Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------ANAC58                                                                                          <---------bZIP60(2)                                                                                  --------->MYB52(2)                                                                                <---------MYB52(1)                                                                              --------->bZIP60(1)                                                    <-----------GT1           <---------bZIP60(1)                                                 <---------ICU4              ----------->STF1           ---------->DOF2                      --------->ICU4              <---------TGA2(2)      --------->ICU4                          --------->AHL20(2)           ----------->HVH21      <---------YAB1                         <---------AHL20(2)          --------->At4g35610---------    --------->YAB1                           --------->AHL20(2)          --------->CCA1(2)<---------ANAC58   <-------TEIL      <----------ID1   ----------->GT1  --------->HSFB2a(2) ----------->TGA1 --------- ->LBD16 <---------YAB1  ---------->DOF2   --------->YAB1           ---------->DOF2 <---------ZAT6   attgattcatgatcaaagaaacagagacaaagaaaatgttgagaaaaataatttttaccagaatataaggcaaagagatgacgttagtgatgacgagcca  18354200                                            <---------HSFC1(2)                                            --------->HSFB2a(1)                                  <------NtERF2                                  ------>NtERF2                                  --------->LBD16                                 --------->DEAR3(1)                                 --------->RAP2.6(2)                                 --------->RAP2.3(2)                                <------NtERF2--------->DEAR3(1)                                --------->ATERF1(1)                                --------->RAP2.3(1)                               ------>NtERF2--------->HSFC1(2)                               <---------RAP2.3(1)                               --------->ABI4(1)                               <---------ATERF1(1)                              <---------ATERF1(2)                                               <----                              --------->ANAC46--------->ORA47(1)                        --------->MYB46(3)               ------->GAMYB  <---------DEAR3(1)                                       ------>MYB83              --------->ANAC58--------->DEAR3(1)                                       ------>MYB46(1)              --------->ANAC46--------->ATERF1(2)                                      -------->P              --------->ANAC58--------->RAP2.3(3)                                      --------->MYB52(1)             ------>MYB46(1) --------->RAP2.3(1)                                      --------->MYB55(1)             ------>MYB83    --------->DEAR4(2)                                       --------->MYB52(1)            --------->MYB52(1)--------->RAP2.3(2)          --------->GLK1(1)         --------->AtMYB61           --------->TOE2(2) --------->ERF1 <---------HSFB2a(1)                      --------->MYB46(3)           ------->GAMYB--------->ATHB51    --------->DEAR3(2)                   --------->WRKY38(1)           --------->TOE1(2) --------->ATERF1(1)        ----------->GT1          --------->WRKY12     --------->AtMYB61  <---------ICU4---------->DOF2  ----------->GT1           ----------->HVH21 >ANAC58  --------->MYB46(3) --------->ORA47(2)   ---------->DOF2        --------->ANAC58       <---- >ANAC58  <---------MYB52(2)<---------ATERF1(1) ----------------->AGL1   --------->ANAC58------->GAMYB   ttgaacaccataaccaacgaaacccataatcgccgccgcgaaaagaaccgtccaaagagggaaatacaagagtgcaagtcccgatgaccaaccgaaaact  18354300                  <------NtERF2                 ------>NtERF2                --------->DEAR3(1)                <---------DEAR3(1)               --------->ATERF1(1)              --------->MYB52(1)       ------>ZmHOX2a(2)      <------ZmHOX2a(2)      --------->CCA1(2)      --------->ARR14(1)     --------->ARR14(2)                                                                           ---     <---------ARR11(3)                                                                         <----     --------->ARR11(3)                     <---------GLK1(1)                                  <-----     <---------ARR14(2)               --------->TOE1(2)                              --------->GLK1(1)     --------->AGP1                  <---------ANAC58                            <---------HSFB2a(2)   ----------->ARR10   <---------ARR11(3)   --------->GLK1(1)                    --------->HSFB2a(2) -----DAG2   ----------->HVH21       <---------ANAC58<<<<<<<ZML2          --------->ARR14(2)   <----- ------DOF2 --------->DEAR3(2)   --------->YAB1   --------->HSFB2a(2)     <---------ARR14(2)  <------   ttaccaagatccgaagcgacggcgagataattcaattgtacttgcgaaatccctagaaccgatttcaaattcgacgaatacgtcgagaaatcgaaattcg  18354400                                                           --------->LBD16                                                           ------>NtERF2                                                          --------->ANAC58                                                          --------->ANAC46         <---------ANAC58                                 --------->ANAC58         <---------ANAC58                                <---------LBD16  --------->At5g28300          --------->HSFB2a(2)  <---------WOX13(1) --------->LBD16               <---------HSFB2a(2)--------->ATHB12 ------>MYB52(1)             -------->P          <---------YAB1                                   <-- -----SPL7          --------->ARR14(2)         --------->ANAC55(2)        --------->AtMYB61    ------ ----ANAC58         <---------ARR14(2)         <---------ANAC58           <---------ALFIN1    ------- ----ANAC58         <-----------ARR10          <---------ANAC58          --------->MYB46(3)   ------- -TEIL  --------->ATHB12  <---------DEAR3(2)   <---------ANAC46  <----------DOF2     <-----------GT1<   taccggtgaatgcttgaatccaaatcgtcgctaccagaatcatccattttcgtgattgtcccgccatctttttcgaccaccgtgttttcacaatctccga  18354500                     --------->ARR11(3)                     <---------ARR11(3)    <---------ARR14(2)    <------------------------ANAC81    --------->ARR14(2)--------->GLK1(2) -------SPL7       ----------->ARR10                                                               -- >NtERF2------>ZmHOX2a(1)<---------YAB1                                                     --------- ---->HVH21      --------->LBD16                                                           <---------HSFB2a(2) -->DEAR3(1)   <---------LBD16                                                            ----------- -------TEIL <-----------GT1                                                            ------->TEIL   cgtacagttcctgattcaccggagattttgattttgttttttgtgttctctctcactcgtttgattcgagcttcttcacttgtttcgacgaatcgagaaa  18354600                                   <---------ANAC46                                   --------->ANAC55(2)                                   <---------ANAC55(2)                                   <---------bZIP60(2)                                   <---------O2                                   <---------ANAC55(1)                                   <---------ANAC58                                   <---------ANAC58                             <------MYB83      --------------->AGL15  <------MYB46(1)               --------->WOX13(1)           --------->LBD16   <------ZmHOX2a(1)         <---------MYB46(3)      ----------->GT1        ------------>CBF  <----------ID1         <-----------RAV1(1)        >>>>>>>GRF7  --------->MYB46(3) <-----------GT1 -------->DOF2         --------->YAB1              <-----------RAV1(2)      <---------ATHB12 <------- -->GT1*TSS           <---------ATHB12           <-----------HVH21   --------->GLK1(1)<---------LBD16 >GT1 <---------------AGL15<--------P     --------->At4g35610  --------->MYB52(1)  <-----------GT1   aaaaaggactaaatagagaaacaaatcatgttggtttacgtggcatcttcatgtcaggtataaatcaaccgatatcgaatcaattttacccggtttagtt  18354700                                                                                                  <--                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                    --------->ARR11(3)                                                          -----                  <---------YAB1                                                                -----                --------->YAB1                                                                 <-----                <---------ICU4       ----------->GT1                                           <-----               --------->ICU4      ----------->GT1                                  --------->TOE2(3)             --------->YAB1   <------MYB83 ---------->DOF2              --------->DAG2 --------->AHL20(2)            <---------YAB1    <------MYB46(1)                          ---------->DOF2 --------->YAB1 -----------------ANAC81     --------->MYB59--------->DAG2 <-----------HVH21  <---------ZAT6   ------   ttgtttgtttgattttcattatgattttggttcggtattgagaaaaaaagttgaaaaccgaggtcacatcaaataaagtagtattacattaatatcaata  18354800   ------>ZmHOX2a(2) <---------ARR11(3) --------->ARR11(3) -------WOX13(1)            -------->HAHB4                          --------->DAG2 ---->YAB1                  <--------ATHB1                      --------->YAB1 -----ICU4            --------->TOE2(3)                      --------->YAB1 --->ATHB1      <------MYB46(1)      <---------YAB1          ----------->GT1 ----ATHB1      <------MYB83<---------ICU4              --------->AHL20(2) ---->ATHB12  <--------P   --------->ICU4             <----------DOF2                               - ---->ATHB51 <-------GAMYB <---------ATHB51           --------------->AGL15                         - ----ATHB12 --------->MYB55(2)       --------->ICU4   <---------------AGL15            <---------AHL20(2) ----ATHB51 <---------MYB46(3)  <-----------GT1      <-----------------AGL3           --------->AHL20(2) --->ICU4<----------DOF2 --------->YAB1         <---------TOE1(2)  ---------->DOF2<---------YAB1  <--   attgatctcttctttggttggaaacattaataattcaccataattcatcacatgttcttttaatagtaataaagttgagaaattttcatttaatagatta  18354900                                                                                                 ----                                                                                                 ----       --------->YAB1                                                                    <---------HSFB2a(2)      <---------YAB1                                                 --------->WOX13(1)  --------->HSFB2a(2)  <----------DOF2                                                  <---------ATHB12     -------------  <---------DAG2                <------MYB46(1)                  --------->GLK1(1)    --------->ARR14(2) ----->MYB46(1)                 <------MYB83               --------->ARR14(2)         <---------ARR14(2) ----->MYB83      --------->ANAC46                         <---------ARR11(3)  ---------->DOF2   ---- -------MYB59 <-----------GT1  <---------TOE1(2)           --------->GLK1(2) --------->AHL20(2)<-----   ccaactttttgataatttacaaaccagtattgctaggtttgggcaaaaaactaaaatccaaaatctgaaatcaatccaaaaaaatgcggttccaaaaccg  18355000                                                                                                 ----                                                                                                 <---                                                                                                -----                                                            <---------MYB59                     ----- -->MYB46(1)                                                --------->TOE2(3)                   <---- ----->MYB52(1)                                             --------->TOE1(3)                   <---- ---->AGL1                       <---------YAB1           ------->TEIL                 <---------ARR11(3) -->MYB83    --------->YAB1    --------->AHL20(2)    --------->At4g35610               --------->GLK1(2) ----MYB59  <---------YAB1     --------->YAB1--------->ANAC46     --------->MYB52(1)  --------->RVE1(1)   aaccgaatcaaattgtcataaaactcgaacaaattataaatgtttctactcaattatctgaacctaaaaaaccgaatagtacatctaaaaatctgaaata  18355100  Previous    Next  AGI:  At5g45275.1    Description:  similar to nodulin-related [Arabidopsis thaliana] (TAIR:AT4G19450.1); similar to NFD4 (NUCLEAR FUSION DEFECTIVE 4) [Arabidopsis thaliana] (TAIR:AT1G31470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63775.1); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196); contains InterPro domain Nodulin-like (InterPro:IPR010658) Range:  from: 18351632    to: 18354607    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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