Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <------MYB46(1)                                                                                  <------MYB83                                                                               <-------GAMYB                                                                               <---------ANAC58                                                                              --------->MYB55(2)                                                                              <---------MYB46(3)                                                                          <---------DEAR3(2)                                                                          <------MYB46(1)                                                                          --------->ATHB12                                                                          <------MYB83                                                                          --------->MYB55(2)                                                                          <---------MYB46(3)                                                                          --------->MYB52(2)                                                                      <---------MYB46(3)                                                                      --------->ATHB12                                                                  <-------TEIL--------->MYB52(2)                                                               <------MYB46(1)<------MYB46(1)                                                               <------MYB83<---------ANAC58                                                               <---------MYB46(3)<---------AtMYB61                                                              --------->ALFIN1<------MYB83                                                              <---------AtMYB61<---------ANAC58                                                              <---------DEAR3(1)<--------P                                                            <---------ANAC58  <---------DEAR3(2)                                                            <------MYB46(1)<---------ANAC58  --------                                                            <---------ANAC58  --------->ATHB12                                                            <---------ANAC46 <---------MYB46(3)                                                            <------MYB83 --------->MYB111(1) <-------                                                           <---------MYB46(3)<---------AtMYB61-------                                                           --------->MYB55(2)--------->MYB111(1)                 --------->TOE1(2)                        <---------MYB55(1)<--------P   <---------AHL20(2)                --------->MYB46(3)                       <---------MYB52(1)<-------GAMYB--------->AHL20(2)           --------->ALFIN1             --------->YAB1  <-------GAMYB<---------YAB1     <---------AHL20(2)        --------->DAG2                ------>MYB83     <---------ANAC58  <---------AtMYB61   <-------       ---------->DOF2                ------>MYB46(1)  <---------ANAC46  <---------MYB46(3)  --------   ---------->DOF2---------->DOF2 >>>>>>>>>>MYB80      <---------ANAC58 <--------P<---------MYB46(3)   aaaacaaaagaaagtggaaccaaagaaggaagttcaaaccaaacatattcagaaatgtcgttgggtggttcatggttggttggttggtttttaaatttat  18547700         <---------AHL20(2)                                        <---------AHL20(2)     <---------AHL20(2)                                            --------->AHL20(2)    --------->AHL20(2)                                        <---------ARR11(3)    <---------AHL20(2)                                      <---------YAB1   --------->YAB1        <---------------AGL15              --------->ICU4                 --------->TOE2(3) ->AHL20(1)              --------------->AGL15        --------->ZAT14                     <---------ZAT6 --AHL20(2)             <---------ANAC55(2)           <---------ZAT14                ----------->GT1 -->ATHB12    ------->GAMYB                           --------->ZAT18              ------->MYC3 --AHL20(1) <---------At4g35610      --------->DAG2   <---------ZAT18   --------->YAB1    ----------- ->AHL20(2)<-----------GT1         ---------->DOF2  <---------------AtSPL8         <-------MYC3   tgcaattttaatttaactgactaaatacttaaaaatgaaaaggtagaagaaaatagtgtaccatgatttttaaatgatagtagcatatggtaatgttaaa  18547800                      ---------->DOF2       <----------DOF2                  <---------ANAC58      <---------TOE2(3)        <-----------GT1                  <---------ANAC58 --------->ATHB51      <-------TEIL      <---------DAG2                  <---------ANAC46 --------->AHL20(2)--------->DAG2        <----------DOF2 >GT1   <---------WOX13(1)        --------->ICU4    ---------->DOF2  --------->ZAT14   aatcgatctaattgaaaatgccttgaaagttgaggcattatttaggctttagagaaaagttcatgaattactactctctttttgaatcatctaagagggt  18547900                                             --------->YAB1                                             <---------ICU4                                            --------->ICU4                 ----------->GT1            <---------ATHB12                                      ---              ---------->DOF2             --------->YAB1                                        <----            <---------YAB1     ----------->RAV1(1)        --------->YAB1                      -------       <---------At4g35610    --------->ANAC46   ---------->DOF2                     ----------->GT1   <----------DOF2            --------->REM1(1)<---------YAB1                <----------DOF2 <-------   ttagactttagatgataaaagctaaaaattctacaacacattactaatcatcaaagctattcatattgggcctgtaaggctttaatcttgaaaatatgat  18548000                                         --------->ANAC58                                      --------->ZAT2                               <---------ANAC58                               <---------ANAC58  <---------YAB1                           <----------DOF2     <---------At4g35610                          <---------ANAC58  <------------CBF                                    <----                       <--------P     <------NtERF2                                             <----                      <-------GAMYB   <---------ZAT2<---------WOX13(1)                       <-------                  <---------ANAC58   ------>NtERF2 <------------CBF                        --------->KAN4(1)                  <---------ANAC46   --------->ANAC46                        --------->ARR11(3) -----    ---------->DOF2  <---------MYB46(3)  --------->ANAC58                    <-----------GT1---------   <---------REM1(1)<---------AtMYB61--------->ANAC58                   <---------YAB1     <---------KAN4(1) ------->DOF2     <-----------RAV1(1)--------->ANAC58                   <---------AHL20(2)<---------KAN4(2) -----YAB1        <---------ANAC58  --------->ATERF1(2)             <----------DOF2    <---------TOE2(3) -->YAB1        <---------ANAC46    <---------ATERF1(2)        ---------->DOF2     <----------DOF2 --YAB1  ------------>CBF <---------ANAC58--------->ICU4  ----------->RAV1(1)<---------ARR11(3)<-----   aaaagatgaagcccaattttgtgtggttgctttgtttgccagcaaggattgctgattgtccaacacaaagcttttttattatcttctttgagattattct  18548100                                                                                            --------- <---------LBD16                                                                   <---------ANAC58 -----------AGL15                                                                  <---------ANAC46 ------DOF2                                                                     <---------GLK1(1) --YAB1*TSS   <---------ARR11(3)                                                --------->GLK1(1) ---------->AGL15    --------->At4g35610                                       <---------ARR14(2) >KAN4(2)     --------->ARR11(3)      <-------GAMYB               ---------->DOF2  <---------ANAC58 ------------AGL3    <---------At4g35610               ------>ZmHOX2a(1)       --------->ARR14(2)   ttatctggatagagaagataatgagctccttggggttttcagttggaacttgttctcctccaagtgagaaaagaaaatgcagatttcttgtgaataatag  18548200                                                                                    --------->ALFIN1                                                                               ------>ZmHOX2a(1)                                              ----------->RAV1(2)             <---------------AGL15                                              <---------At4g35610            ----------------->AG                                --------->ANAC46             <---------TOE2(3)--------------->AGL15                                --------->ANAC58      ------>ZmHOX2a(1)    <-----------GT1         --                                --------->ANAC58      --------->LBD16     --------->YAB1        -----    ---------->DOF2<---------AHL20(2) --------->DAG2==================================HOX2a_HOX2a --- >YAB1             <-----------GT1   ---------->DOF2------>ZmHOX2a(2)    <---------ATHB12       -----   cttaaacaaagcagaggctattaacttgagaaacaagcaaaaagtttcttctgatcctgagttaagttttgcccaattatcctcatgtggtagaagagaa  18548300           <---------AtMYB61  --------->ATHB12  <--------ATHB1  <---------ICU4  -------->ATHB1  --------->ATHB51 <---------ATHB51                    <---------TOE2(3) <---------ATHB12              <---------WOX13(1) <---------YAB1               <---------ANAC58                                                    <-- --------->ICU4               <---------ANAC46                                                    <-- ------->WOX13(1)             <---------ANAC58                                        ------>ZmHOX2a(1) ---->ANAC58              <---------ANAC46           --------->ANAC46  --------->ARR14(2)        <--- --------->ATHB5          <---------ANAC58           --------->RAP2.6(2)          <-----------------AGL1 ---->ANAC58              <---------ANAC58         --------->At4g35610 <---------ARR14(2)        <---   gcaattattggttttggtttctctattggcttgcttgataatgtttctgcattagccgaaacaacttcttgtgaattctctgtgtctccttctggtcttg  18548400                 <------MYB83         --------->DAG2        ---------->DOF2     ------>ZmHOX2a(1)                                   <---------ARR11(3)     xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                     --------->ARR11(3)    <---------YAB1<-------GAMYB                                                --------->CCA1(1) --------DOF2    <---------MYB46(3)                                            --------->RVE1(1) -------DAG2     <------MYB46(1)               <---------MYB52(2)            --------->AHL20(2) ------ANAC58--------->MYB111(2)      ---------->DOF2       --------->ICU4   --------->YAB1       <-- ------ANAC58<---------MYB46(3) <---------At4g35610<---------ATHB12         <---------ATHB12      <--   ctttttgtgataaagttgttggttatggtcctgaagctgttaaagggcaactaatcaaggtgatttttaagtatatcaataatatctcaaattacaatga  18548500           <----------DOF2        <---------ARR11(3)<---------YAB1           <-------TEIL  <-----------GT1   --------->ATHB12            --------->ANAC58                        --------->YAB1 -------DAG2      ------->TEIL          <---------YAB1                               <----------DOF2 --------DOF2  <---------YAB1<---------YAB1     --------->ANAC58               ---------->DOF2     <-   ctttttgcaatttctttatgaatgtttgatgattcttgaatgtttattgcaggcacattatgtagggaagttggagaatgggaaagtctttgatagtagc  18548600  Previous    Next  AGI:  At5g45670.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G18970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70243.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 18545721    to: 18547677    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g45680.1    Description:  FK506-binding protein 1 (FKBP13). Identical to FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplast precursor (FKBP13) [Arabidopsis Thaliana] (GB:Q9SCY2;GB:Q8M8T4); similar to immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative [Arabidopsis thaliana] (TAIR:AT4G39710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41908.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 18548107    to: 18549564    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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