Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                              <---------------AGL15                     ----------->GT1                                              <----------DOF2                       <---------AHL20(2)                                      --------->AHL20(2)                          <---------YAB1                                     --------->AHL20(2)                         <---------CCA1(1)                                     <---------AHL20(2)                        <---------ARR11(3)                                  --------->AHL20(2) --------->ANAC55(2)       --------->ARR11(3)<---       ----------->GT1 ------>ZmHOX2a(1)   <-----------GT1          --------->YAB1<---------AHL20(2) ----CCA1(2)   --------->AHL20(2)--------->AHL20(2)  <---------ANAC55(2)      <<<<<<<<<RAP2.2    ----   tctcacatatgtttaaaaaaaattcctacaaaacaataaataaataaactttattaagtgataaactttagaataattttagatattattttgttaaatt  18330500                                                                            <---------YAB1                                                                         --------->AHL20(2)           --------->AHL20(2)                                            <---------AHL20(1)          --------->AHL20(2)                                             <---------AHL20(2)        --------->YAB1                                               --------->AHL20(2)    >>>>>>>>>RAP2.2                                                  <---------AHL20(2)  --------->ARR11(3)                                                <---------AHL20(1)  <---------ARR11(3)    ---------->ID1                              --------->AHL20(2) -AHL20(2)<---------AHL20(2) ---------->DOF2                        --------->AHL20(1) ------AHL20(2)     <----------DOF2              --------->YAB1     <---------AHL20(2) ----->AHL20(2)<-----------GT1             --------->YAB1  --------->ARR11(3)             <----------   ttaatatctaaaataaataactctttgtctcaaaagtagttgaaaacataatgagaattaagaactcgaatttattttatttttaagtgttttttctaaa  18330600                                                                                 <---------AHL20(2)                      <---------ARR11(3)                                      <---------ICU4                      --------->ARR11(3)                                     --------->ICU4                --------->YAB1                                           <---------AHL20(2)               <---------YAB1          --------------->AtSPL8            --------->AHL20(2)             --------->YAB1          <---------ARR14(2)                  --------->AHL20(1)            <---------YAB1           --------->ARR14(2)                  <---------AHL20(1)         <---------AHL20(2)          --------->GLK1(2)                  --------->YAB1             --         --------->AHL20(2)         <---------GLK1(2)                <---------ICU4          --------         --------->AHL20(1)   <---------YAB1                 --------->AHL20(1) <---------YAB1    ---         <---------AHL20(1)<---------AHL20(2)               --------->YAB1<---------YAB1  --------->YAB1 -GT1<---------AHL20(2)  <----------DOF2        <------------CBF  <---------AHL20(2) <---------AHL20(2)   ttttgttttaatttattatgaaaacatcttttattttagaatctgtacaaaattgtattcaaacatattaaaaattataatttttattttaaaaataaag  18330700                                                                                              -------                                                                                              =======                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                        <---------At5g28300                                                                                      ----------->HVH21                                                                              <---------At4g35610                                                                            <---------WRKY38(1)                                                                            <---------WRKY45  -------                                                                           --------->WRKY18(1)-------                                                                     <---------ARR14(2)<-----------GT1                                                                     --------->ARR14(2)<---------WRKY18(1)                                                                  --------->YAB1      --------->WRKY38(1)                                                                ------>MYB83<---------WRKY12 --------                                                           <-----------GT1<-----------HVH21 <-------- ------->DAG2                                --------->ARR11(3) --------->MYB52(1)    --------->WRKY12 -->DOF2                  ---------->DOF2    <---------ARR11(3) ------>MYB46(1)     <------------CBF ------->DOF2  --------->AHL20(2) <--------P<---------GLK1(2) <---------MYB59 --------->At4g35610   aaaagtgtatttttcaaataaaaactgataaagagggtagttttcaaaatctcccatgaattaaccaaacagaactggtcaactggaattgaccgcacgt  18330800     --------->DOF5.7(2)   <---------ANAC46   <---------ANAC58   <---------ANAC58                                                           <---------YAB1 -->ANAC46                                <---------ICU4             <---------SPL7 ==========================================bZIP_DOF                 <---------ANAC58 -->O2                                  --------->GLK1(2)           <----------DOF2 -->TGA1a                               --------->ARR11(3)          <---------DAG2 ---TGA1a                             <---------AHL20(2)            <---------ANAC58 ---O2                            --------->AHL20(2)           <---------HSFC1(2)                   < -->ANAC58                      <----------DOF2              <---------ARR14(2)         ------------- -->ANAC58                      --------->TOE2(3)           <------ZmHOX2a(1) <---------TOE2(3)  <--- ->SPL7                      <-----------GT1 <-----------HVH21 --------->HSFC1(2)       <------------ -ALFIN1                     <---------AHL20(2)       --------->CCA1(2) <---------YAB1 --------------   ctcatgcgtttactatttctaatacacatatttactttaaataatcttgtcagaagttatgaggaaactgccttacgattaagatagcttctatatagag  18330900                                                              ----------->RAV1(1)                                                          --------->ANAC46                                                          <---------ETT(1)    <---------ANAC58 --------->WOX13(1)            --------->ANAC46    <---------ANAC58<---------AHL20(2)             ------>MYB83                 <---------ICU4 ------------CBF    --------->AHL20(2)             --------->AtLEC2             --------->YAB1 -->AGL15          <---------ATHB12                --------->ANAC58       ----------->RAV1(1)       - ---ZmHOX2a(1)     --------->AHL20(2) ---------->DOF2  -------->P        --------->ANAC46       <---- ---AGL15        XXXXXXXXXXXXXXXXXXXX>MIR862-5P    ------>MYB46(1)    --------->TOE1(2)         <---- --->AGL3      ------------>CBF----------->GT1     --------->ANAC58   --------->TOE2(2)   --------->ATHB12   gacattgggtttgaggctccaataaatcaaacatggataaaaaagaagaaaccaagcaacccgacaacataatctacgacaaaaatgactcatcagtggc  18331000                                                                                                   --                                                                                                 ----                                                             <---------AHL20(2)                 <----                                --------->At4g35610         --------->AHL20(1)                  <----                                <---------ZAT14      <---------LBD16                            <----           -------->P           <---------ZAT2       <---------HSFB2a(2)                        <----        --------->ZAT2<------NtERF2              --------->ARR14(2)                             <----        <---------At4g35610     --------->ZAT14  <---------GLK1(2)                              -----        --------->At4g35610     <------NtERF2    <---------ARR14(2)   <---------GLK1(2)    <---------     <---------At4g35610        <---------At4g35610  --------->HSFB2a(2)                   --------->HSFB2a(1)   --------->REM1(1) --------->LBD16        --------->ANAC58--------->AHL20(2)            ------->TEIL -------->TOE2(3)   <---------ANAC46        --------->ANAC58<---------AHL20(1)         --------->ANAC58 -----ANAC58        <---------ANAC58       --------->WOX13(1)--------->AHL20(2)        --------->ANAC46 -----ANAC58        <---------ANAC58  <------ZmHOX2a(1)     <---------AHL20(2)         --------->ANAC58   ttccttcatcagctacctcatggcgggttttggctgcagaggaatcaagcagtttctcggaatttatttagtgattctctctagagactacgcatcttcc  18331100                                                                                                <----                                                                                                -----                                                                                      --------->TGA1a <---------ANAC58                                           <---------MYB52(1)        <---------O2 <---------ANAC58                                          --------->LBD16            --------->O2 ------->REM1(2)                                         <---------LBD16              <---------ANAC58 ----->LBD16                                           <---------ARR14(2)             =============== -----ANAC55(2)                                        --------->ARR14(2)             <---------TGA1a -----ANAC46                                         <---------MYB46(3)               <---------ANAC58 -----ANAC58                    --------->bZIP60(1) --------->ALFIN1               <---------SPL7 -----ANAC58                    <---------bZIP60(1) <---------AtMYB61              ----------->HVH21 -----ANAC55(1)              ----------->TGA1--------->CCA1(2)                    ------>ZmHOX2a(2) ---->ANAC55(2)              ----------->HVH21    <---------bZIP60(2)  <---------REM1(1)      ------- -TaMYB80    --------->GLK1(2)  <----------ID1    <---------ANAC46     <---------ANAC46 --------->ALFIN1   gtgttgtgcctagagaacctcgaattatgctgtgacgacaagaagagctatgaggtggttccggtgttctatggtgtaagtcgatcggacgtgaggcaac  18331200                                                                    ----------->HVH21                                                         ----------->HVH21------->TEIL                                                       <---------ANAC55(2)<---------TOE2(2)                                                    <------ZmHOX2a(2)  --------->ANAC58        <---------MYB52(1)                         <---------ARR14(2)  --------->ANAC58      <---------ANAC46           ---------->DOF2   --------->ARR11(3) --------->ATERF1(1)     <------NtERF2          --------->ZAT2    =============HOX2a_HOX2a<------NtERF2    ------>NtERF2           <---------ZAT2<---------ARR14(2)        <---------RAP2.3(3)   <---------PCF5        ---------->DOF2  --------->ARR14(2)        <---------DEAR3(1) -----MYB52(2)    <---------ANAC58   <-----------HVH21 --------->ANAC55(2)<---------TOE1(2) ---->MYB46(3)    <---------ANAC58  ----------->GT1<---------ARR11(3)<---------ATERF1(1) ===================================bZIP_DOF  ------>ZmHOX2a(1)  --------->ALFIN1 ---->RAV1(1)     <---------ANAC46 --------->DAG2 <---------At4g35610------>NtERF2                ---   aatcggggccgtttagtgatgcgttcacaaagctggaaaggtcaaatcctgcagatcatgtgactaagtggcgacgcatgtttgcgaaaatagcagaact  18331300                                                             --------->TOE2(3)                                           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <----------DOF2                                      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->ICU4                         <---------TOE1(3)xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        <            <---------YAB1           ------------------------>ANAC81--------->At5g28300             <      --------->ICU4     <---------TOE2(3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <-----------GT1     < ------->DOF2--------->YAB1   ----------->GT1                --------->TOE1(3) <-----------GT1 <-----   aaaaggccatgagtatgatgaagaattaaggtatgtgaaaaaaaaaaaaaaaaaaaaaaaaaaccttcactgtaattctttttaacccctaatttgactt  18331400  Previous    Next  AGI:  At5g45240.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51560.1); similar to disease resistance protein [Phaseolus vulgaris] (GB:ABA00702.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain NACHT nucleoside triphosphatase (InterPro:IPR007111); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 18330933    to: 18336316    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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