Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->CCA1(2)        <---------ANAC58                               <---------ARR14(2)        <---------ANAC58                               --------->ARR14(2)    <----------DOF2                                   <---------RAP2.6(3)  <---------ZAT18 <-----------GT1         --------->DAG2         ---------->DOF2            --------->ZAT18 ------DOF2             ---------->DOF2<---------AHL20(2)                --------->At4g35610     ---- -----DAG2  ---------->ID1             --------->AHL20(2)      <----------DOF2      <---------MYB59   ttttgactttacttgtccctcaaaaaaaaagttttgggtttttaaatgtcaaaagccgatatgggctttaaaaacagcccactatgcctaatattgtgat  18405100                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                 <---                                                                                                 <xxx                                                                                              -------                                                                                              ------>MYB46(1)                                                                                              ------>MYB83                                                                       ----------->GT1      <--------             --------->MYB52(1)                                     ------>MYB83           --------->DEAR3(2)         <------MYB83                                               --------->MYB52(1)   --------->MYB52(1)         <------MYB46(1)                                            ------>MYB46(1)      ------>MYB46(1)        <---------TOE2(3)                                      <-----------GT1           ------>MYB83        --------->MYB59             <---------AHL20(2)         --------->MYB52(1)      <---------MYB59    --------->ATHB12            ----------->GT1            ------>ZmHOX2a(1) --------->MYB52(1) ----- <-----------------AG    --------->AHL20(2)         <---------YAB1<---------MYB59      <---------MYB52(2) -->ZmHOX2a(2)      --------->AHL20(2)            --------->YAB1  ------->GAMYB        <---------MYB46(2)   ctaaactgattaggttaaccgattaaaaaaaattcggtttaatttcggcgaattataaatcctagtaaccgaaccgaaaaaaccgagtaccgaaccgaac  18405200  <---------MYB59 ---->MYB46(1)                                                         ------>MYB83 ------->MYB52(1)         <---------At4g35610                   --------->MYB46(3) ---->MYB83            --------->RAP2.6(3)           --------->LBD16   ------>MYB46(1) ------MYB59   <---------DEAR3(2)                   --------->ANAC46   --------->MYB52(1) xxxxxxxxxxxxxsmallRNA(s) --------->At4g35610       --------->LBD16  <---------MYB59    <---------ZAT14 -->MYB52(1)   <------MYB83                   ---------->DOF2 ------>MYB46(1)  <-----------GT1 -MYB59        <------MYB46(1)             ----------->GT1    ------>MYB83----------->GT1         --- ---->DEAR3(2)--------->MYB59 <---------GLK1(2)    <---------LBD16--------->MYB52(1)--------->LBD16   cgaaccgaatttttgttcggttcaattcggcagaatttttgaaaaccgaaaaacccggaaaaccgaacaaaccgaaccgtttaacccgagtaaaccgaat  18405300       <-----------GT1        --------->YAB1      --------->CCA1(2)     <-----------GT1----------->GT1             --------->CCA1(2)      ----------->GT1 ------>AHL20(2)  <---------LBD16             <------ZmHOX2a(1)<-----------GT1   <---------MYB52(1)   ttttatattacaccattttttgtggaaaattttcatattttttaagtaggatatatgagcatatttaacaaatgtgttaatctgttaggcttcaatgtgt  18405400                                                                                      ------------>CBF                   ----------->GT1                                                    <---------ZAT14               --------->GLK1(2)                                                 --------->MYB46(3)         --------->AHL20(2)         --------->TOE2(3)                           ------>MYB46(1)       <---------TOE2(3)   <---------AHL20(2)                                   ------>MYB83   --------->CCA1(2)      <---------AHL20(2)                                   --------->MYB52(1)  --------->ARR11(3)      --------->AHL20(2)          --------->YAB1          --------->AtMYB61  <---------ARR11(3)<XXXXXXXXXXXXXXXXXXXXMIR399F     <---------YAB1           --------->TOE1(2)   ataagatttaagaaaataatctggcaaatttttttttgcctcaacttaacaaaaaatcatagttaacaaattgaagaagaccaacgactacaatgaccag  18405500                                                                            <---------ARR11(3)                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)                                                                     --------->GLK1(1)                                                                    <---------ARR14(2)                                                                    --------->ARR11(3)                    --------->ANAC58                                <---------ARR11(3)                    ----------->GT1                                 <---------AGP1                    --------->ANAC58              <-----------GT1   --------->ARR14(2)      ---------                  *TSS    --------->MYB52(1) <---------YAB1        <------ZmHOX2a(1)    <-----------RAV1(2)               --------->HSFB2a(2)         <-----------GT1     ---------->DOF2       <---------WRKY38(1)               <---------HSFB2a(2)         --------->YAB1    <---------ATHB12  <----------DOF2   agaagttttttttttttttggaacgaaaaaacagagaagttagaattacaatttacagagcaaatcaaaggatctcaatttctttagtcaacaggtgttc  18405600                                                               <---------DEAR3(1)                                                              --------->ATERF1(1)                                                             <---------ATERF1(1)                                                             <---------RAP2.3(1)                                                    --------->TOE2(3)                                                  <------ZmHOX2a(2)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                                --------->GLK1(1)   ----------->HVH21                                             ------>NtERF2   <---------ORA47(2)                                             --------->LBD16 <---------DEAR4(2)                                            <---------DEAR3(1)<------NtERF2                                         --------->ARR14(2)  ------>NtERF2                                         <---------ARR14(2)  <---------ERF1                                        --------->ATERF1(1) <---------DEAR3(1)                                        --------->ZAT2      <---------RAP2.3(3)                                        <---------ZAT2      --------->DEAR3(1)                                        <---------At4g35610 <---------RRTF1(3)                                        --------->At4g35610 <---------ANAC46                                        <------NtERF2------>ZmHOX2a(1) <---------ANAC46             <                   <---------TOE2(2)   <<<<<<<<<AtERF-3  --------->ANAC46                           -             --------->ARR14(2)        <---------ATERF1(1)  <---------RAP2.3(2)              <-------             <---------ARR14(2)        <<<<<<<<<AtERF-4--------->MYB52(1)            --------->ANAC58 >ALFIN1  ------>ZmHOX2a(1) ----------->GT1<---------LBD16 <---------ABI4(1)         --------->ANAC58   cttctcttcttcctcgattcggaggtagagaagaaaaatggcagctccggcgatcctaaacggcggcgatgcgacggagagagaaacacgaatggctcac  18405700                                              <---------ANAC55(2)                                              --------->ANAC55(2)            --------->ZAT2                                              <---------YAB1                 <---------At4g35610                                              --------->ANAC58               <---------ZAT2                                           <---------ARR14(2)                --------->At4g35610                                --------->ARR14(2)                      --------->WOX13(1)                                <---------ARR14(2)                  <---------ANAC46                               <------ZmHOX2a(1)---------->DOF2     ----------->GT1                 <     --------->YAB1   --------->ICU4      <-------GAMYB           <------MYB83                      -    ----------->HVH21 <---------YAB1     <---------MYB46(3)       <------MYB46(1)                   < ---------ZAT14  <---------At4g35610   ------->MYC3          <---------TOE1(3)                      - -------->ZAT14<-----------RAV1(2)     <-------MYC3          <---------TOE2(3)                   ---- --ZAT18   <---------MYB46(3)<---------ANAC46 --------->ANAC58   <---------AtMYB61           <-------   tctgcaatgacattggttcaggtcataaatggaggataccatgtggttacgaaagtagctcttaacgttggtgtaaatcagctcgttttttgtgtctttc  18405800                                             ---------->DOF2                                           ----------->HVH21                                          --------->LBD16  ------>ZmHOX2a(2)                      <---------ANAC55(1)                                      <-- <------ZmHOX2a(2)                       <---------ANAC46                                         <-- ---------ARR11(3)                       <---------ANAC58                             <----------DOF2 -------->ARR14(2)                       <---------ANAC58  <-----------GT1--------->RVE1(1)       <-- ---------ARR14(2)                <---------DAG2      <---------DAG2     <---------ARR11(3)       <-- -------->ARR11(3)                <----------DOF2     <----------DOF2    --------->ARR11(3)  ------>ZmHOX2a(1) ----->HSFB2a(2)         ------->TEIL   <---------LBD16   <-----------GT1--------->GLK1(2)   <------- ---DOF2                <---------ALFIN1<-----------------AGL1          <---------GLK1(2) ---------->ID1   gcgatcttcttgctctctccattctcgcacctctcgcttttttccgtgaaaggtccctttttatcttcttctcaaaatctctctgtttctttatcctttt  18405900                                                          <------NtERF2 -------ANAC58                                           --------->LBD16               <---------HSFB2a(2) -------ANAC46                                           ----------->GT1               --------->HSFB2a(2) -------ANAC58                                          <---------RAP2.6(2)           <---------LBD16 -------AtLEC2    --------->ZAT14  <---------WOX13(1)   --------->ANAC46          ------>ZmHOX2a(2) ---DOF2 ---------->DOF2        <---------YAB1         <---------LBD16          --------->ARR11(3)   gcttgaattgctaaagtctctgaagtctctgtttctgattgttttgatgagtttatatgcggcaaaatcagacaaatagtttgatctctctggaattgga  18406000  Previous    Next  AGI:  At5g45370.1    Description:  nodulin-related / integral membrane family protein. similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT4G19185.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63731.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 18405518    to: 18407647    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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