Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->ANAC46                                             --------->ANAC55(2)                                             --------->ANAC58                 <---------ANAC58            <---------ANAC55(2)                       <---------ZAT18        --------->ZAT2                       --------->ANAC55(1)                       --------->ZAT14        <---------At4g35610                  --------->ANAC58                   ----------->HVH21        --------->At4g35610           <---------ANAC55(2)      ----------->RAV1(2)     <---------ZAT14       --------->GLK1(2)     ----------->HVH21               --------->ANAC58<---------ARR11(3) --->MYB46(3)    <---------ANAC58 <-----------HVH21    <---------YAB1    ---------->DOF2 ------->TEIL ->ANAC46  <-------TEIL<-----------GT1--------->ANAC55(2)    --------->ANAC58--------->ARR11(3)   actctcaagaagctgcattgccttctcacctctcacagtcacataacacgcaatcttctcattacgcctgataccaaaagacctcacagtgtacctcgct  18583300                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)                                                             ---------->DOF2                          --------->GLK1(2)                ----------->HVH21           --------->HSFB2a(2)                  <-------TEIL   <------ZmHOX2a(2)        --------->LBD16              <---------HSFB2a(2)             ----------->RAV1(1)--------->ARR11(3)       <---------LBD16           --------->TOE1(3)            --------->ANAC46    <---------ARR11(3)  ---------->DOF2                --------->TOE2(3)          --------->AtMYB61 --------->YAB1       --------->TOE2(3)         <-----------GT1    <------   gtataacaaaaaccacaacatacatcagaatcaagatcaacacaaaatcaaacttaaatccctgaaagatttcaaattcacatacccttagagaagacag  18583400            --------->ZAT2            <---------ZAT2            --------->At4g35610            <---------At4g35610          --------->ZAT14                                                             --------->YAB1          <---------ZAT14                                 --------->TOE2(3)   <---------WOX13(1)       --------->At4g35610    --------->ANAC58   <--------ATHB1             <--------ATHB1         <-       <---------At4g35610    --------->ANAC46   <---------ICU4             --------->YAB1        <--     --------->ZAT14          --------->ANAC58   --------->ATHB51           --------->ATHB12      ---     --------->ZAT18  <---------ALFIN1          <---------ATHB12           --------->ICU4       -----     <---------ZAT14----------->RAV1(1)         <---------ATHB51           <---------ATHB12  <------- -----RAV1(2)  --------->At4g35610              --------->ICU4         <---------ATHB12  ---------->DOF2   gggtttgtccactgagctgctccaacacctatacgaaataaccaaaaacaataattcaaatctaaatcactaaatcaatgatggataatcgtaaaggtca  18583500                                                                --------->ICU4                                                          --------->ANAC58                                                          --------->ANAC58                                                         ------>MYB83         --------->YAB1    <------NtERF2                 ------>MYB46(1)   <-----------GT1  --------->TOE1(2)                   --------->MYB52(1) --------RVE1(1)   --------->HSFB2a(1)                 --------->AtMYB61 -------GLK1(2)    --------->HSFC1(2)                  --------->MYB46(3)             --------->TOE2(3) ------>ARR11(3)   <---------HSFC1(2)                 --------->MYB46(3)              --------->TOE1(3) ------>ARR10      <---------HSFB2a(1)        <---------ALFIN1--------->GLK1(1)     ------->TEIL ----HVH21        ------->TEIL            <------ZmHOX2a(2)------->GAMYB      --------->GLK1(2)------   gatttttacaaacaaaatcgaaccttggaggcacgagtgagacgatcaccactctcaccaacggaaatgttgagaacaagtttctgaaccttaatgtccc  18583600                          ------>NtERF2                         --------->ANAC58                         --------->DEAR3(1)                         --------->ANAC58                       ------>NtERF2                       <---------ATERF1(1)            <---------At4g35610           <---------ARR11(3)        <---------HSFB2a(2)        --------->HSFB2a(2)----------->RAV1(2)          <-----------GT1   <---------ANAC58   --------->ANAC46         ----------->GT1   <---------ANAC58   --------->DEAR3(1)       --------->RAP2.6(2)              --------->ATHB12 ----------->AGL1     ----------->HVH21   ---------->DOF2                      <---------YAB1    *TSS   tcatggggttcgagagcttcttctccgacgcctgagaaacaaaacaaagccgaaaaataaacccattgaactaaacacattttcattgaatcgatctaca  18583700                              <------ZmHOX2a(2)                              ------------>CBF                             <---------ARR11(3)                             --------->ARR11(3)                            --------->GLK1(1)                          <------ZmHOX2a(1)                                                  --------                 --------------->AGL15                    <---------ZAT14                  --------->ZAT18                 <---------------AGL15                    --------->ZAT14                  <---------ZAT14                ----------------->AGL3                    --------->REM1(2)             <---------ANAC46     --------->ANAC58   <---------TOE1(3)                --------->ALFIN1          <---------ANAC46     --------->ANAC58   <---------TOE2(3)      --------->CCA1(2)     ---------->DOF2<-----------HVH21   --------->MYB52(1)<---------AHL20(2)       <----------ID1  <---------ZAT6  --------->ARR14(2)   gagacgaacgaaacaaataccattttaaggagatcaatgtcgagctaagagacgaagcagtgtagagtttgcaaagcccaaaactgcgtcgagtgcaaag  18583800                                              --------->ICU4                                              <---------ATHB12                  <---------MYB52(1)          ----------->TGA1                 <------MYB46(1)          XXXXXXXXXXXXXXXXXXXX>MIR418                 <------MYB83            --------->ANAC58                 <---------DEAR3(2)      --------->ANAC46               --------->AHL20(2)                --------->MYB111(1)      --------->ANAC58               <---------AHL20(2)                <---------MYB46(3)      <---------TOE2(3)          --------->AHL20(2)                --------->MYB59<---------ANAC58                    <---------AHL20(2)             ---                --------->MYB46(2)     --------->MYB52(1)         <---------WOX13(1)           ------   --------->ARR11(3)          <---------ANAC46              <----------DOF2 ----------->GT1  <------   <---------ARR11(3)          <---------ANAC58         <-----------GT1--------->YAB1        -------- -->DOF2        <---------DEAR3(1)     <-----------GT1 <-----------GT1<---------YAB1       --------->ICU4   tgagagaacttatatgggtcggtacttagggtttcttgaattaacgcaatgacgaaattacccctttgatttattaaaatggtttaatgggccaatatta  18583900                     --------->TOE1(3)                 ----------->GT1                     --------->YAB1                   --------->DAG2                       <---------ANAC55(2) ------->DOF2        --------->TOE2(3)            --------->ANAC55(2)                      <---------YAB1 --->YAB1          <---------ARR11(3)             <---------ANAC55(2)               <----------DOF2 ---YAB1       --------->YAB1        ---------->ID1  ---------->DOF2        --------->DEAR3(1) ->AHL20(2)---------->DOF2     <---------AHL20(2)<-------TEIL     <----------DOF2   <---------DAG2   taaagcccataagaaaagcataatcttaagcatatatttggccttcttagttacataaggcaaatagtctttcattcgccgaatcactttattatgtatg  18584000                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                       --------->AHL20(2)                                               <---------ARR11(3)                                               --------->ARR14(2)                                               <---------ARR11(1)                                               <---------ARR14(2)                                               <-----------ARR10                                               --------->ARR11(3)                      <---------AHL20(2)      --------->GLK1(1)                      --------->AHL20(2)      <---------CCA1(2)          <---------TOE1(3)               --------->ANAC58          <---------TOE2(3)               --------->ANAC46         --------->MYB52(1)               --------->ANAC58    <---------HSFB2a(2)         <-----------GT1               --------->ARR14(2)     --------->HSFB2a(2)     --------->ATHB12         <---------DOF5.7(2)           <---------ARR14(2) <---------YAB1   --------->AHL20(2)   agttttaaaattaacgatagataattttttatgagactgtggaaacgcaaatcttcatttatttttggaagaacagaataaataagagttattgagaaaa  18584100                                                                                <---------HSFB2a(2)        <---------ZAT6      <----------ID1                                    --------->PCF5      <---------At5g28300 --------->YAB1                              --------->YAB1     <-----------GT1--------->YAB1                                   <---------YAB1   --------->At4g35610  <---------ICU4   ----------->HVH21                               --------->WOX13(1) <---------At4g35610   caaatttttacagttaatgccatgacaatgacaacaaaatcaagaagactagttaagacactatgaagtctatcatcgtggtccagagagctcaatggct  18584200  Previous    Next  AGI:  At5g45775.1    Description:  60S ribosomal protein L11 (RPL11D). Identical to 60S ribosomal protein L11-2 (RPL11D) [Arabidopsis Thaliana] (GB:P42794;GB:P42796;GB:Q42195;GB:Q8LD47;GB:Q9LXT1); similar to 60S ribosomal protein L11 (RPL11B) [Arabidopsis thaliana] (TAIR:AT3G58700.1); similar to RPL16A (ribosomal protein large subunit 16A), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT2G42740.1); similar to RPL16B (ribosomal protein L16B), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT4G18730.1); similar to 60S ribosomal protein L11 [Hyacinthus orientalis] (GB:AAT08727.1); contains InterPro domain Beta tubulin, autoregulation binding s Range:  from: 18582292    to: 18583697    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g45780.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to NIK3 (NSP-INTERACTING KINASE 3), kinase [Arabidopsis thaliana] (TAIR:AT1G60800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48035.1); similar to putative leucine-rich repeat transmembrane protein; putative protein kinase [Gossypium hirsutum] (GB:AAT64032.1); similar to putative leucine-rich repeat transmembrane protein; putative protein kinase [Gossypium hirsutum] (GB:AAT64017.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Pro Range:  from: 18584039    to: 18586852    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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