Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <--------ATHB1                              <---------ICU4                              --------->ATHB12                              -------->HAHB4                              --------->ATHB51                             --------->ICU4                             <---------YAB1                             <---------ATHB51                           --------->YAB1                    --------->YAB1          <----------ID1--------->ANAC58                    ----------->GT1        ---------->DOF2 --------->ANAC55(2)            <---------AHL20(2)                    --------        <---------ICU4  --------->ANAC58              <---------AHL20(2)                   <---------MYB52(2)     --------->YAB1<---------YAB1                     --------->AHL20(2)         <------ZmHOX2a(1)   <---------YAB1 <---------ARR11(3)               --------->AHL20(2)        --------->TOE1(2) ---------YAB1    --------->ARR11(3)            --------->TOE2(3)           --------->MYB46(3) ------ --AHL20(2)      --------->YAB1 <---------WOX13(1) --------->ATHB51<---------AHL20(2)  <---------MYB59   ttgttattaataaagacaaatatcataagtaataattgactactactaatccataatttaaaatgttattttttttgaaccaaggactacataactaaca  18261100                                              <---------YAB1                                            --------->YAB1                                            <--------HAHB4                                           <---------ATHB12                                           --------->ICU4                                           <---------YAB1          <---------ICU4                <---------AHL20(2)         --------->ICU4             <---------YAB1 ->MYB52(1)                      <---------MYB52(1)      --------->YAB1       <---------YAB1 --->MYB46(3)                 ---------->ID1<---------ICU4          <---------YAB1                 --   acttgtgactaaagattacaaaacatgttttagtcgttatttttaatcattatagtttatagtaatcgctattattcgttgttattgctaactatgaaat  18261200                             --------->AtMYB61                       --------->ZAT6                       <---------ICU4                               -------->P                      <                      <---------ATHB12                           <---------MYB52(2)                --     <---------------AtSPL8 --------->MYB46(3)           --------->DAG2              --------->GLK1(2) ----->TEIL      ---------->ID1 --------->AtMYB61       ---------->DOF2             <---------GLK1(2)   gaacatggttgtacattttgtcccatcactaccaccaaaatttttggattttgttgaaaaaagggagactaaccatggtttacaaagaatctatgaaata  18261300                                                                   ----------->GT1                                                                 <---------ANAC58                                                                 <---------ANAC46                                                                 <---------ANAC58                                                                <------NtERF2                --------->ICU4                                ---------->CDC5           --------->ANAC46 <---------YAB1                    <---------WRKY12 --------->ANAC58       <----------DOF2                       <---------WRKY38(1)             <------ --------->ANAC58       <---------DAG2                      <-----------HVH21              <---------ANAC58 --------->ANAC46 <-----------GT1                    --------->CCA1(2)                     <---------ANAC46 ---------TOE2(3)--------->YAB1                     --------->AHL20(1)                <-----------RAV1(1) ------->MYB52(1)--------->ATHB51                   <---------ARR11(3)   <---------AHL20(1)<---------ANAC58   ctaacgaaactatacacaattatcgactttattattaagagacatcgtctacaatatatgaaggtcagcgtgtaacatatttttgtttttggggcgtttt  18261400                                                                                             *TSS----                                       --------->ARR11(3)                                   ---------                          ----------->GT1                                               <---------ANAC46                          --------->YAB1                             ------>ZmHOX2a(1)  ----------->GT1 ----DOF2            <----------DOF2   --------->GLK1(2)    <---------YAB1       <-----------GT1-----   tagtattttagacaaatatagggatttatcgtaatttcgataatcttgtggtttttttagttataagtctcctcttgtcatattcacgagccgtataaaa  18261500                                                                                  <-------GAMYB                                                                                 <---------MYB46(3)                                                                                 --------->MYB52(2)                                                                               <---------ANAC46                                                                             <---------MYB46(3)                                                                           <-------GAMYB                              <---------ANAC58                             <---------ANAC58                              <---------ANAC58                            <------MYB46(1)   <--------                           <----------DOF2                               --------->MYB59    ---------                          <---------ANAC58                             >>>>>>>>>CBP60g      <-------- ----->DAG2       <---------MYB52(1)                        ---------->DOF2<---------ANAC58 <-------- -->TBP<----------DOF2    <---------ANAC58                <-------TEIL >>>>>>>>>SARD1       --------- ----->DOF2<------------------------ANAC81               --------->CCA1(2)<------MYB83<---------LBD16   aagttgtttctttcttctctgtttttttgctttcgtcttcaagagagagagagagagagatacaaagagagaaatttggttgtttgttgacggaagcttc  18261600                                 ------->MYC3                                 <-------MYC3                                <---------ANAC58                                <---------ANAC46                                <---------ANAC58                           <---------WRKY38(1)                              <---------HSFB2a(2)                           <---------WRKY12                                 --------->HSFB2a(2)                           <---------WRKY45                            <---------HSFB2a(1) -HSFB2a(1)           >>>>>>>>>ARR1                                    --------->HSFC1(2) >HSFC1(2)            >>>>>>>>>ARR2<---------MYB46(3)                  <---------HSFC1(2)           < -HSFC1(2)          <---------YAB1--------->ALFIN1               --------->At4g35610               -- -At4g35610        <---------TOE1(2)                             <---------At4g35610              --- >HSFB2a(1)      <---------SPL7 >>>>>>>>CAMTA3         <-----------GT1 --------->HSFB2a(1)        <--   ttcggtctctcttctccgtcttacgattgtcaacgcgtggttccatcttcaattttgtttctattttagcagaagtttctcgagcttcaaatactgtttc  18261700                             --------->HSFB2a(2)                <---------ATHB12            --------->WRKY18(1)                                                                     -          --------->WOX13(1) <---------HSFB2a(2)                                                =====        <---------ATHB12    <---------LBD16                                                     <----      --------->WOX13(1)  <---------AGP1                                                 ============    <---------ATHB12     <---------ZAT2                                                  <----------DOF2  --------->WOX13(1)  <---------ANAC58                                            <---------ANAC58  < ------ZmHOX2a(2)     <---------ANAC58          ------->GAMYB            <---------HSFB2a(2)    ===== ------->AGP1 --------->WOX13(1)               --------->ANAC58          --------->HSFB2a(2)  <------ ------>At4g35610--------->YAB1                --------->ANAC58         <---------LBD16  ------>ZmHOX2a(1) -------At4g35610<---------ICU4                --------->ANAC46 <---------AHL20(2)<---------ANAC58<--   agatcaatcaatcagtcaatcatggctagctctggaaacaagaacatcaacgccaaattggtcagtttaattcttctggattttgcttatcctttgaagg  18261800                                                       <---------LBD16                                                  <---------------AGL15         --------->YAB1                          --------------->AGL15   --------->TOE2(3)                             <---------------AGL15  ------>ZmHOX2a(2)                             ----------------->AG <---------MYB59 -------->ARR11(3)    <---------MYB52(1)        ----------------->AGL2           --------->At4g35610 ========HOX2a_HOX2a <-------GAMYB              <-----------------AG ------->GAMYB------>ZmHOX2a(2) --ZmHOX2a(1)     <---------ARR11(3)            ----------------->AGL1  --------->ARR14(2) ========HOX2a_HOX2a------>ZmHOX2a(2)           <-----------------AGL2  <---------ARR14(2) ---------ARR11(3)--------->ARR11(3)            <-----------------AGL1  <---------GLK1(2)          <- ==========================HOX2a_HOX2a          ----------------->AGL3 ------>MYB83           ------- ---TOE2(3)<---------YAB1                       <-----------------AGL3 ------>MYB46(1)       <------- -------YAB1--------->ATHB12          --------->MYB52(2)    <---------KAN4(2)    <---------At4g35610   atgatcgtcaattttgattagatcgttgatttcgatgagttagttctgtttccaatttggggaattttcaaccaaattctctgatctgaaattggatgat  18261900                                                                              <--------P                                                                             <---------MYB52(1)                                                                          ------>ZmHOX2a(2)                                                                 <---------AHL20(2)                                                              <---------ARR11(3)   ------>ZmHOX2a(2)       --------->ZAT6            <---------TOE1(3)  <---------AGP1 --------YAB1             <---------YAB1             <---------TOE2(3)  --------->ARR14(2) -->ATHB12          ----------->GT1                ---------->DOF2      <---------ARR14(2) <---------TOE1(3) --YAB1     <---------GLK1(1)           <---------TOE2(3)     --------->ARR11(3)           <---------TOE2(3)   tgtgatcgaattagaaatcgcatggtttatcagtataaaactagggtttggagtaaaggttatagattttattcgatctggtagttttgttttagggttc  18262000  Previous    Next  AGI:  At5g45130.1    Description:  RHA1. Identical to Ras-related protein RHA1 (RHA1) [Arabidopsis Thaliana] (GB:P31582); similar to ARA7, GTP binding [Arabidopsis thaliana] (TAIR:AT4G19640.1); similar to ras-related GTP-binding protein [Nicotiana tabacum] (GB:CAA50609.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Rab5-related (InterPro:IPR015599) Range:  from: 18261493    to: 18263677    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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