Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->ANAC58                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                              <---------ALFIN1                                                                           --------->ANAC46                                                                         --------->ANAC58                                                                         --------->ANAC55(2)                                                                         --------->ANAC46                                                                         --------->ANAC55(1)                                                                         <---------ANAC55(2)                                                     <------NtERF2       --------->ANAC58                                                    --------->LBD16   <---------ARR14(2)                                                   <---------RAP2.6(2)--------->ARR14(2)                                                  <---------LBD16    --------->DOF5.7(2)      -------        <---------ANAC55(2)                    <---------ANAC58      <---------MYB52(1)    --------->YAB1 >YAB1  --------->ANAC55(2)       <------NtERF2<---------ANAC58    <---------ANAC46 ----------->HVH21   tgttgtcaatacataatttagtttgggcaatcgggcagagtttggccttgtttgcggcatacacattttccgtttacgcaacacgcccgacgataatcag  18175000                --------->ANAC58                --------->ANAC58              <---------ALFIN1              <---------ATHB12             --------->ZAT14                <---------YAB1            <---------ALFIN1       <---------ARR14(2)                                        <-------         --------->ANAC46          --------->ARR14(2)                                        <-------      ------>MYB83                --------->GLK1(1)                                         <--------      -------->P--------->ANAC46  <---------GLK1(1)                                         ---------      ------>MYB46(1)             <---------CCA1(2)                                        ---------- --------->ANAC58               <---------ANAC55(2)                 <-----------GT1        --------->WRKY12 --------->ANAC58               --------->ANAC55(2)         <----------DOF2              --------->TOE2(3) -->YAB1------->GAMYB       <-----------HVH21           <---------GLK1(2)              <---------YAB1   aacatgccaaccctccacactcaaggtatgtgtcacatatccctccatgattcacatcgattctttttatattcccttcttctaaatttatccttgacgg  18175100      --------->ARR11(3)      <---------ARR11(3)                                                                --------->ATHB12  <------ZmHOX2a(1)                  ------>ZmHOX2a(1)                                  --------->YAB1 ----------AGL1                      ================================HOX2a_HOX2a        <--------ATHB1 ----------AG              <----------DOF2          <---------ZAT18                     <---------ICU4 -WRKY18(1)      <---------MYB46(3) --------->TOE2(3)                                  <---------YAB1 >MYB52(1)    ----------->TGA1      --------->TOE1(3)         ------>ZmHOX2a(2)        <---------ATHB12 ->HVH21    --------->At4g35610---------->ID1       --------->ZAT14  <---------AHL20(2)--------->ICU4   attaggaagacatttgctgtcgttacattctttgtcttccttagcctcgattagtttactctgatctgtagtttatttcaagaaaaacaatgatttcaaa  18175200                                               <---------YAB1                                               <---------AHL20(2)                                              --------->AHL20(2)                                              --------->AHL20(1)                                    -                                      --------->ARR14(2)                                            -                                      <---------ARR14(2)                                           --                                   <---------ANAC46                                                <-                                   <---------ANAC58                      --------->AHL20(2)      ----                        --------->ATHB12      <---------AHL20(1)        --------->AHL20(2)  <--------  --------->ARR14(2)--------->DAG2 <---------ANAC58          <---------GLK1(2) ---------->DOF2-------   ttagtattctctatgttttcaaaaattgatttaagtagcgtatacgaatataatggaaacatagattatgcaaaataaaaaaaaagcttgagtttaacca  18175300                                                                                                  <--                                                                                                  <--          <---------YAB1                                                                         <--- -------->REM1(1)                                                                                ---- -------->ANAC46                                                                                <---- ------->ZAT14         --------->YAB1                                                        <------- --------ZAT14        <---------ATHB12                                                --------->AHL20(2) ----->ANAC46<---------GLK1(1)                         --------->At5g28300       <---------RAP2.6(3) ---GT1<---------AHL20(2)           <---------AHL20(2)----------->GT1           --------->RAP2.6(2)<- -->MYB46(3) --------->GLK1(1)      <-----------GT1<------ZmHOX2a(1)       ---------->DOF2 ----------   ctacaccattttatgaattcccaaatcaaaattcaaatttacttacaagagaaggacagtaacaagagggagagaagaaaagccgtcttaaaataaaggt  18175400                                            <---------ANAC46                                          <---------ANAC46 ----MYB83                             <---------MYB46(3)                     ----------->TBP ----MYB46(1)                         <---------WOX13(1)                    <---------AHL20(2) ------AtMYB61                        <---------YAB1                <---------ANAC58 ----->MYB59                         <------------CBF               <---------ANAC58 ----P   ------------>CBF           --------->ATHB12     <---------AHL20(2) --------->AHL20(2)     -- --TOE2(3)  <------------CBF       <---------YAB1       --------->AHL20(2)  <-----------TBP        <- ----------HVH21                <---------MYB46(3)      <-----------TBP<-------TEIL               <-- >DOF2  --------->MYB52(1)  <-----------RAV1(1)---------->DOF2      <---------ANAC46     ---------->DOF2   tggtcatagctaacaattgtctgtatttgaatgttggatgattgttgtgtaaagagaattttatagccttgcgttcatttatatatgggatgaaagaaca  18175500                                                                        <----------DOF2                                                                        <---------DAG2                                                                   --------->MYB46(3)                                                                <----------ID1                                  --------------->AtSPL8        <------ZmHOX2a(1)        <-----------GT1           <---------------AtSPL8    --------->ARR14(2)            <---------ICU4 ------->ARR14(2)          --------->AHL20(2)               <---------ARR14(2)  <----------DOF2     - --------ARR14(2)        <----------DOF2   --------->YAB1------>ZmHOX2a(2)   <-----------GT1<-------- ----ZmHOX2a(1)          --------->TOE2(3)<---------YAB1 ==============HOX2a_HOX2a       <---------MYB52(1)   ggatttgttttttctatacaactggaactttaaattttagtactataattctacatagatcggataggaacaaactttttttctttcttcagttatgact  18175600              ---------->DOF2                  <---------AHL20(2)            <---------YAB1               ----------->GT1          --------->CCA1(2)              --------->YAB1         --------->ARR14(2)             <---------TOE2(3)         --------->ARR11(3)             <---------YAB1         --------->ARR11(1)           --------->YAB1       --------->AHL20(2)         <---------ARR14(2)           <---------ICU4       <---------AHL20(2)                    <---     --------->YAB1                  --------->ICU4       <---------AHL20(2)          <----------DOF2    <---------ATHB12                 <---------ATHB51     --------->AHL20(2)    <-----------GT1 -----  --------->WOX13(1)             ------------>CBF         <---------AHL20(1)<----------DOF2     <---- ----------->CBF                 <-----------------AG------------>CBF       ------>ZmHOX2a(1)  ------ -YAB1   <---------ARR11(3)--------->LBD16     <---------ICU4            ---------->ID1        ------   aattcaatcaagatatgaaagtctatttccccaaaaacaattatggtaataaatccacaatttaatttgggatttgtcctttctactacttttgaaaata  18175700       <---------ARR11(1)                                                                           < ------YAB1                                                                               <---------ARR11(3) ---->ARR11(3)                                                                <---------DAG2  <------ -----ARR11(3)                                    --------->YAB1   --------->YAB1       ----------->ARR10 --->CCA1(1)                        ----------->GT1         <----------DOF2   <----------DOF2<------- --->RVE1(1)     <---------YAB1  --------->At4g35610     <-----------GT1   <-----------GT1--------->ARR11(3)   tcatttccaaatctatattttgattccatatagtgagatggaaaaacagttttcatattttactttctatgaaaatttaactttatagattagattttat  18175800                                                               <---------RVE1(1)                                                               <---------CCA1(1)                                                              --------->ARR11(3)                                                   <---------ICU4                                                   <--------ATHB1                              ------->TEIL         -------->HAHB4                        --------->ARR11(1)         --------->ATHB51        --------->TOE2(3)--------->CCA1(2)        <---------AHL20(2)          =======================      ------->TEIL      <---------ARR11(3)        <---------ATHB51            <-----------------AGL3     <-----------GT1    --------->ARR11(3)        <---------YAB1            <-----------GT1  --------------->AtSPL8--------->ARR14(2)        --------->ICU4--------->ARR14(2)             <----- ---------MYB52(1)      <---------ARR14(2)        --------->AHL20(2)    <----------DOF2     <-------- -----GT1        --------->ARR14(2)             --------->YAB1<---------ARR11(3) <---------YAB1------ --AHL20(2)      <---------ARR14(2)           --------->AHL20(2)<---------ARR14(2)        --------->ICU4   cagttatgaacctcattcgaatccaagatatgaacgtctatttcccaaaaaaataattgtttgggatatttgcgctttctactatttttgaaaagattat  18175900  Previous    Next  AGI:  At5g44973.1    Description:  contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 18174869    to: 18175407    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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