaaaac  18602000                                   --------->HSFB2a(2)                                             <-                                   <---------HSFB2a(2)                                       ------>ZmHOX2a(2) ---------->DOF2         ------>ZmHOX2a(2)       <---------ICU4                            --------->ARR11(3) -------WRI1            <------ZmHOX2a(2)        --------->YAB1                            <---------ARR11(3) --------->ANAC81      --------->ARR11(3)       <---------ATHB12 ------->MYC3         <---------ARR14(2) --->ANAC81            <---------ARR11(3)   ------------>CBF     <-------MYC3         --------->ARR14(2)   agagaaagagagagagagagagagagatcgtcttcttctacaacctctcaataatcaaacaaaaaaacgtgttttttttttttttgcgaattcgatcttc  18602100               ------>ZmHOX2a(2)             <---------ARR11(3)         ------>ZmHOX2a(2)        <------ZmHOX2a(2)                                                --------->GLK1(1)       <---------ARR14(3)                                               --------->ARR14(2)       <---------ARR14(2)                                               <---------ARR14(2)       <---------AGP1                                                  <------NtERF2       --------->ARR14(3)                                     ------------>CBF      --------->DAG2       --------->ARR14(2)                                   <----------DOF2     <---------TOE2(3)       --------->ARR11(3)                          <-----------ARR10 <---------ANAC46       <---------ARR11(3)                          <---------ARR14(2)<---------ANAC58            ----     ----------->ARR10              <-----------GT1--------->GLK1(2) <---------ANAC58----------->GT1 -----ZmHOX2a(2)             <----------DOF2      <---------GLK1(2) <---------LBD16---------->DOF2   gatcaagaagatcttgatctcaaaatccaaacttttcttcaccatttcatgagaatctctcgctttcaatggcggatttgttaagaaaagtgaaatcgat  18602200                                                                                     ---------->DOF2                                                                              --------->TOE1(3)                                                                              --------->TOE1(2)                                                                             <---------HSFC1(2)                                                                             <---------HSFB2a(1)                                                                             --------->HSFC1(2)                                                <---------ANAC55(2)          --------->HSFB2a(1)                                                --------->ANAC58           <---------ARR14(2)                      <---------ICU4            --------->ANAC55(2)     --------->ANAC46                      --------->YAB1            --------->ANAC58        --------->ANAC55(1)                     --------->ICU4             --------->ANAC46        --------->ANAC55(2)                     <---------ATHB12        <---------ARR14(2)         <---------ANAC55(2)                   --------->WOX13(1)        --------->ARR14(2)         --------->ANAC58           <-----------HVH21         <---------ANAC58      <------MYB83 --------->ANAC58            -          <------ZmHOX2a(1)          <---------ANAC58      <------MYB46(1) --------->ARR14(2)       -          =================================HOX2a_HOX2a     ----------------------->TaNAC69(2)       - ------>DOF2<------ZmHOX2a(2)       ------>ZmHOX2a(2)    <--------P    <---------LBD16             <-   aaagaagaagcaggatcagagcaatcatcaagctctgatccttggcaaatacgaaatgggtaggcttcttggccacggaaccttcgctaaagtctatctc  18602300                                                                                                   --                                                                                               ------                                                                                             --------                                                                                             <-------                                                                  ----------->GT1            <-------                                                                <---------LBD16              --------                                                       --------->ARR11(3)                    --------                                                       <---------ARR11(3)                    <-------                                                     <---------HSFC1(2)                --------->ANAC58                                                     --------->HSFB2a(1)      <---------ALFIN1 ======                                             ---------->DOF2  --------->ARR14(2)       --------->ANAC58 -------->ANAC58                        <---------WOX13(1)    <---------ARR14(2)--------->ANAC46   <- -------->ANAC46               <------ZmHOX2a(2)     <---------HSFB2a(1)      --------->ANAC58<------ZmHOX2a(2) -------->ANAC58      <---------------------WRI1     --------->HSFC1(2)       --------->ANAC58======= --------TOE1(2)   ---------->DOF2<---------TOE2(3)---------->DOF2--------->LBD16      --------->ANAC46   gcacgaaacgctcaatctggagaaagcgtagcgatcaaggtaattgacaaagagaaagttctcaaatccggtttaatcgcacacatcaaacgcgagatct  18602400          --------->ALFIN1        --------->DEAR3(1)        <---------ANAC58        <---------ANAC46        <---------ANAC58       <------NtERF2      ------>NtERF2      <---------RAP2.3(1) ------>ZmHOX2a(2) ============================HOX2a_HOX2a ------->ARR11(3)                                                        <---------ANAC58 >ZmHOX2a(2)                                                             <---------ANAC58 ->ARR11(3)                                                              <---------ANAC55(2) --ARR14(3)                                                        ------>ZmHOX2a(2) --ARR11(3)                                                      <---------AGP1 ->ARR14(2)                                                      --------->ARR11(3) ->ARR14(3)                                           --------->ANAC58   --------->ANAC55(2) --ARR14(2)                       <---------At4g35610 --------->ANAC58   <---------ANAC46      ------ ============================HOX2a_HOX2a             <------NtERF2<------ZmHOX2a(2)            ------ --------ARR11(3)     ------>ZmHOX2a(1)             ------>NtERF2<---------ARR11(3)      ---------->DOF2 ============================HOX2a_HOX2a           <----------ID1--------->AGP1        <<<<<<<<<MYB98   cgatcttgcgccgtgttcgtcatcctaacatcgttcagctattcgaagtcatggcgacgaaatctaagatctatttcgtaatggaatatgttaaaggagg  18602500                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                     <---------AHL20(1)           <---------MYB52(1)                                                     --------->AHL20(1)       <---------ARR14(2)                                                    <---------AHL20(2)        --------->ARR14(2)                               ---------->DOF2     --------->ICU4             <---------ARR11(1)   <-                          ----------->GT1     ----------->GT1                <---------CCA1(2)  <----                          <------MYB83        --------->ANAC58             --------->RAP2.6(2) ------                   --------->MYB52(1)         --------->ANAC58           <---------At4g35610  <------                   ---------->DOF2            <---------ANAC55(2)        --------->At4g35610  <------                <---------At4g35610           --------->ANAC55(1)    ------>ZmHOX2a(2)        <------ ----->GT1      --------->At4g35610           --------->ANAC55(2)  --------->ARR11(3)         <------ --->At4g35610<--------P  <------MYB46(1)<---------------AtSPL8    <---------ARR11(3) <-----------HVH21   tgaattgttcaacaaggtagctaaaggaaggttaaaagaagaaatggcacgtaaatattttcaacagttgatctcagccgtatcgttttgtcacttccgt  18602600                             <---------HSFB2a(1)                             <---------HSFC1(2)                             --------->HSFB2a(1)                             --------->HSFC1(2)                            <-----------ARR10      --------->YAB1        <---------ARR11(3)     <---------YAB1         --------->ARR11(3) --------ANAC46             <---------ARR14(2) -----MYB52(1)              --------->GLK1(2) --->LBD16                  --------->ARR14(2)                                                    <-- ---ANAC55(1)              <---------GLK1(2)                                                    ----- ---ANAC46             --------->LBD16                --------->TOE1(3)                         <---- ---ANAC58           <---------LBD16     --------->ANAC46---------->DOF2                      ------- ---ANAC58    --------->CCA1(2)   <----------DOF2     --------->TOE2(3)          <---------ZAT18<----   ggtgtttatcatcgagatttgaaaccggagaatcttcttttagacgaaaatggaaacctaaaagtctctgattttggtcttagtgctgtttctgatcaga  18602700  Previous    Next  AGI:  At5g45810.1    Description:  CIPK19 (SNF1-RELATED PROTEIN KINASE 3.5); kinase. similar to CIPK18 (SNF1-RELATED PROTEIN KINASE 3.20), kinase [Arabidopsis thaliana] (TAIR:AT1G29230.1); similar to CIPK12 (SNF1-RELATED PROTEIN KINASE 3.9), kinase [Arabidopsis thaliana] (TAIR:AT4G18700.1); similar to putative serine-threonine kinase [Gossypium hirsutum] (GB:AAT64036.1); similar to CBL-interacting protein kinase 19 [Populus trichocarpa] (GB:ABJ91226.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63583.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Prot Range:  from: 18602169    to: 18603620    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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