Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <-----------HVH21                                       <---------AHL20(2)                         ---------->DOF2     <-----------GT1  <----------DOF2       --------->AtMYB61--------->GLK1(2) ----MYB52(1)   ------>MYB46(1)     --------->AHL20(2)     <---------WRKY12 --ANAC58       ------>MYB83       --------->AHL20(2)      <---------WRKY38(1)                ------- --ANAC58------>ZmHOX2a(1)         <---------ATHB12      <------ZmHOX2a(1)       --------->YAB1   tcttctttatcctctacctacaaaaaccaaagcatcaataaataatctaacctttcacaggacaacgctgaacaagagcaaaatcacaatggacatcaat  18403600                                                                         --------->ANAC46                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                      <------ZmHOX2a(2)                                                                     --------->AGP1                                                                     --------->ARR11(3)                                                                <-----------GT1                   <---------ANAC55(2)                  <---------ARR11(3)                    -------                   --------->ANAC55(2)                  --------->ARR11(3)              --------->YAB1 -->WOX13(1)  --------->YAB1                 ------->TEIL<------ZmHOX2a(2)             <---------YAB1   cgaagaacatgaacaaaaattatgtgatttttcaaaaatttcaaatgtatgcatataagatcaaatttacagatcaaggaactgaagttatcaaaaatga  18403700                          --------->ETT(2)                          <---------ETT(2)                      --------->GLK1(2)      --------->At4g35610                      <-----------ARR10      <---------At4g35610                      <---------ARR11(3)  <-------TEIL                      --------->ARR11(3)<---------ARR14(2)                 ----------->GT1        --------->ARR14(2)      --------->ATHB12      --------->TOE2(3)                ----------->GT1         <---------GLK1(2)     <---------WOX13(1)      --------->TOE1(3) ---->GT1    <---------ARR14(2) <---------GLK1(2)           --------->ATHB12  <-----------GT1     ---   aaaaaaaaactaggggaacgggaaaatctcgacagaatttcagattcagctacaaaattcaaagattgatggagaagaaattactaaaccctaaatgaaa  18403800                            <-----------GT1          <---------ARR14(2)                         <---------YAB1             <------ZmHOX2a(1)                        --------->AHL20(2)       --------->HSFB2a(2)            --------->At4g35610                      --------->ICU4             <---------HSFB2a(2)         ------>ZmHOX2a(1)            --------->MYB52(1)                   <---------LBD16       <---------At4g35610 -------->GT1  ----------->GT1             <---------YAB1              --------->At4g35610      <----   tcgaaaatttgaataaacggagaaatttttataccgatgagacttctgattcgaggaatcgagcgaaacactcatcttcctcatcggaaacagacatact  18403900                                                                                            <-------GAMYB                <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                          =========               ---------->DOF2                                                            <---------ANAC58             <------ZmHOX2a(2)       <---------ANAC58                                     <---------ANAC46            <---------ARR11(3)       <---------ANAC58                                   <------MYB83            <-----------ARR10    <-------GAMYB ------>NtERF2                            <------MYB46(1)     <---------DEAR3(2)         --------->MYB55(2) --------->ANAC58                    <---------DEAR3(1)     <------MYB83         ------>NtERF2      <---------RAP2.6(2)         --------->ANAC58 <---------ANAC58     <------MYB46(1)     --------->DEAR3(1) <---------LBD16              --------->ANAC58<------NtERF2    <---------DREB2C(2)------>NtERF2 <---------ANAC46 ---------->DOF2--------->CCA1(2)===============    <---------DEAR3(1)--------->DEAR3(1)<---------ARR14(2)--------->ATHB12            <--------P    <---------MYB46(3)----------->HVH21 --------->ARR14(2)<------ZmHOX2a(1)          ================ ------DOF2 --------->ARR11(3)  <---------MYB46(3) --------->ANAC58 <----------ID1   <-------GAMYB   tttcagtcggtgaagatcaaagctccgacgacgatggttgcgtttatgcggccaaggaaaggattggagagagacaagactcgagagggttggcgtttgg  18404000            <------------CBF            *TSS      <---------ANAC46      <---------ANAC55(1)      <---------ANAC58      <---------ANAC58      --------->O2      --------->TGA1a      <---------TGA1a      --------->bZIP60(1)      <---------O2                                                          <---------AHL20(2)      <---------bZIP60(1)                                                --------->AHL20(2)     <------NtERF2                                                       --------->AHL20(1)     <-----------------------TaNAC69(2)                                  <---------ARR11(3)    ------>NtERF2                                           --------->TOE1(3)      XXXXXXXXXXXXXXXXXX   --------->ALFIN1--------->ATERF1(1)                      <---------MYB59 --------->AHL20(2)   <---------DEAR3(1)                                       --------->TOE2(3) --------->YAB1   ------ ===============MYC_MYB                  <---------YAB1    <-----------------AGL1<---------AHL20(2) ===============MYC_MYB               --------->ICU4       ----------------->AGL1--------->AHL20(2) ===============MYC_MYB         <------NtERF2              ----------------->AG --------->AHL20(2)  -   aatcggtggcgtgagattggagacgacctcgggccgaataattttgataaatgggctaataacctaaatgggccatatattaataaataagcccataaca  18404100                                                                                     <---------ANAC55(1)                                                                                   <-----------GT1                                                                                <---------ICU4                                                                                --------->YAB1                          <---------ICU4                                       --------->ICU4                     <-----------TGA1                                          <---------YAB1       ------>ZmHOX2a(1) <---------YAB1                                      -------->ATHB1      <---------ALFIN1   --------->ICU4                    <-----------GT1   --------->ATHB51  ------->GAMYB   <---------DOF5.7(2)                 <---------AHL20(2)     <---------ICU4 XX>MIR4240     --------->DOF5.7(2)                   --------->AHL20(2)     <--------HAHB4      <--- --->ZAT6       <---------MYB52(1)              --------->ANAC55(2)          --------->YAB1--------->MYB52(1) ------->P   ---------->ID1             <----------DOF2<---------AHL20(2)   --------->ICU4 <---------DOF5.7(2)   ctaaccctcctccttgtcgttagcgtcattaatacaaattagctttctaaacgtgattaaataacaacatttttctgaattattattacgagttaacgac  18404200                          <---------------AGL15                          ======================================================================MADS_MADS                          ====================================================MADS_MADS                          --------------->AGL15                  --------->AHL20(2)                          <---------DAG2   <---------------AGL15                  <---------AHL20(1)                          --------------->AGL15    ==============                  --------->AHL20(1)                          <---------------AGL15  <---------TOE2(3)                  <---------AHL20(2)                          <----------DOF2  --------------->AGL15                 <---------AHL20(2)                  --------->ANAC58         <-----------------AG <-                 --------->AHL20(2)                  --------->ANAC58 <------ZmHOX2a(1)<------ZmHOX2a(1)              --------->YAB1                       <------ZmHOX2a(2)<---------TOE2(3)<---------TOE1(3)              <--------HAHB4                       ==========================HOX2a_HOX2a   ----------             <---------YAB1                 --------->ATHB12  ==================================MADS_MADS ------SPL7--------->YAB1--------->TOE2(3) <---------YAB1 <---------MYB111(1) <-----------------AGL1   gttcgaactactactataattaaattttcttaaaacagaacatttgttattggatcagcaactactttttaaggagttttttcatttaaggaaatgttat  18404300     <---------ARR14(2)     <---------ARR11(3)                   ------>MYB83        --------->ICU4              -----------     --------->ARR14(2)                   ------>MYB46(1) --------->At5g28300 <---------ARR14(2)     --------->AGP1                  <-----------GT1 <---------ZAT14    <---------HSFB2a(2) ============HOX2a_HOX2a         <-----------ARR10  <-----------GT1--------->MYB59    <---------ARR14(2) ----------GT1           ---------->DOF2<---------MYB59  ----------->GT1--------->HSFB2a(2)        <- ->GT1<------ZmHOX2a(2)  --------->MYB52(1)      <---------ICU4<---------ICU4 --------->ARR14(2)<----   attactagatccactaatcgacataaataaaggcatattttaccaacttcagtattacactgtaaaaattaggcctggaagttcggcataacccgtttaa  18404400             --------->TOE2(2)             --------->DEAR3(1)            --------->DEAR3(2)                                 <------MYB46(1)          --------->MYB52(1)                                   <---------ANAC46        --------->MYB46(3)                                     <------MYB83      ------>MYB83                                             ----------->GT1    <---------MYB59                                           <---------MYB46(3)   --------->DEAR3(2)                                         --------->MYB59 ------>MYB83--------->TOE1(2)                               --------->SPL7 ------>MYB46(1)                                   ----------->GT1                        <---------LBD16 --------->MYB52(1)                              <-------GAMYB--------->MYB46(2)       <----------DOF2 >GT1 ------>MYB46(1)                           <-----------RAV1(1)       <---------AHL20(2)      <-- --------MYB59           <----------DOF2   <----------DOF2  <---------MYB52(1) --------->ATHB12 <---- -------GT1 --------->MYB46(3)            <---------GLK1(2)<---------SPL7--------->AHL20(2)<---------ANAC46   accgaaccgaacaaaccgacgatttcggttttcggtttcaaaccgattttctgttgtaaatcgttcggtagaattttaaattgatttcggttttcgggtt  18404500  Previous    Next  AGI:  At5g45360.1    Description:  F-box family protein. Identical to F-box protein At5g45360 [Arabidopsis Thaliana] (GB:Q9FHK0;GB:Q84TE4); similar to unnamed protein product [Vitis vinifera] (GB:CAO63738.1); contains InterPro domain UL92 (InterPro:IPR004289); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 18401748    to: 18404012    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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