Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                    --------->ALFIN1                                                  <---------bZIP60(2)                  >>>>>>>>>>>>>>>>>LFY            <---------ANAC46                 --------->ANAC58                 --------->ANAC55(2)                 --------->ANAC58                 <---------ANAC58               --------->At4g35610                <---------ANAC55(2)               <---------At4g35610                <---------ANAC58            <---------At4g35610                   <---------TGA1a            --------->At4g35610                  <-------TEIL           ----------->RAV1(1)                   --------->SPL7           ------>NtERF2                         <-----------------------TaNAC69(2)          <---------DEAR3(1)                  <---------ANAC58          <---------RAP2.3(2)                <---------MYB46(3)          <---------RAP2.3(3)                --------->MYB59          <---------ATERF1(2)            --------->ATHB12          <---------RAP2.6(2)           <---------YAB1<------NtERF2          --------->ATERF1(2)           ------>ZmHOX2a(1)         --------->RAP2.6(3)          <-----------------AG                                        <--       --------->DAG2                 ----------------->AGL1                                     <---      ---------->DOF2                 <-----------------AGL1                                     <---     ---------->DOF2         --------->REM1(1)<---------ANAC58                                   <--- -------GT1<---------RAP2.3(1)        ----------->RAV1(2)              --------->LBD16      --------- ---AHL20(2)<------NtERF2 --------->ETT(2) <---------WOX13(1)         <---------ANAC46      <--------   tctatccaaaaggcggcagaagccattgtctacatcggcctcctgattgggtacgtggcgaatgtagactctccgtgtttttggtttagagactgtgttg  18166200       --------->WRKY12                                                  <---------GLK1(1)       --------->WRKY38(1)                                               --------->GLK1(1)   <---------YAB1                                                  ---------->DOF2 --------DOF2                --------->ZAT2                    ----------->GT1 ------ANAC46                <---------ZAT2                   --------->DAG2           <-----------GT1 ------ANAC58           --------->ZAT14                 ============================================= ------ANAC58           <---------ZAT14                 --------------->AGL15      --------->ARR11(3) >ALFIN1           ------>ZmHOX2a(1)          <---------DAG2 ---------->DOF2       <---------GLK1(2) ---RAV1(1)       --------->TOE2(3) <---------DEAR3(1)  <---------------AGL15      <---------ARR11(3)   ctttcaccattgactcccttccttacttcacagttgggactgcgataaccttttcaaacccaaaaaagtaaaaggaattcatagagatttttctatagtt  18166300                                                              ---------->DOF2                                                          ---------->DOF2                     <------ZmHOX2a(2)                                                      ----------->GT1                        <-------                                               <---------------AGL15                    ------->TEIL                                               --------------->AGL15                 --------->ANAC58                                              <-----------------AG                   --------->ANAC58                                  <---------AHL20(2)--------->DAG2                   <---------MYB52(2)                              <---------AHL20(2)   ---------->DOF2               <-----------HVH21                   <---------TOE2(3)          ----------------->AG              <---------bZIP60(1)                   <---------TOE1(3)   ---------->ID1--------->DAG2             --------->bZIP60(1) <           <------------CBF  <---------YAB1   <-----------------AGL1          =======================HOX2a_HOX2a          <---------AHL20(2)<---------AHL20(2)----------------->AGL2          <------ZmHOX2a(1)    --         <---------YAB1   <---------YAB1      ----------------->AGL1        <---------TOE2(2)-------- ==============================================================MADS_MADS    <---------TOE1(2)--------   ttatggacatatttattgtttaaggtttatttttattttttggcccaaacccaaaaaggtaaaagaaagaaaccctcgtaggatgtcacgaacccgatct  18166400                                          --------->ARR14(2)                                          <---------ARR11(3)     <---------ARR11(3)                   --------->ARR11(3)                           --------->MYB52(2)     --------->ARR11(3)                  <---------GLK1(1) --------->ZAT14           <---------MYB52(1)    <---------ICU4                       --------->GLK1(1) <---------ZAT14           <--------P    -------->HAHB4                 <---------DEAR3(1)      --------->At4g35610      --------->At5g28300    --------->YAB1                <---------MYB52(1)   --------->ARR14(2)          ----------->GT1   --------->ICU4                <-------GAMYB         <---------ARR14(2)          <---------MYB46(3)  <---------TOE2(3)             <---------MYB46(3)     --------->GLK1(2)        ------------>AtMYB77 --ARR14(2)                    <------NtERF2        <------NtERF2               ------------>MYB.PH3(1) ---------AHL20(2)           <---------ANAC46       ------------>CBF       <---------LBD16 ------->AHL20(2)            <---------ANAC58      ------>NtERF2          --------->MYB52(1)  <------ ->ARR14(2)           --------->ZAT6 <------NtERF2 ----------->RAV1(1)   ----------->HVH21   <------- ->AGP1  --------->At4g35610 <---------ANAC58  <---------DEAR3(1)   ------------>CBF<-------GAMYB   <   atttaatgatcatctctctaaataacacttggcgtcgttggcgatatcttcggcgacaatctgcagtcaaaacaatcgacggagacggttagttcatcat  18166500                           ------>ZmHOX2a(2)                           ==============================HOX2a_HOX2a     <-----------RAV1(1)      <--                ==================HOX2a_HOX2a                        <---------ANAC46        --------    <---------TOE1(2)  <---------YAB1                                <---------ANAC58 =============== ---ICU4        <------ZmHOX2a(1)                 <------ZmHOX2a(1)  <---------ANAC58 ------>ZmHOX2a(2) --YAB1     --------------------->WRI1          --------->MYB59    <<<<<<<<<<WRKY63 --------->ARR11(3) ---------YAB1<---------TOE2(3)<----------DOF2--------->ICU4   <---------MYB46(3)   <---------ARR11(3)   ttatccttggattacttaggaagttttgatcgactttgaaacatagaaattaggaatcgatgttgttgttgacttgtgttgttcatgatctagggatgga  18166600                                 <---------At4g35610                                 --------->At4g35610                              <---------ANAC58                              <---------ANAC58                          <---------GLK1(2)                        --------->LBD16                             --------->ARR11(3)                       --------->HSFB2a(2)               ------>MYB83--------->GLK1(2)       --------->YAB1 <---------LBD16      <---------GLK1(2)        <---------GLK1(2)      <---------HSFB2a(2)       --------->AHL20(2) --------->ARR14(2)             ------>MYB46(1)  <---------MYB52(1)      --- ----ZmHOX2a(1)     <---------ARR14(2)     --------->ARR14(2)     <---------ATHB12  <---------ANAC58 ->ALFIN1           --------->ARR14(2)     <---------ARR14(2)  --------->AtMYB61    <---------ANAC46 ====HOX2a_HOX2a   <---------GLK1(1)     ----------->ARR10 <---------ETT(1)         <---------ANAC58   ggagttcgattatatcagtgaatttccggattgtttgctaactcagatactcttaaaccttccgaccaaagattctgttaagacaagcgtgttatcgaag  18166700                                               --------->WRKY12             ----------->GT1           <---------ANAC55(2)             ------>ZmHOX2a(1)             <---------MYB46(3)        --------->ANAC55(2)            --------->TOE2(3)       <---------ARR11(3)              --------->ANAC46               <---------------AGL15       --------->ARR11(3)              --------->ANAC58               --------------->AGL15      --------->GLK1(1)   --------->LBD16 ------->TEIL               ----------------->AGL3      <---------GLK1(1)   ------>ZmHOX2a(1)  <----------DOF2         ----------------->AG ----------->GT1         <---------LBD16 <---------ALFIN1          --------->ARR14(2) ------>CCA1(2)   <-----------GT1      --------->ANAC58            <---------ARR14(2)   <---------MYB52(1)   agatggagaaatctttggttaaacgttcctggacttcgattacgcacctttgacttcccagtcttcccctatccttatgaagaaggcttcgtaaggttta  18166800                                     ---------->DOF2                               ----------->RAV1(2)                             --------->ANAC58                             --------->ANAC58                             --------->O2                             --------->TGA1a                             --------->ANAC46                          ----------->HVH21        <---------ANAC55(2)                         <-----------HVH21         --------->ANAC55(2)                        --------->ANAC58          <---------TOE2(3)                        --------->ANAC58      <---------ICU4                        <---------At4g35610   --------->YAB1                        --------->At4g35610  <---------YAB1                        --------->ANAC46  <-------TEIL------->TEIL             <------ZmHOX2a(2)    <            <---------ANAC46 ===================bZIP_DOF            --------->YAB1               ----   tggacagatttatggagtttaagtgcaggtcacgcctgcaaaagttcatgataacgtatttcgaacacaatggttatcgagatcgattaatggagttgat  18166900        <--------P        <---------WOX13(1)      <---------MYB46(3) <---------ZAT14                                                       --------->TOE2(3) --------->ZAT14                                                      --------->ANAC46 <-------TEIL------>ZmHOX2a(2)                                        --------->ANAC58 <<<<<<<<<<<<<<<<LFY                                                  --------->ANAC58 -->ZmHOX2a(2)                                                       --------->SPL7           -------   cggtacactggttgatcgtggaattcaacatttgtatgtttatatgcatacttgtaacagagttgatttcatacgtcaaaacatttacaagagtaagaca  18167000                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                                                                     <---------ARR14(3)                                                                     --------->ARR11(3)                                  --------->GLK1(2)                  <---------ARR14(2)       <------                                  <---------ARR14(2)                 <---------ARR11(3)       <------                                  --------->ARR14(2)                 --------->AGP1    --------->ARR11(3)                         <---------ZAT6       ---------->ID1         <---------AGP1    <---------AHL20(1)                         ----------->GT1     <-------GAMYB<---------ANAC58           --------->GLK1(2)                   <---------TOE2(3)        --------->MYB52(2)       --------->ARR14(3)--------->AHL20(1)     <----------DOF2<---------ANAC46  --------->LBD16     <---------ANAC58      ----------->GT1   --- -->ARR11(3) <----------DOF2 ---------->DOF2<---------MYB46(3)       --------->ARR14(2)<---------ARR11(3)   ttggtctctttgaagctttataacgtagagttaaagaatccagagtttgttgtttctctaccttgtctcaagatcttgaaactggagaatatttttcacg  18167100  Previous    Next  AGI:  At5g44940.1    Description:  F-box family protein. Identical to Putative F-box protein At5g44940 [Arabidopsis Thaliana] (GB:Q9FLA3); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G44960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 18166596    to: 18168119    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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