Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         ------>ZmHOX2a(1)                   --------->ARR14(2)                   <---------ARR14(2)                   <---------ARR11(3)            <----------ARF1                                   --         --------->HSFC1(2)                 <---------MYB46(3)     --------->YAB1                  --         <---------HSFC1(2)           --------->ANAC58       --------->HSFB2a(2)               ------         <---------HSFB2a(1)          --------->ANAC58       <---------HSFB2a(2)     <-----------GT1- -ID1    --------->HSFB2a(1)          --------->ANAC46   --------->ZAT18    <---------MYB52(1) <-----   attcagacagaaatttctcaaaatcctcttcatttttcacaagcaatgggtgagacaagtgttctacaaaaatactctgttaacttataactatacgaat  18193700   --------->DAG2                                                         <------ZmHOX2a(1)  ---------->DOF2                                                      <------NtERF2 ------->TOE2(3)              --------->WOX13(1)                     <---------DEAR3(1) ------->TOE1(3)           <-----------GT1                           --------->ETT(1) --->GLK1(1)            --------->ICU4            ---------->DOF2  <-----------HVH21         <------- ----->ZmHOX2a(1)  ----------->GT1         <---------ARR14(2)    <---------AtMYB61       <---------LBD16 ----GLK1(1)    --------->GLK1(2)          --------->ARR14(2) <----------DOF2           ----------->RAV1(2)   tccttaaagtgaagagctattctgtaatatttcaatctaagtgcaaatactctaaaggtagaagcttttggtcggaggaaacaagggtttacctggaggg  18193800                                          --------->ZAT2                                          <---------At4g35610                                        <------NtERF2                                      <---------ANAC46                                      <---------ANAC58                                      <---------DEAR3(1)                                      <---------ANAC58                               <---------MYB52(1)                              --------->LBD16                              --------->At5g28300                              <-----------HVH21                             =================================bZIP_DOF                             <---------O2 --------->At4g35610                             --------->O2<-----------ARR10                             <---------ANAC46                             --------->TGA1a                             <---------TGA1a                                     <---------ANAC46                             =================================bZIP_DOF   <-----------RAV1(1)                          --------->DEAR3(1)                           <----------DOF2                          =============MYC_MYB                      <---------ARR14(2)                  --------->ANAC58   <---------LBD16                <-----------ARR10                  --------->ANAC58 --------->ALFIN1                 --------->ARR14(2)      <---------ANAC46    ------->GAMYB--------->LBD16              <---------ARR11(1)      ----------->GT1    --------->MYB46(3)                         <---------ARR11(3)     <---------MYB46(3)  --------->DEAR3(2)<---------MYB59 ---------->DOF2    <---------AtMYB61 --ANAC46         ----------->GT1--------->MYB52(2)<----------DOF2 <---------CCA1(2)               <-   aaacagatgggtgaaacagcaagtaaaaccgccgtgagtggcggagctaacttctttaacagaaagtccaaatctttgttgtggtttagagaaattgggt  18193900                          <----------DOF2                     --------->WRKY12                                   --------->TOE2(3)                     --------->WRKY38(1)                                --------->TOE1(3)             ------>ZmHOX2a(1)                                          --------->YAB1          ---------->ID1 <---------DAG2                                <---------YAB1       <----------DOF2<---------WRKY18(1)<-------TEIL<-------TEIL     --------->ARR11(3) ----------GT1       ----------->HVH21  --------->CCA1(2)             <---------ARR11(3)         ----   ttttcagttcttttcctcttccattgacctttcgaacaatagatacaaactcacgttcatgtatgaaaccattatcttaacaaaatgtttacatagagag  18194000                                    <------MYB46(1)                                    <------MYB83                                   --------->MYB111(2)                               <---------TOE2(3)                               --------->DAG2          <------NtERF2                      <------ZmHOX2a(1)    ---------->DOF2                            <---------AHL20(2)                  <---------ANAC46 --------->ALFIN1    <---------At4g35610    ---------->DOF2      <-          --------->GLK1(2)  ---------->DOF2           --------->At4g35610--------->At4g35610   ----- ------>DOF2 <-----------RAV1(1)  <--------P          ----------->RAV1(1) <---------At4g35610  <-----   aaagaaatagagaacctgttgggaggaacaaaaaaggttggaggtgaaagaagaggcaccagagagaacaagtctcatctcaaagaattttttttttttt  18194100                                                           <---------AHL20(1)                                                     ----------->GT1                                                    <---------TOE2(3)                                                   ---------->DOF2                                                <----------DOF2                                                --------->TOE2(3)                                              <---------YAB1          <---------ALFIN1                                             --------->ARR11(3)       ----------->RAV1(1)      ------                        --------->ZAT14      <---------ARR11(3)    --------->PCF2              ------   <-----------GT1      <---------ZAT14    <---------AHL20(2)<------------CBF                 ------- ---------DOF2          <---------ZAT18 <---------AHL20(1) --------->AHL20(2)             --------->MYB46(3) ----->ID1       <-----------GT1        --------->AHL20(2) <---------AHL20(2)     <---------GLK1(1) ------GT1     *TSS  <------------CBF   --------->AHL20(1) --------->AHL20(1)   <---------AtLEC2   ccttttaactgtttgatattatccattgcactctctgtttgatatattatctttaaagtaataaattgtgtcccacaggtttggatgtccgaacaaatgt  18194200                      <---------TOE2(3)                                            --------->ZAT6                      <---------YAB1                                              <---------YAB1                     <-----------GT1                                            --------->YAB1                   <---------YAB1                            ----------->GT1   <---------ATHB12 ----->GT1      <---------YAB1       <-----------GT1    <-----------GT1   ------>MYB46(1)          <- --->TOE2(3)    --------->ICU4    ----------->GT1  <---------GLK1(2)      ------>MYB83     <---------ARR11(3) ---->GT1   <---------GLK1(2)     --------->YAB1--------->YAB1       <-----------GT1       --------->ARR11(3)   taaaaaatcaaacagattattattaacattgcataatagtaactatctattcagaattttactaggtaaattgacctccctatcatcactagagttcttc  18194300                                                                                                  ---                                                                                                  <--                                                                                                  ---                          <---------At4g35610                    <---------ANAC58           ---------                       <---------At4g35610                       <---------ANAC58          <---------LBD16                    --------->LBD16                         ------>ZmHOX2a(1)             ------>ZmHOX2a(1)                    <---------At4g35610               <---------HSFC1(2)              <---------ARR14(2)                    --------->At4g35610               --------->HSFC1(2)              --------->ARR14(2)               <---------ANAC58                       <---------HSFB2a(1)            <---------GLK1(1)               <---------ANAC58                       --------->HSFB2a(1)            --------->GLK1(1)          <-----------RAV1(1)                        <---------KAN4(2)    --------->ARR14(2)<-------- --------MYB52(1)------>NtERF2           --------->YAB1    --------->TOE2(3)  --------->At4g35610 <--   ccttgggcttccatgttgcctccgctgcttctgcgagagagaaacatagtctgagaattttcctcaagcttgtccatatcagcgaaggtatcctctggaa  18194400                                                                                         <------NtERF2                            --------->TOE1(3)                                  ------->GAMYB         <---------YAB1     --------->TOE2(3)                                 <---------MYB55(2)   <---------ANAC46         <-----------TGA1                                  --------->MYB46(3) ------>ICU4    <---------ARR14(2)                                        ------>ZmHOX2a(1) -------ATHB51  --------->ARR11(3)                                       --------->TOE1(3)         <- ------>AHL20(2)<---------ARR11(3)                                       --------->TOE2(3)      <---- >HSFB2a(2)     --------->ARR14(2)                                     ------>ZmHOX2a(1) --------->LBD16 -HSFB2a(2)---------->DOF2 --------->ANAC46                           <---------ALFIN1  --------->RAP2.6(2) -------AHL20(2)<-----------ARR10                 ---------->ID1    ------>ZmHOX2a(1)  <---------RAP2.6(2)   ataattcgggtatgaaagtatcttcttcaacgtcaacatcgaactccatattgtcccattgctccatgtcctcctccttaaccaccatggccgcataagg  18194500                                          <----------DOF2                         --------->At4g35610                                       ------>ZmHOX2a(1)                          ----------->RAV1(2)                --------->ANAC58   <---------MYB52(1)                             <---------At4g35610     <-----------RAV1(2)          --------->LBD16           <---------ETT(2)    --------->REM1(1) -----ZmHOX2a(1)--------->ANAC58<---------LBD16<---------ANAC58                <-------TEIL --ZmHOX2a(1)<------ZmHOX2a(1)<-----------GT1  <---------ANAC58            ----------->GT1       <---   aggagaagcaggggaggaaggcaaatgggatttatccggtccttctttgtcttgggagactgtcgatgaggcagaagtagttacatctgagcatttggag  18194600  Previous    Next  AGI:  At5g45040.1    Description:  cytochrome c6 (ATC6). Identical to Cytochrome c6, chloroplast precursor (petJ) [Arabidopsis Thaliana] (GB:Q93VA3;GB:Q8SKV3;GB:Q9FL93); similar to electron transporter protein [Brassica rapa] (GB:ABK56012.1); contains InterPro domain Cytochrome c, monohaem; (InterPro:IPR009056); contains InterPro domain Cytochrome c, class I; (InterPro:IPR003088) Range:  from: 18192598    to: 18194115    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g45050.1    Description:  TTR1 (WRKY domain family protein 16); transcription factor. Identical to Probable WRKY transcription factor 16 (WRKY16) [Arabidopsis Thaliana] (GB:Q9FL92); similar to RRS1 (RESISTANT TO RALSTONIA SOLANACEARUM 1), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45260.1); similar to RRS1 (RESISTANT TO RALSTONIA SOLANACEARUM 1) [Arabidopsis thaliana] (TAIR:AT5G45260.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16320.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro Range:  from: 18194141    to: 18199032    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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