Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <-----------HVH21                                        <---------ALFIN1    <---------ANAC46             <----------DOF2        <---------ALFIN1               --------->MYB46(3)   --------->ETT(1) --------->HSFC1(2)       --------->MYB46(3)   <---------ANAC58       <---------LBD16           <---------HSFC1(2)  --------->TOE2(3)         <---------ANAC58    <---------GLK1(1)            --------->HSFB2a(1) -------GT1               <-----------GT1  ----------->RAV1(2)  --------->GLK1(1)     <---------ALFIN1 -AGL3<-----------------AGL1----------->RAV1(2) --------->GLK1(1)         ---------->DOF2<---------DAG2   actatctcaaccacttgggcaaaataagttacctgctcttatccaccctgatacccggtctgtcggaaatcgacttcaaagcttccttccacttttccat  18317900                                             <------NtERF2             ------>ZmHOX2a(2)                      --------->LBD16        --------->At4g35610      <------ZmHOX2a(2)          ----                     --------------------->WRI1                      --------->ARR14(2)          ----                    ------>ZmHOX2a(2)        <---------At4g35610     <---------ARR14(2)        ------                   <------ZmHOX2a(2)       <---------ZAT18       <---------ANAC46          ----------                  --------->ARR14(2)     <-----------HVH21     <---------MYB46(3)      ------>ZmHOX2a(2)                  <---------ARR11(3) ------>MYB83             --------->ALFIN1        <------ZmHOX2a(2)                  --------->ARR11(3) ------>MYB46(1)       <---------DREB2C(2)       --------->ARR14(2)                  <---------ARR14(2) --------->MYB52(1)    <---------DEAR3(1)        <---------ARR14(2)                 <---------At4g35610<---------ZAT14     ----------->TGA1             --------->ARR11(3)                 --------->At4g35610--------->ZAT14     ----------->HVH21            <---------ARR11(3)        <----------DOF2            <---------MYB46(2) --------->At4g35610      --------->HSFB2a(2)  --------------->AtSPL8           --------->DEAR3(1) <---------At4g35610      <---------HSFB2a(2) <-   taatccagtactttctctcagatccctgaatgcatcaccgaactgtccgctcaggcctctgacggtggagggatccaacttgtagaagatcggaatagcc  18318000                                              --------->ANAC58                                              --------->ANAC58                      <---------AHL20(2) --------->REM1(1) -->NtERF2     --------->LBD16       --------->ZAT2                    --------->ZAT2 ------->RAV1(1)<---------ALFIN1     --------->At4g35610           ------->TEIL --->MYB46(3)<---------LBD16     -------->P ---------->DOF2   <---------ANAC46   --------->ARR11(3) >DOF2  <----------DOF2        <---------ETT(2)--------->MYB46(3)<---------ZAT18 <---------ARR11(3) ----------RAV1(2)    --------->ATHB12  <-------TEIL    <---------YAB1 <---------ZAT2         <------   accagatggtctttctccgcacatttattgatgtctaccagcttcatcaagcaccattttgattctgtgtacctgctggtgaagataaccagaacgatta  18318100                                                                    <---------TOE1(3)                                                                    <---------TOE2(3)                                                 ---------->DOF2   <---------DOF5.7(2)                                               <---------------------WRI1                                          ------->TEIL           --------->DOF5.7(2)                                      <-------MYC2              --------->TOE2(3)                                      ------->MYC2        ---------->DOF2                                      <-------MYC3     ----------->RAV1(1)                 --------->YAB1 ---YAB1                              ------->MYC3    --------->ZAT18     <----------DOF2 --------->ICU4   tcgactctattctgttcgatagtctttctactggttcgcatatgcatccattgaagcccacaaagacgttaatgttctttttttccaaggccatgatgag  18318200                               <---------TOE2(3)                             ---------->DOF2                <---------ARR14(2)                         <---------MYB52(1)             <------NtERF2                  ----------->HVH21                    ------>NtERF2                <---------ANAC55(2)                   --------->ALFIN1                         <-----                <---------ANAC58                   <---------DEAR3(1)                          <-----                --------->ANAC55(2)                <---------ANAC58                            <-----                <---------ANAC46                   <---------ANAC46                      <------NtERF2        ------->TEIL   ----------->GT1        <-----------RAV1(1)                  --------->DAG2   --------->At4g35610------>ZmHOX2a(2)      ------->TEIL   --------->ARR14(2)    ---------->DOF2   <---------At4g35610==================HOX2a_HOX2a<---------ANAC58            <------ZmHOX2a(1)    - <--------P     <---------ANAC58 <------ZmHOX2a(1)<---------LBD16      >>>>>>>>>TBF1   --------->RAP2.6(2)   atggtagatgaatcccatgcgtgatccgttataaaggatgaaaactgtatgttgcggtggcagttctaccgaagaagaagaggataaagtcgccatggcg  18318300                ------>ZmHOX2a(1)                <---------YAB1          --------->HSFB2a(1)     <------NtERF2     --------->ATERF1(1)     <---------------------WRI1    <---------ATERF1(1)    --------->LBD16    ------>NtERF2   <---------DEAR3(1)   --------->ATERF1(2)         --------->LBD16   --------->DEAR3(1)    <---------MYB46(3)   <---------ATERF1(2)  <--------P  --------->ATERF1(1)  <-------GAMYB                                                           ------ ----ANAC58     --------->ICU4<---------ANAC46                                                <------ ----ANAC46    <---------MYB59<---------TOE1(1)                                               ------- ----ANAC58   ----------------->AGL1 <------------CBF              --------->TOE2(3)         -------- -------->GLK1(2) <------------CBF<-----------HVH21             ----------->RAV1(1) <----------DOF2   agaagccggcgaacagtcctaattgggttgttccgaggtcattgcaagttgaatcgtctagtaagacaacattagtttttttttttcttttacaaattaa  18318400                                                                             ---------->DOF2                                                                       <-------GAMYB                                                                      <---------MYB46(3)                                                                   ============MYC_MYB                                                                   <---------ANAC46                                          --------->LBD16          <---------bZIP60(2)        -------                                         <---------ANAC58          <---------O2               <------                                         <---------ANAC58          =====================bZIP_DOF                            <---------AHL20(2)                     --------->O2               ------- --->WOX13(1)               --------->AHL20(2)  <-----------HVH21  --------->TGA1a      <------ZmHOX2a(1) ---AHL20(2)               --------->AHL20(2)  <-----------RAV1(1) <---------TGA1a  --------->ICU4 -->AHL20(2)      <---------YAB1  --------->TOE2(3)             ----------->HVH21 --------->YAB1    < ->AHL20(2) <---------ARR11(3)  <---------AHL20(2)  <---------ALFIN1 --------->ALFIN1  ----------->GT1   tcaaatggcaacttgatattttcattagatttaattcattaatccgtggctgtcgcacttgaatgagcgacgtggttgtaaaagtcataaggaaaataaa  18318500                                                                                   <------MYB83                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                   <------MYB46(1)                                                                                  <------MYB46(1)                                                                                  <------MYB83                                                                                  --------->MYB59                                             <---------ANAC58           --------->ANAC58                                         <---------GLK1(1)          <---------ARR14(2)                                         --------->GLK1(1)          <---------ARR11(3)                                        --------->ARR14(2)          --------->ARR14(2)                                        <---------ARR14(2)          <-----------ARR10         --------->MYB52(1)         <------NtERF2                   --------->ARR11(3)        --------->TOE1(2)         <---------ATERF1(2)          --------->ZAT14    <---------MYB46(3)       <---------MYB52(2)       --------->At4g35610            <---------ZAT18  <--------P --------->TOE2(3)              <---------ZAT2           <<<<<<<<<<<<<<<<<LFY --------->ATHB12 <---------MYB59                --------->STY1(2)     <------------CBF  --------->ANAC58 -->AHL20(1)                    <---------STY1(2)   <---------AHL20(2)  --------->ANAC46 ---AHL20(2)                    --------->ZAT2     <---------AHL20(2) ------>ZmHOX2a(2)        ------ -->AHL20(2)     <----------DOF2<---------At4g35610--------->AHL20(2)<------ZmHOX2a(2)   <----------- ---------ANAC55(2)        --------->ARR11(3)<---------ANAC58 --------->ALFIN1<---------MYB46(3)   atacctaaaacgaacgagactttgtcgaagagctagctggcagaaatgcgtttttaaattgacagtggacgatctcgccatggttgggttcgattgccga  18318600                                            ----------->GT1                                           --------->DAG2                                          ---------->DOF2                                     --------->ANAC58                                     <----------ID1              --------->At4g35610               <----------DOF2       --------->ANAC46           --------->GLK1(2)  <-----------GT1                    --------->ANAC58<---------ARR11(3)       ---------->DOF2 >NtERF2       <---------DAG2        ----------->GT1 <---------GLK1(2)      <---------YAB1          < -CBF       ------>ZmHOX2a(1) <-----------GT1  <-----------GT1  <-----------ARR10        ----------->GT1   gttttttcattctcctactttttggagtttatttacaaaacgcaaaaagttacaagattatttgagcatcttactaatatcaaaggaagaattgttagaa  18318700                                                  <---------YAB1                                                 --------->TOE2(3)                                                <--------HAHB4                                       <---------AHL20(2)                                      --------->AHL20(2)                                           --                                      <---------AHL20(1)  <----------DOF2                         <--                                      <---------AHL20(2) --------->TOE2(3)                        ---                                  <---------AHL20(2)  <-----------GT1                            ----                         --------->GLK1(1)      --------->YAB1                                   <---             <---------YAB1      --------->AHL20(2)<---------ICU4                                ---- <---------YAB1         --------->ARR14(2)     <---------YAB1 ---------->ID1                     <--- -----------GT1    <-----------GT1--------->AHL20(2)--------->YAB1    ---------->ID1   ---------->DOF2   attttcatttccaatatgattttacagaaatgctatttaatttttttttatcattaatacctttgtttttttgttttttttagtaactaaaaagttttag  18318800  Previous    Next  AGI:  At5g45220.1    Description:  Toll-Interleukin-Resistance (TIR) domain-containing protein. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G45060.1); similar to unknown [Arabidopsis lyrata] (GB:AAO42473.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 18316153    to: 18318296    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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