Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------MYB59                                                  --------->At4g35610                                           --------->ARR14(2) ------>MYB46(1)                                           <---------ARR14(2) ------>MYB83                                          <---------MYB52(1)--------->MYB46(3)                                       <-------TEIL        --------->ANAC58                 --------->YAB1        ------>ZmHOX2a(2)   --------->ANAC58                <---------YAB1        <------ZmHOX2a(2)    --------->ANAC46              --------->YAB1         <---------ARR14(2)   -------->P                --------->YAB1              <---------ICU4         --------->ARR14(2) --------->MYB46(3)          --------->TOE2(3)           --------->REM1(1)         <---------GLK1(2)--------->AGP1              --------->ARR11(3)          <-------TEIL               --------->AGP1   <-----------ARR10           <---------ARR11(3)   tgagaccgtagcttcatcatcataaacatatatcaaacagatccgttttcgcatcagaactacccaacttcatacaatagagactatcttagtttgtata  18185200                                                 ------>MYB46(1)                                    -                                            --------->YAB1                                         --                                           --------->MYB46(3)                                      <-                                           <---------ATHB12                              <---------AHL20(2)                                         --------->WOX13(1)                             <---------AHL20(2)                                       <---------ATHB12                                 --------->AHL20(2)           --------->YAB1            ------>MYB46(1)  <---------At4g35610            <---------AHL20(2)    <---------ZAT18                  ------>MYB83------>MYB83                       --------->AHL20(2)    <---------ZAT14                <---------MYB59 <---------ATHB12                <---------MYB52(1)    --------->ZAT14                --------->TOE2(3)  --------->At4g35610  <---------CCA1(2) <-------   agacagtgcagaatcaaaatttgtatttataccaaaacctaatcaatcaccaaatcagttgctaatgaaatttgctcttatctccattaattttataacc  18185300                                                                                                    <                                                                                                    -                                                                                            <--------                                                                                            =========                                 ----------->GT1                                            ------>ZmHOX2a(1)     ------->TEIL               --------->YAB1                            <---------HSFB2a(2)       -  <---------YAB1               --------->ICU4                             --------->HSFB2a(2)       < -------->YAB1               --------->WOX13(1)                           =========================== ------->ICU4             --------->ANAC58                 <---------MYB52(1)           <---------SPL7 --------ATHB12           --------->ANAC58         <-----------GT1        ------>ZmHOX2a(1) --------- ----GT1             ---------->DOF2          --------->AHL20(2)         --------------------->WRI1 -   gatgatgaatcaatttcgaaaatcaaagaagcaattagtataaaacaaaaaaatcaccttcgttgatttcaaattcctcgaactcatcgtcgtcctcgaa  18185400                                        <---------RAP2.6(3)                                        ------>NtERF2                                       --------->ATERF1(2)                                       --------->RAP2.3(3)                                       --------->DEAR3(1)                                       <---------ATERF1(2)         --------->REM1(1)             --------->ANAC46      --------->AtMYB61                --------->RAP2.6(2)   <---------ALFIN1                    --------->RAP2.3(2)                    ----------->GT1 <------ZmHOX2a(2)               --------->ARR14(2)                          --------->HSFB2a(2) ---------ARR14(2)         <---------ANAC46                                <------ZmHOX2a(2) -------->ARR14(2)         <---------ANAC58                               --------->AGP1 -HSFB2a(2)                <---------ANAC58                               <---------ARR14(2)        < =======HOX2a_HOX2a      ------>NtERF2--------->RAP2.3(1)                 --------->ARR14(2)        = -------->ARR11(3)    --------->ZAT2 <---------At4g35610             -------->P         --------->TOE1(2) ---------ARR11(3)    <---------At4g35610                           --------->WOX13(1)  --------->TOE2(2) =======HOX2a_HOX2a   --------->At4g35610<------NtERF2            <---------ATHB12      --------->TOE2(3) >HSFB2a(2) <---------ALFIN1     <---------ARR14(2)         --------->ANAC58 <---------HSFB2a(2)   <- -------->AGP1        <---------ZAT2 --------->At4g35610    --------->ANAC58----------->GT1        --   tagatccaccttcaccacttcgacagctgccttgggttctgccgccatagttacagatgtttaagcaaatcaaccagatcgagaaaaaaacctaagaaga  18185500                                     --------->MYB46(3)              --------->AHL20(2)    ------>MYB46(1)             ---------->ID1      ------>MYB83                  ------>MYB83          <----------DOF2      ------>MYB46(1)               -------->P           <---------DAG2    <---------MYB111(2)            ------>MYB83         --------->HSFB2a(1)    <---------MYB46(2)             ------>MYB46(1)     ------->TEIL ------ZmHOX2a(2)               --------->ANAC46    <---------MYB52(2) ===========================HOX2a_HOX2a            --------------->AtSPL8                        <--- --------ARR11(3)             <-----------GT1     <-----------GT1                         ----------- ------->ARR11(3)    ------>ZmHOX2a(1)        <----------DOF2  <-----------GT1           ----------->GT1   agatcaccaaactcgattaattcctccaagttaaacccaaccagagctctttaaacgaacctttttttcgttttgggtctaacttgaagaaggggaaaat  18185600                      <---------ARR14(2)                      ------->TEIL                      <---------ARR11(1)                      --------->ARR14(2)                     <---------CCA1(2)                     <---------ARR14(1)                     <---------GLK1(2)                --------->ARR14(2)                ------>MYB46(1)                       <---------ARR14(2)                ------>MYB83                          <---------ARR11(1)                -------->P                            --------->GLK1(2)              ----------->HVH21                       ------->TEIL              ------->GAMYB                          <---------CCA1(2)                          -----              --------->DEAR3(1)                     <---------ARR14(1)                   <---------AHL20(2)             --------->DEAR3(2)            --------->ARR14(2)              --------->GLK1(2)    <----           --------->MYB52(1)              <---------ARR14(2)              --------->ARR14(2)  ------          --------->MYB46(3)               --------->GLK1(2)               <---------ARR14(2)  <----- *TSS     <---------ATHB12    <---------YAB1         <---------GLK1(2)  <---------MYB59--------->YAB1 --------GT1 --------->MYB46(3)   <-------TEIL<---------ETT(1)    <-------TEIL    ------------>CBF >GT1 ------------>CBF--------->GLK1(2) <---------MYB59       <---------YAB1  <---------ETT(1) ------   taccaatttccaataaccgacccgaatcttatatgattcataccgaatccgacccgaatcttatatgattcataccgaatccgacccaatattaaaaata  18185700     <---------TOE2(3)                                                --------->AtLEC2     <---------TOE1(3)                                           ----------->HVH21               <--- <------------CBF                                           <---------ARR14(2)                ------- ---->ARR14(2)                                              --------->ARR14(2)              <-------- -----ARR14(2)                                             ------>MYB46(1)                <---------- --->CCA1(1)                                               ------>MYB83              --------->DAG2 ----GLK1(1)     --------->GLK1(2)                       <---------MYB59            ---------->DOF2 --->RVE1(1)---------->DOF2                           <---------WRKY18(1)  --------->MYB52(1) -------   tccgattgaggtttaaaagaagctgttttagaccggtccaatagtcgcattcgtcttgaccaaatccatgacatacaaaccggtccaaaagttgtcacgc  18185800              ----------->RAV1(2)     --------->ANAC46<---------WRKY12   =======================RAV                                    --------->ZAT14   <---------ALFIN1  <---------WRKY38(1)                         --------->REM1(2)          ---------   ----------->RAV1(1)                                           <---------ZAT14   ------>ZmHOX2a(1)   =====================RAV                          ----------->HVH21   --------->ANAC58  <---------GLK1(2) -------DOF2  <---------At4g35610                   <-----------HVH21    --------->ANAC58  <---------ARR14(2) -->ANAC58    --------->At4g35610                  <---------ANAC58    ---------->DOF2 <---------LBD16 ---GT1       <---------ZAT2                --------->ANAC58<---------ZAT14        <---------DAG2 -HVH21       --------->ZAT2<---------MYB52(1)     <---------ANAC58<----------ID1  <----------DOF2 -->ANAC58  <-----------RAV1(2)             --------->ANAC58--------->ZAT14 ---------->DOF2--------->ARR14(2)   tttccccacagaacccagctgagtcaactcgttagtctgagttaactcgctaggcgtgacagagcagtgaagacaaagcaaagtcctttttcggattcct  18185900                                                  <---------DAG2                                              --------->ZAT18                                         ---------->DOF2                 ----------->RAV1(1)                             <---------YAB1   <---------ZAT18    --------->TOE2(3)           --------                           <-----------GT1  <---------At4g35610  --------->TOE1(3)           --------            --------->At4g35610    <-----------GT1<----------DOF2<---------DAG2     ----------->RAV1(1)    --------->ZAT6      <---------ICU4 ------>ZmHOX2a(1)      <-----------GT1  ---------->DOF2------>NtERF2 <----------DOF2 <---------bZIP60(1)  --------->TOE2(3)    --------------------->WRI1        -------- >GLK1(1)*TSS    --------->bZIP60(1)  --------->TOE1(3)    <----------DOF2    --------->MYB52(1)   tctctttcactataagatgacatccctcattaccatttttccttaaagctcactttttcttctttaaccttatcgccacaaaacagcgacattcgacgcc  18186000  <---------ANAC55(2)  --------->ANAC55(2) <-------TEIL ->ANAC46                                             --------->YAB1 ->ANAC58                        <---------CCA1(2)  ------->TEIL ->ANAC58                   ---------->ID1     <---------AtLEC2                   <---------LBD16----   aaatacataacatcgtcgtcaacaggttttgtctcttatcttcttctctgcatgaatcatgttcttgttagacattttctgagttctgggtttgattttg  18186100  Previous    Next  AGI:  At5g45010.1    Description:  ATDSS1(V) (ARABIDOPSIS DSS1 HOMOLOG ON CHROMOSOME V). Identical to Probable 26 proteasome complex subunit sem1-2 [Arabidopsis Thaliana] (GB:Q9FL96;GB:Q8LD17); similar to ATDSS1(I) [Arabidopsis thaliana] (TAIR:AT1G64750.2); similar to ATDSS1(I) [Arabidopsis thaliana] (TAIR:AT1G64750.1); contains InterPro domain DSS1/SEM1 (InterPro:IPR007834) Range:  from: 18184471    to: 18185601    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g45020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19880.1); similar to Intracellular chloride channel [Medicago truncatula] (GB:ABC75353.2); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like (InterPro:IPR010987); contains InterPro domain Glutathione S-transferase, C-terminal (InterPro:IPR004046); contains InterPro domain Glutathione S-transferase, predicted (InterPro:IPR016639) Range:  from: 18185909    to: 18187878    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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