Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------ICU4                                                       <---------ATHB12                                                   --------->AHL20(2)          <---------ANAC58                         <---------AHL20(2)          <---------ANAC46                        <---------AHL20(2)     <---------ICU4                           <---------RVE1(1)    <---------ATHB12                          <---------CCA1(1)      <---------ANAC58 ----->AHL20(2)                              --------->ARR11(3)      <---------ANAC58 ------AHL20(2)                              <---------ARR11(3)      <---------ANAC46 ->AHL20(1)            ----------->GT1      ----------->GT1   ------>ZmHOX2a(1)                     < --AHL20(2)  <----------DOF2              --------->DAG2--------->ATHB12                           -- ->AHL20(2) <---------MYB52(1)           ---------->DOF2-------->HAHB4    ----------->GT1   --------- >AHL20(2)<---------ANAC58  ---------->DOF2--------->DAG2    --------->TOE2(3)              ---------   taaaaaatcattccgtttttatgtatagtcaaaagaaaactgaaaaaggtattttaaatgattcctaaatttcgtatagtcaaaacaaaactgcaagaaa  18235500                                                   <---------AHL20(2)                                                   --------->AHL20(2) ----------->GT1       <------ZmHOX2a(1)                                --------->YAB1   --------->CCA1(2)   ----------->GT1       ----------                               <---------YAB1   <---------ARR11(3)  --------->ANAC46      <---------TOE1(3) ---------AHL20(2)     <----------DOF2          --------->ARR11(3)  --------->ANAC58      <---------TOE2(3) ------->AHL20(2)  <-----------GT1 <---------AHL20(1)               --------->ANAC58<---------ARR11(3) >ANAC58        <---------AHL20(2) --------->AHL20(2)              <---------LBD16  <---------GLK1(2) >ANAC58       --------->AHL20(2)  --------->AHL20(1)              ------->TEIL--------->MYB52(1)   attttatattagctagatttatttccttttgctatgatatattataccaagatataaatagcatttatgcacgggaaaaaataacagattttaaggaaaa  18235600                                                                  <------ZmHOX2a(1)                                                          <---------------AGL15                                                          --------------->AGL15                                                         <---------------AGL15                       <---------ICU4             <---------AHL20(2)                             ----                     <-----------GT1             --------->AHL20(2)                              ----                 <----------DOF2               --------->YAB1   --------->MYB59           --------->ZAT6             <----------DOF2         --------->YAB1      <-----------------AGL1   <-----------GT1---- ->GT1    <---------ARR11(3)        --------->AHL20(2) <-----------GT1 --------->ANAC46<---------CCA1(2)   atagctaaacaatttctttctttaaacattactaacaaataaaaatcaattttaaatttacaaaattaggaatacacaatatttataccatatcactaca  18235700                                                                                            <--------                                               <-----------RAV1(1)                          ---------                                               --------->ALFIN1                         <---------AHL20(2)                                              <-------MYC2                              --------->AHL20(2)                                              ------->MYC4           <---------AHL20(2)<---------AHL20(2)         --------->YAB1                       <-------MYC3           --------->AHL20(2)--------->AHL20(2)        <---------ATHB12                      ------->MYC2       <---------CCA1(1)  <---------AHL20(2)      --------->WOX13(1)                      ------->MYC3       <---------RVE1(1)  --------->AHL20(2)  --------->ANAC58                         <---------TGA1a      --------->ARR11(3) --------->AHL20(1)  --------->ANAC58                         <---------O2         <---------ARR11(3) <---------AHL20(2)  <<<<<<<<<<WRKY18                         --------->O2         <---------AHL20(1) --------->AHL20(2) ----->ANAC58           --------->DAG2     --------->TGA1a    ----------->ARR10    <---------AHL20(1) ----->ANAC58          ==============================bZIP_DOF <---------TOE2(3)   --------->AHL20(2) ----->ANAC46          ---------->DOF2 <-----------HVH21 <---------MYB46(3)   <------ZmHOX2a(1) -----   agtcaagtcaatcaaaaaaaaaaaaaaaagtatacatatacagtcacatgtgctggtgtttgttaagatatttatatataggaaattaatttaaaaaaat  18235800                               --------->HSFB2a(2)                               --------->HSFC1(1)    <---------AHL20(2)                         --------------->AGL15      <---------AHL20(2)                    <---------AHL20(2)              --------->AHL20(1)                   <---------AHL20(1)           <---------AHL20(2)                   <---------AHL20(2)          <---------AHL20(2)                   --------->AHL20(2)    --------->YAB1            <---------DAG2                   --------->AHL20(1)    --------->TOE2(3)      <-----------GT1                  ----         ---------->DOF2 <---------------AGL15 --------->AHL20(2)  <----------DOF2            ------- -AHL20(2)   <------ZmHOX2a(1) <---------HSFB2a(2)  <---------AHL20(1)                  --------->TOE1(3) >AHL20(2)   --------->YAB1    <---------HSFC1(1)   --------->AHL20(2)  <-----------GT1 --------->TOE2(3) ------>GT1 ----------->GT1<----------DOF2 <------------------------ANAC81<-----------GT1------>ZmHOX2a(1)   gtaaaactttcaaaaggataatttattctctttctagaaataatcttattttaatttattcatttttgactttttttctctctctctcttccttaaataa  18235900                                                                                    ----------->GT1                                             ------>NtERF2                --------->TOE1(3)                                       <---------At4g35610              --------->GLK1(2)           <          --------------------->WRI1   --------->At4g35610          <---------HSFB2a(2)           <-- ------>DOF2              *TSS      <<<<<<<<<TBF1                   --------->HSFB2a(2)           --- -->AHL20(2)   <---------GLK1(1) <<<<<<<<<TBF1            <----------DOF2 --------->TOE2(3)      <---   aaagcctccctccatagatttcttcaccagtcttcttcttcttctgcctccaaactctctctttctctctcgagaaccttaagaaaacgttacaaatggc  18236000       --------->ANAC46       --------->ANAC58       --------->ANAC58   --------->ANAC58                                                           <---------ANAC46   --------->ANAC58                            ----------->GT1             <---------ARR14(2) ---------REM1(1)                           ------>MYB83                   --------->ARR14(2) -----GAMYB                                 -------->P               <---------ARR14(2) ------>At4g35610                           ------>MYB46(1)          --------->ARR14(2)          <--- ------MYB46(3)  ------->TEIL              ----------->RAV1(1)  <---------REM1(2)     <---------AHL20(2)   tgttgaagcaagacacatgaatctcttctcttctcaatacattaccaacaggtaaatttcattctcttcacgattcggtttcggtgattttttttttgca  18236100                                                                                           <---------MYB46(3)                                                                                          <---------AtMYB61                                                                                          --------->ALFIN1                                                                                         <------NtERF2                                                                                         <-------GAMYB                                                                                        <---------MYB46(3)                                                                                       <---------DREB2C(2)                                                                                       --------->ALFIN1                                                                                      --------->ATERF1(1)                                                                                      <---------ABI4(1)                                                                                      <------NtERF2--                                                                                     ------>NtERF2<--                                                                                     <---------ATERF1(1)                                                                                     <---------RAP2.3(1)                                                                                     --------->LBD16<                                                                                     <---------ERF1--                                                                                    <---------DEAR3(1)                                                                                    <---------RAP2.3(2)                                                                                    --------->DEAR3(1)                                                                                    <---------ATERF1(2)                                                                          ----------->RAV1(1)    <---                                       --------->GLK1(2)              ------->GAMYB --------->ATERF1(2)                                  --------->LBD16 --------->TOE2(3)  --------->MYB46(3)<---------DEAR3(1)         <---------AHL20(2)      --------->HSFB2a(2)               --------->MYB52(1)<---------DEAR4(2)    --------->ICU4       <----------DOF2  ----------->GT1  <---------ARR14(2)      --------->ATERF1(1) ----GAMYB       <-----------GT1 <---------HSFB2a(2)       --------->ARR14(2)      <---------LBD16---   gttgtattgattttttttgttacatttcttttcttccagagaatgtgttaaatctcaaacgaatatgaacaacggacaacaaatcgccggcggtggtttt  18236200                                    ------>ZmHOX2a(2)                 ----------->HVH21                                   <------ZmHOX2a(2)                  --------->ZAT18           ----------->HVH21       --------->CCA1(2)                --------->ZAT2      --------->MYB52(1)           --------->ARR14(1)               <---------ZAT2    --------->MYB46(3)            --------->ARR14(2)                --------->At4g35610 ------->LBD16                    --------->AGP1              --------->DAG2 -------HSFB2a(2)                 <---------ARR14(2) --------->MYB46(3)                            <- ---------MYB52(1)      --------->ZAT6        --------->At4g35610 <---------ZAT18       <-----------TGA1 --------->GT1         <---------At5g28300--------->MYB52(1) ---------->DOF2            --------->TOE2(3) ------LBD16   ------>ZmHOX2a(2)----------->ARR10 --------->REM1(1) <---------At4g35610 <-----------HVH21 ------>HSFB2a(2)     <-----------GT1     <-----------GT1 --------->YAB1               --------->ANAC46   ccggtaacaatcggtgatcggaatttacagtacatagatccgattaacagcttcaacaaatcagaaagcgagctcacagctatttcaaaacgtcagagag  18236300                                                                 <------NtERF2                                                                <-----------TGA1                                                                ------>NtERF2                                                               --------->bZIP60(1)                                                              --------->RAP2.3(1)                                                             <---------ATERF1(1)                                                             ------>NtERF2                                      --------->ANAC58       --------->LBD16                       --                                      --------->ANAC58      --------->ANAC46                    <----                                    ---------->DOF2         <---------DEAR3(1)                 ------                                   <---------ARR14(2)      <---------LBD16                <----------                             <---------At4g35610      <---------ARR14(2)             --------->MYB52(2)                             --------->At4g35610   <---------ANAC46              <---------ZAT6<----- ------TEIL        <----------DOF2 --------->ARR14(2) --------->ARR14(2)    --------->ANAC46   ------   attcaacgtttgattcagacgctttaatcgcatctcagaaacgcagagcaatcgcgttttctccggcgtcattaatcgacgcagagttagtttcacagat  18236400  Previous    Next  AGI:  At5g45100.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G19700.1); similar to unknown [Populus trichocarpa] (GB:ABK94891.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066) Range:  from: 18235926    to: 18237187    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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