Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <----------DOF2                                                                             <---------ANAC58              --------->AHL20(2)                                             --------->ANAC46           --------->AHL20(2)                                                <---------ANAC58        --------->TOE1(3)                 ------>MYB83                    --------->TOE2(2)        --------->TOE2(3)     ------->TEIL------>MYB46(1)                 --------->TOE1(2)        --------->YAB1      <---------ZAT14                  <----------DOF2 <---------ANAC55(2)      -------->P            --------->ZAT14    --------->ZAT6<---------DAG2 <-------TEIL    --------->MYB46(3)    --------------->AtSPL3       --------------->AtSPL3<---------ANAC55(1)  --------->ANAC46        --------------->AtSPL8       --------------->AtSPL8--------->ANAC55(2)   ttacaaacaaccataaatttatacatgaactgtacttccaaaccaaataacacaaatacagtactttatttctgaacatacgtgatactttcacaaatac  18438600                                                                                      --------->At4g35610                                                                                      <---------At4g35610                                                                                  <-------GAMYB<-----                                                                                 --------->MYB55(2)                                                                                 <---------MYB46(3)                                                                                 --------->MYB111(2)                                                                                <---------MYB55(1)                                                                                <--------P   <-------                                                                               <-------GAMYB ------>NtERF2                                                                           --------->ALFIN1  <-------                                                                         ==============MYC_MYB ------                          <-------GAMYB                                  <---------ANAC58   ---------                         ----------->GT1                                 ==============MYC_MYB<------NtERF2                      <---------MYB52(1)                                 ================MYC_MYB                      <-----------HVH21               --------->CCA1(2)  <---------ANAC46   <--------                 <-----------HVH21            ---------->DOF2            --------->TGA1a    <--------                 <---------SPL7          <----------DOF2   --------->At4g35610<---------MYB46(3)-----                -------------->OsCBT     ==========================================bZIP_DOF <--------            <---------At5g28300    --------->ALFIN1  <---------ARR14(2)  <---------TGA1a    ---------          ----------->HVH21<---------MYB52(1) =====================================bZIP_DOF ---------   ----------->GT1 --------->SPL7  <---------MYB52(1)--------->ARR14(2)  <---------ANAC58  --------->RAP2.6(3)   tacttaagttaaatgaccgcgtccggtccgttaaaacgttgggctttgtaaagcagatatgagcttcgatttgtaacgtgcggttgttagcaggccggcc  18438700        ----------->GT1 ------------AGL1 --DEAR3(2) --ATERF1(1) ----------->AGL1                                     ---------->DOF2 >DEAR3(1)                                       --------->AHL20(2)                             <---- -DEAR3(1)                                      --------->AHL20(2)                ------>MYB46(1) -ATERF1(2)                                 >>>>>>>>>>GT-3b                       ------>MYB83 >>>>>> ------->CBF                             --------->ANAC58        <---------AHL20(2)            >>>>>> -RAP2.6(2)          <---------ANAC46    --------->ANAC58        --------->AHL20(2)            >>>>>> >RAP2.6(2)    --------->DAG2       --------->At4g35610 <----------ID1   --------->At4g35610   >>>>>> >ATERF1(2)   ---------->DOF2       <---------At4g35610 ----------->GT1  <---------At4g35610   <-----   caattcggaccagaaaaaaagcgtcgtttaagtagaacagctcaagaaaaataaaaaaaagaaaaatttatatgcagcgaaacccacttaaaatgtggat  18438800                                      ------->GAMYB                                    ------>MYB46(1) <------------CBF                   ------>MYB83 -----WOX13(1)                      -------->P >>>GATA-3                    --------->KAN4(2)                      --------->ANAC55(2) >>>GATA-4                   <---------KAN4(1)                   <----------DOF2                   <- >>>GATA-2                   --------->HSFB2a(1)              <---------ARR11(3)                <---- >>>GATA-1                   <---------MYB46(3)        <------------CBF        <---------TOE2(3)----- -------CBF                <------------CBF --------->GLK1(2) --------->ARR11(3)       <---------GLK1(1)   tgaaattgaaatcgaatcgaagggagagcgattgttccaaccctagaatcagtctgaaattgaagctctttaagtatcgatgaggtttgatttcagtgga  18438900         <---------AtMYB61         xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->ALFIN1     <---------ANAC58     <---------ANAC58     <---------ANAC46 <------------CBF                            --------->YAB1 >>>>>>>>>ARR2                            --------->WOX13(1) --------YAB1                           ------------>CBF              <---------RAP2.6(2)         <-- -----ARR14(2)                          <------ZmHOX2a(2)            <---------LBD16      <---------TOE2(3) ---->ARR14(2)                        <------ZmHOX2a(1)------------>CBF            --------->YAB1<---   tttgattgtgtgtggtttcttcattcttcagtcgtatcgaggatcaattagagtgatttcaatttagtctatgcggcttcttctctcatatttaggctat  18439000                                                          <---------ANAC58                                                       --------->GLK1(1)                                                       <---------GLK1(1)                                                      --------->ARR11(3)                                                      <---------ARR11(3)                                              <------NtERF2                                              ------>NtERF2                                             ------>NtERF2<---------ANAC58                                             --------->RAP2.6(2)                                            <---------ANAC58              <---------ANAC58                                            --------->ATERF1(2)           <---------ANAC58                                            <---------DEAR3(1)         <---------GLK1(1)                                            <---------ANAC58           --------->GLK1(1)                         --------->ZAT18    <---------ANAC46          <---------ARR14(2)                         <---------ZAT18    <---------RAP2.6(2)       --------->ARR14(2) -------RAP2.6(2)     <---------ANAC46      <---------ATERF1(2)     <---------TOE2(2) ------LBD16     --------->YAB1            --------->RAP2.6(3)      <---------TOE1(2)  --------->YAB1   gcggcttcttctctcacagtcatcgtgtgtgctattggtttcaatggcggccaaaagatttcttccctcgcagatttcttgagttttgatcagaattcac  18439100                                                                                       ------>ZmHOX2a(2)                                                                                     <---------ARR11(3)                               --------->ZAT18                                       --------->ARR11(3)                        <---------TOE2(3)                                           --------->YAB1                  <-------TEIL <---------ZAT14                                   --------->YAB1              <---------TOE1(3)<---------ZAT18<---------TOE2(2)             --------->At4g35610              <---------TOE2(3)--------->ZAT14<---------TOE1(2)    <---------LBD16<---------KAN4(2)              <---------------AtSPL8    <----------DOF2    ----------->GT1  --------->ZAT2   atttacttcattgtttaaggtacattgagatagttcacttgtctttcgcaggtttttggaattgtgtaatctggaatcagctagaatgatcttcaaggca  18439200                                            ----------->GT1                                    <------ZmHOX2a(1)          --------->DAG2            <---------YAB1         <----------ID1             ---------->DOF2        <-----------HVH21          ----------->GT1    --------->YAB1               <----------DOF2       --------->ANAC46         ---------->DOF2     <-----------GT1        <-----------HVH21 --------   atctcatacatgtcatgactcttgttggaatataaaaaggataaatgggataattttcatcacaaaaagcttacaaatgtcacatctttatgcagaaaag  18439300                                                               <---------LBD16                        ----------->GT1                        --------->LBD16                     --                      ---------->DOF2                         <---------ANAC46                    <--                  --------->At4g35610                        <---------LBD16                  <------   <-------TEIL<---------At4g35610                  ------->TEIL                              <------ -->DOF2       --------->At4g35610      ---------->DOF2 <---------TOE2(3)        ------>ZmHOX2a(1)<--   aagagttcattgttttgagcagaagaaagtagaaagaaatacaaaagcagaacgaatttagattacggggaatgttgttcttcctcactctcacttgcct  18439400                                 <---------HSFB2a(2)                                 --------->HSFB2a(2)                                ------>ZmHOX2a(2)                           --------->ANAC58                              <---------AGP1                                --------->ANAC46   ------ ------->YAB1                 --------->ARR11(3)                     --------->ANAC58          ------ -------YAB1           ==========================================bZIP_DOF   --------->ANAC58  ------- ---ANAC58             <----------DOF2                 --------->TGA1a  ----------->RAV1(1)   ------- ---ANAC58        <---------At4g35610         <---------MYB52(1)     --------->ANAC46   <---------At4g35610 -------ATHB12    --------->GLK1(1)        ------>ZmHOX2a(2)         --------->ANAC58   --------->At4g35610   atgatgagtttggctctggcatctcctttgttgatctggaactgatctgttagtccgaagtgagccattagaagccacacgaagtttatgagctctccgc  18439500  Previous    Next  AGI:  At5g45469.1    Description:  unknown protein Range:  from: 18438971    to: 18439189    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g45470.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45530.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45540.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39193.1); contains InterPro domain Protein of unknown function DUF594 (InterPro:IPR007658) Range:  from: 18439212    to: 18442269    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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