Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------WRKY18(1)                                                         --------->WRKY12                                                         --------->WRKY38(1)                                                         ----------->HVH21                                                         --------->WRKY45                           ---------->DOF2              <---------MYB52(1)          --------->ZAT2                   --------->ANAC58                    <-------GAMYB  --------->WRKY12          -----      --------->ATHB12---------->DOF2              <---------ALFIN1   --------->WRKY38(1)       -----     <---------YAB1--------->ANAC58     --------->At4g35610    <---------ANAC46     <---------ZAT2 -- -------DOF2   --------->ANAC58      --------->At4g35610--------->DOF5.7(2)         <---------At4g35610 -----ANAC58   --------->ANAC58---------->DOF2  <---------WRKY38(1) --------->REM1(2)         ------- -----ANAC58   ------------------------>ANAC81  <---------WRKY12    <-------GAMYB   --------->At4g35610   ttttgatacgattggagaagcaagtaaagaaaagaaagaagcagaggcagtcaacaccgttgactgtgtgtgttgactgtgtgatgagctgggaaggaaa  18155600                             <-------GAMYB                                                    <------                            <---------MYB46(3)                                               <-------                           <---------ANAC58                                <-----------ARR10<--------                           <---------RAP2.6(2)                             --------->GLK1(2)<-------- ---->ANAC58              <---------LBD16                    --------->GLK1(1)            <---------YAB1 ---->ANAC58 ----------->HVH21       <---------ANAC58       <---------ARR11(3)        <---------YAB1 -------->DOF2   ---------->DOF2     <---------ANAC58       --------->ARR11(3)     <---------YAB1<--- --->DOF2  <---------AtLEC2<---------ANAC58            <------ZmHOX2a(1)  <---------GLK1(2)--------->ATHB12   gcaaagtctctgggcatgacaaagggtttgcggttgcaggcttgggagtataaataaggagagatatcgatttagagaatctatgcttattgttgattgt  18155700                                                                                 --------->WRKY12                                                                                 ----------->HVH21       <---------ANAC46                                                        <---------ZAT2       <---------ANAC58                                                        --------->ZAT2       <---------ANAC58                                                        --------->At4g35610 ---MYB46(3)                                                                   <---------At4g35610 --WOX13(1)                                                           --------->ZAT18 -ANAC58          <---------ANAC58             <---------bZIP60(2)    <---------ZAT14 -ANAC58          <---------AtLEC2             <---------ANAC46       --------->ZAT14       <-------- ------MYB46(3)   <---------ANAC58     <---------At4g35610          <---------------AtSPL8  <--------   tgttgaattgtgtgagtcttgcatgagagacttgagagttgagctagtgatgtgctagtctctctcatatggtgtactgagagctgacctagtgatgtgc  18155800                           <---------ZAT14  <------ZmHOX2a(1)                           --------->ZAT14<---------TOE2(3)                           --------->ZAT18<---------TOE1(3)                  --------->ALFIN1   <------MYB83  <---------TOE2(2)                <---------ANAC58     <------MYB46(1)                                   <---------MYB52(1)       <---------ANAC46 <---------ANAC46  --------->ANAC55(2)                    --------->ZAT18 -ANAC46        <---------ANAC58    <---------AtMYB61   <-----------------AGL1   <---------ZAT14 -bZIP60(2)     <---------ANAC46    --------->MYB59<---------TOE1(2)    --------->MYB52(1)   tagtctctctcgtgtatggtgtgttagtgtgtactggtttggttaaggaatcggaggtatcgatattggaaacttaacagttttgcactgtttggctata  18155900                                                                         =========================HOX2a_HOX2a                                                                         ========================HOX2a_HOX2a                                                                         <------ZmHOX2a(1)                                                                       --------->LBD16             --                                                                       <---------TOE1(2)     <-------                                                          --------->ANAC46                 <-------TEIL                                                          ----------->HVH21                ------>ZmHOX2a(2)                                                         --------->MYB46(3)        <---------ARR14(2)                          <----------DOF2              -------->P      <---------TOE2(2)  <------ZmHOX2a(2)                        <---------------AGL15     --------->AHL20(2)  <---------LBD16    --------->ARR14(2)                        --------------->AGL15   --------->TOE2(3)----------->HVH21 --------->ARR14(2)                     <-----------GT1 ---------->ID1   <-----------GT1 <-----------RAV1(2)<---------ARR14(2)   gattacatctctgtttagttgtttcactctttatagtttgtcttcaaaaacattatttacccgacccatgacccaggatttagagtatttggatccattg  18156000              --------->YAB1                  <---------O2         ----------->GT1                   --------->DEAR3(1)     <---------TOE2(3)  ---------->DOF2   <------NtERF2    <---------ICU4   <---------TOE2(3)    --------->ATERF1(1)      <------MYB83    --------->YAB1<---------YAB1         --------->At4g35610     <---------WOX13(1)  --------->GLK1(2)   <---------ATHB51 ---------->DOF2--------->ARR14(2)          --------->ATHB12 ---------->DOF2  *TSS<-----------RAV1(1)          <---------ARR14(2)         <---------ATHB12 --------->AHL20(2) ---------->CBF<---------AHL20(2) <------ZmHOX2a(1)       --------->MYB46(3)   <---------AHL20(2) -----CBF<---------ANAC46       <---------TOE2(3)    <------NtERF2 <------MYB46(1)  <---------GLK1(2)   agacaataatgttgtataatattaaagaaagactgaggataggcgcagacttggcatcgagccactgattggtctgaagaattaaagaatcgtttctctg  18156100            <------ZmHOX2a(1)           <----------ID1                 ------>MYB46(1)        ---------->DOF2                   ------>MYB83                           --------->AtMYB61      <---------AHL20(2)    ---------->DOF2       <-----------GT1      ------->TEIL      <---------ATHB12   ------->TEIL---------->DOF2          --------->MYB46(3) <---------AHL20(2) --------->ANAC46   taatgtattttaaaggacaaagtgagacaacaaagtctctcaccaactatattcactattttttattcagacgaacctagacaccattccaatggatgag  18156200                                                        --------->ANAC58                                                      <---------ANAC46                                                     <---------LBD16                                                  --------->ZAT2                                                  --------->At4g35610                                                  <---------At4g35610                                                  <---------ZAT2            --------->HSFB2a(2)             <----------DOF2                 --------->At4g35610     --------->WOX13(1)        ------        ------->TEIL <-----------RAV1(2)   <------ZmHOX2a(1)<---------ARR11(3)  <---------At4g35610       --------->ARR14(2)               <---------LBD16 --------->ANAC58    <---------HSFB2a(2)------       <---------ARR14(2)               <---------HSFB2a(2) --------->ARR11(3)  --------->At4g35610       <---------GLK1(2)                --------->LBD16 --------->ANAC46------->GAMYB  --------->ICU4       <---------ARR11(3)              <---------ANAC46--------->LBD16 --------->MYB46(3) <---------TOE2(3)   caggtccaagaacctctttctgatcaggtgtttatcaacttccgaggagatgagctgcgcgaaatctttgtcaaccatctagagctgcaattaagaaacg  18156300                                                                  <------ZmHOX2a(2)                                                                 --------->ARR11(3)                                       --------->At4g35610    --------->ANAC58   <------ZmHOX2a(2)            ---------->DOF2    <---------ARR11(3)                             <-- --->ANAC58                 --------->At4g35610    --------->ARR11(3)   ----------->GT1           --- --->ANAC58            ---------->DOF2 <---------At4g35610    --------->ANAC58                    <--   cagggatcaacgtcttcatagacactaaagagcagaaagggagaagactacaatatctcttcacaaggatcaagaagtcaaaaatcgcgcttgctatctt  18156400                                                                                                    -                                                                                                    -                                                                                                   --                                     <---------ANAC58                 <---------GLK1(2)            <-          <---------ZAT6  <---------MYB46(3)   <---------YAB1     ---------->DOF2                 <-- -------HSFB2a(2)        <---------ANAC46----------->TGA1     <---------TOE2(3)               ------- ------>HSFB2a(2) ---------->DOF2    <---------ANAC58    --------->At4g35610                  <------ -------------AGL15   --------->ALFIN1   ----------->HVH21 <---------REM1(1)             <---------ATHB12   ctccaagaggtactgtgagtcaaagtggtgtttggatgagcttgtgacgatgaatgaacagatgaaggaaaagaaactcgtggtgattccaatcttctat  18156500  Previous    Next  AGI:  At5g44920.1    Description:  Toll-Interleukin-Resistance (TIR) domain-containing protein. similar to disease resistance protein (TIR class), putative [Arabidopsis thaliana] (TAIR:AT4G19920.1); similar to unknown [Arabidopsis lyrata] (GB:AAO42473.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 18156002    to: 18157417    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g44930.1    Description:  ARAD2 (ARABINAN DEFICIENT 2); catalytic. similar to ARAD1 (ARABINAN DEFICIENT 1), catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G35100.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68074.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) Range:  from: 18156002    to: 18159374    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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