Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------RAP2.6(3)                                        ------>NtERF2                                       --------->RAP2.6(2)                                       --------->DEAR3(1)                                       --------->RAP2.3(3)                                       --------->ATERF1(2)                                       <---------ATERF1(2)                                       --------->ANAC46         --------->REM1(1)             --------->RAP2.3(2)                    ----------->GT1      --------->AtMYB61          --------->ARR14(2)                          --------->HSFB2a(2)   <---------ALFIN1        <---------ANAC58                                <------ZmHOX2a(2) <------ZmHOX2a(2)         <---------ANAC46                               --------->ARR14(2) -------->ARR14(2)         <---------ANAC58                               --------->AGP1            = ---------ARR14(2)       ------>NtERF2--------->RAP2.3(1)                 <---------ARR14(2)        < ---------ARR11(3)    --------->ZAT2 --------->At4g35610             -------->P         --------->TOE1(2) -------->AGP1        --------->At4g35610                           --------->WOX13(1)  --------->TOE2(2) -------->ARR11(3)    <---------ZAT2 <---------At4g35610          <---------ATHB12      --------->TOE2(3) >HSFB2a(2)           <---------At4g35610<------NtERF2      --------->ANAC58 <---------HSFB2a(2)   <- -HSFB2a(2) <---------ALFIN1     <---------ARR14(2)         --------->ANAC58----------->GT1        --   tagatccaccttcaccacttcgacagctgccttgggttctgccgccatagttacagatgtttaagcaaatcaaccagatcgagaaaaaaacctaagaaga  18185500                                     --------->MYB46(3)              --------->AHL20(2)    -------->P                  ---------->ID1      ------>MYB83                  ------>MYB46(1)       <----------DOF2      ------>MYB46(1)               ------>MYB83         <---------DAG2    <---------MYB111(2)            ------>MYB83         --------->HSFB2a(1)    <---------MYB46(2)             ------>MYB46(1)     ------->TEIL ===========================HOX2a_HOX2a             <---------MYB52(2) ------ZmHOX2a(2)               --------->ANAC46   --------------->AtSPL8                        <--- --------ARR11(3)             <-----------GT1     <-----------GT1                         ----------- ------->ARR11(3)    ------>ZmHOX2a(1)        <----------DOF2  <-----------GT1           ----------->GT1   agatcaccaaactcgattaattcctccaagttaaacccaaccagagctctttaaacgaacctttttttcgttttgggtctaacttgaagaaggggaaaat  18185600                      --------->ARR14(2)                      --------->GLK1(2)                      <---------ARR11(1)                      <---------ARR14(2)                     <---------CCA1(2)                     <---------GLK1(2)                     <---------ARR14(1)               ------->TEIL                -------->P                            <---------ARR14(2)                ------>MYB46(1)                       --------->ARR14(2)                ------>MYB83                          <---------ARR11(1)              ----------->HVH21                       --------->GLK1(2)              ------->GAMYB                          <---------ARR14(1)                         -----              --------->DEAR3(1)                     <---------GLK1(2)                    <---------AHL20(2)             --------->MYB46(3)            --------->GLK1(2)               --------->ARR14(2)   <----           --------->MYB52(1)              --------->ARR14(2)              <---------ARR14(2)  ------          --------->MYB46(3)               <---------ARR14(2)              --------->GLK1(2)   <----- *TSS     <---------ATHB12    <---------YAB1         <---------CCA1(2)  <---------MYB59--------->YAB1 --------GT1 --------->DEAR3(2)         <---------MYB59           <-------TEIL    ------------>CBF >GT1 ------------>CBF------->TEIL<-------TEIL<---------ETT(1)<---------YAB1  <---------ETT(1) ------   taccaatttccaataaccgacccgaatcttatatgattcataccgaatccgacccgaatcttatatgattcataccgaatccgacccaatattaaaaata  18185700     <---------TOE2(3)                                                --------->AtLEC2     <---------TOE1(3)                                           ----------->HVH21               <--- <------------CBF                                           <---------ARR14(2)                ------- ---->ARR14(2)                                              --------->ARR14(2)              <-------- -----ARR14(2)                                             ------>MYB83                   <---------- --->RVE1(1)                                               ------>MYB46(1)           --------->DAG2 ----GLK1(1)     --------->GLK1(2)                       <---------MYB59            ---------->DOF2 --->CCA1(1)---------->DOF2                           <---------WRKY18(1)  --------->MYB52(1) -------   tccgattgaggtttaaaagaagctgttttagaccggtccaatagtcgcattcgtcttgaccaaatccatgacatacaaaccggtccaaaagttgtcacgc  18185800              <---------At4g35610     --------->ANAC46<---------WRKY12   =====================RAV                                      <---------ZAT14   =======================RAV                                    --------->REM1(2)          ---------   ----------->RAV1(1)                                           --------->ZAT14   ------>ZmHOX2a(1)   <---------ALFIN1  <---------WRKY38(1)             ----------->HVH21   --------->ANAC58  <---------ARR14(2) -------DOF2  ----------->RAV1(2)                   <-----------HVH21    --------->ANAC58  <---------GLK1(2) -->ANAC58    --------->At4g35610                  <---------ANAC58    ---------->DOF2 <---------LBD16 ---GT1       --------->ZAT2                --------->ANAC58--------->ZAT14        <----------DOF2 -HVH21       <---------ZAT2<---------MYB52(1)     <---------ANAC58<----------ID1  <---------DAG2 -->ANAC58  <-----------RAV1(2)             --------->ANAC58<---------ZAT14 ---------->DOF2--------->ARR14(2)   tttccccacagaacccagctgagtcaactcgttagtctgagttaactcgctaggcgtgacagagcagtgaagacaaagcaaagtcctttttcggattcct  18185900                                                  <---------DAG2                                              --------->ZAT18                                         ---------->DOF2                 ----------->RAV1(1)                             <---------YAB1   <---------ZAT18    --------->TOE1(3)           --------                           <-----------GT1  <---------At4g35610  <---------DAG2              --------            --------->At4g35610    <-----------GT1<----------DOF2--------->TOE2(3)  ----------->RAV1(1)    --------->ZAT6      <---------ICU4 ------>ZmHOX2a(1)      <-----------GT1  ---------->DOF2------>NtERF2 <----------DOF2 <---------bZIP60(1)  --------->TOE2(3)    --------------------->WRI1        -------- >GLK1(1)*TSS    --------->bZIP60(1)  --------->TOE1(3)    <----------DOF2    --------->MYB52(1)   tctctttcactataagatgacatccctcattaccatttttccttaaagctcactttttcttctttaaccttatcgccacaaaacagcgacattcgacgcc  18186000  <---------ANAC55(2)  --------->ANAC55(2) <-------TEIL ->ANAC58                                             --------->YAB1 ->ANAC46                        <---------CCA1(2)  ------->TEIL ->ANAC58                   ---------->ID1     <---------AtLEC2                   <---------LBD16----   aaatacataacatcgtcgtcaacaggttttgtctcttatcttcttctctgcatgaatcatgttcttgttagacattttctgagttctgggtttgattttg  18186100                                                                 <----------DOF2                                                      --------->AHL20(2)                                                      <---------AHL20(1)                                                      <---------AHL20(2)                   ----------                                                 ------->TEIL   <---------DAG2             <---------ANAC55(2)       ------>ZmHOX2a(2)                      <---------YAB1    --------->TOE2(3)        --------->AHL20(2)    --------->YAB1        <---------YAB1    --------->YAB1   <-----------GT1             <---------AHL20(2)   <---------ATHB12     --------->YAB1      <---------ICU4  <-----------GT1<---------------AGL15<---- ------>ID1  <---------TOE2(3)             --------->ICU4  <---------AHL20(2)        --------->ICU4   gcccaatgatccataaatgttgaaaatcatatttgaaggctatgaattatgaacattttattttaacctttttctagctctaatgagataattaagtaaa  18186200                                                                                        ----------->HVH21                                                   ------>ZmHOX2a(1)                  <---------ANAC55(2)                                                   <----------DOF2                    --------->ANAC55(2)                   <---------DAG2                  =============================================bZIP_DOF         <---------HSFC1(2)                      ------>ZmHOX2a(2)                    <---------O2         --------->HSFB2a(1)               =============HOX2a_HOX2a                   ===============         --------->HSFC1(2)                ------>ZmHOX2a(1)                     ----------->HVH21     --------->ANAC46                    <---------ANAC58                      <---------ANAC55(2)    <---------HSFB2a(2)                  <---------ANAC58                      --------->ANAC55(2)    --------->HSFB2a(2)                  <---------ANAC46               <---------WOX13(1) ->GT1   <---------HSFB2a(1) <----------DOF2 ----------->HVH21       <---------YAB1   --------->O2 -- -------GT1        <----------DOF2     <---------ARR14(2)            <---------TOE2(3)--------->TGA1a   accctactcgaaatttctgaactttttgatgctttgattcgtttcctgtgatcctttacctagagaaaattgagattgattatgtgacaagtgaccatct  18186300                                                                                            <--------                                                <----------ID1                              ---------           ---------->DOF2                      ----------->GT1                    <---------ANAC58   --------->GLK1(1)                          ---------->DOF2                      <---------ANAC58   <---------GLK1(1)   <----------DOF2  ----------->GT1               --------->ICU4 <---------MYB52(1) =====================bZIP_DOF         <---------TOE2(3)   <---------ZAT18     <----------DOF2 ------->YAB1          <---------DAG2  <-----------------------TaNAC69(2)<---------YAB1 <-----------HVH21   ataagaaatctctcaaagttttcaactttactcactctattgaggtgaaaaagaaaaattgtgcattctgaaatttttattcttttcgtttgtcatgtga  18186400  Previous    Next  AGI:  At5g45010.1    Description:  ATDSS1(V) (ARABIDOPSIS DSS1 HOMOLOG ON CHROMOSOME V). Identical to Probable 26 proteasome complex subunit sem1-2 [Arabidopsis Thaliana] (GB:Q9FL96;GB:Q8LD17); similar to ATDSS1(I) [Arabidopsis thaliana] (TAIR:AT1G64750.2); similar to ATDSS1(I) [Arabidopsis thaliana] (TAIR:AT1G64750.1); contains InterPro domain DSS1/SEM1 (InterPro:IPR007834) Range:  from: 18184471    to: 18185601    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g45020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19880.1); similar to Intracellular chloride channel [Medicago truncatula] (GB:ABC75353.2); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like (InterPro:IPR010987); contains InterPro domain Glutathione S-transferase, C-terminal (InterPro:IPR004046); contains InterPro domain Glutathione S-transferase, predicted (InterPro:IPR016639) Range:  from: 18185909    to: 18187878    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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