Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->AHL20(2)                                  <---------AHL20(2)                               <---------AHL20(2)                              <---------AHL20(2)                          <---------AHL20(2)                 --------->AHL20(2)--------->AHL20(1) <---------AHL20(2)    ----------->GT1                                        --------->ARR11(3) ---------AHL20(2)--------->AHL20(2)                        <---------At5g28300<---------YAB1 -------->AHL20(2)<---------AHL20(2)  <---------AHL20(2)   <-----------GT1    <---------ARR11(3) ----->YAB1      <---------AHL20(2)<---------AHL20(1) <---------YAB1         --------->YAB1     <---- ->GT1     <---------AHL20(2) --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   --------->YAB1   aataaaattggatttaaaatttttttagtaaattaaatattttaaaaatagggattatcatttactgtttagaattcaaatatcatcgataaaaatttat  18131500                            xxxxxxxxxxxxxxxx>smallRNA(s)                       <---------HSFB2a(2)    <---------AHL20(1)                       --------->HSFB2a(2)    --------->AHL20(1)                       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                         <---------YAB1                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  <---------AHL20(1)                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   --------->AHL20(2)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    --------->AHL20(1) <-----                   <---------CCA1(2)         --------->AHL20(2)             <---------ARR11(3) ------                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   --------->WRKY18(1)  ---------                --------->LBD16        ----------->GT1         <---------YAB1 --------->AHL20(1)                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------ICU4            <---------ARR14(2)       --------->TOE1(2)         <---------ATHB12<---------YAB1<-------            --------->ARR14(2)  <---------MYB59 --------->AHL20(2)    <--------ZAP1--------->YAB1 -------GT1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------AHL20(2)  ----------->GT1      <---------YAB1   actattgttttataaatccgcttatctagacgggcctaacctagtaaatatataatacacatcttatcattcggtcaaaatattatgaaaacatcattaa  18131600     <---------ICU4     --------->ATHB12    --------->ICU4            ---------->DOF2                                --------->ANAC46    <---------YAB1   <---------AHL20(2)                                     --------->SPL7 ----AHL20(2)      --------->ANAC58                                       --------->TOE1(2) --->AHL20(2)      --------->ANAC58              ------>ZmHOX2a(1)    <-----------GT1 >TOE2(3)          --------->ANAC55(2)        <-----------GT1   <---------AHL20(2) --YAB1        <---------HSFB2a(2)        ------->TEIL         --------->AHL20(2)           <--------   aatttgatgattacattccataagtaatttgttaaagcattatgcattttcctgttctatggacattaatttgaaccatacgactccatctaattcactt  18131700                                                                      <-------TEIL                                                                   <---------ANAC58                                                                <---------MYB52(1)                                                               <----------DOF2                                                               <-------GAMYB                                                              <---------ANAC58                   --------->ARR14(2)                     --------->ALFIN1       <---------ZAT2                                   <---------ANAC58       --------->At4g35610                              <---------ANAC46       --------->ZAT2                                   <---------ANAC58       <---------At4g35610                         --------->ICU4  <---------ANAC46             -----    <------NtERF2  <---------ARR14(2)           --------->WRKY18(1)<---------ANAC58         ---------    <---------At4g35610    <----------DOF2     <--------ZAP1  <---------ANAC58   <---------ATHB12 ---GT1<------NtERF2   ------>ZmHOX2a(1)   --------->MYB52(1)--------->ZAT18   --------->ANAC46------   gttctcggcagctagcattcgaatcctgacttttcaaatacaaattatcggtcaagatgggtgtgcgttacgttcatttacaaatcactaaaaatgagtg  18131800      <--------HAHB4      --------->ATHB12      <-------TEIL                <-----------HVH21      <---------ICU4    <-------TEIL                 ------>MYB46(1)     --------->ICU4   --------->ARR14(2)             -------->P     --------->MYB46(3)           <---     <---------YAB1   <---------ARR14(2)             ------>MYB83  ------------>CBF            <-----   --------->YAB1   ----------->GT1                 ------>ZmHOX2a(1)                          <----- ------>GT1        <---------ANAC55(2)           <---------YAB1  ------>ZmHOX2a(1)    ------------>CBF >ATHB12        <---------ARR14(2)    --------->WRKY38(1)  <---------ATERF1(1)     ================== --->ALFIN1  ------------>CBF         --------->WRKY12--------->DEAR3(2)           <----------DOF2---   gtgaataatcatttggacaatacggatacattcatcgaagttgactccattatcctaccgtcgtctcctaacaatcgaagcacaactttgcaatggcagc  18131900                                                          --------->ANAC46                                                         <---------LBD16                    ---------                                                      <---------GLK1(1)                     ---------                                                      --------->GLK1(1)              <------NtERF2                                                      --------->CCA1(2)              --------->ATERF1(1)                    <---------ANAC46                 <---------GLK1(2)             <---------ANAC46                    <---------ANAC58                 --------->ARR14(2)            <---------ANAC58                    <---------O2                     <-----------ARR10             <---------ANAC58 -                    --------->O2                     <---------ARR14(2)           <---------LBD16   <                    <---------ANAC58               ----------->ARR10          --------->At4g35610   -    --------->LBD16 <---------TGA1a              <---------At4g35610          <---------At4g35610   < ------ARR11(3)--------->LBD16                   --------->At4g35610          ----------->RAV1(2)   - ----At4g35610--------->LBD16                  <------ZmHOX2a(1)         --------->ANAC46   --------- -NtERF2     <---------LBD16 <---------ZAT6 <---------LBD16            --------->At4g35610  --------- =============================bZIP_DOF      <---------HSFB2a(2)        <---------At4g35610<----------DOF2 ------>At4g35610  --------->ALFIN1         --------->LBD16  --------->MYB52(1) ----------->HVH21 <--   atcttccgaaatactcccggagtcgtggcaagtgttcatcaatttccgaggagcagatttgcgcaacggtttcatcagccatctggcgggagctttgacc  18132000                                                          <----------DOF2                                                          ------>ZmHOX2a(1)                                                ------>ZmHOX2a(2)                                                ===========================HOX2a_HOX2a                                                =================HOX2a_HOX2a                                                ==================================HOX2a_HOX2a                                               <------ZmHOX2a(2)                                               ============================HOX2a_HOX2a                                               ===================================HOX2a_HOX2a >WRKY38(1)                                    ==================HOX2a_HOX2a -->HVH21                --------->ANAC55(2)  <---------ARR14(2) ---------->RAV1(2)      --------->ANAC46     <---------AGP1 ---------At4g35610      --------->ANAC58     <---------ARR11(3)                   <---------GLK1(1) -------->At4g35610      <---------ANAC55(2)  <-----------ARR10                    --------->GLK1(1) ---------ZAT2           --------->ANAC55(1)  --------->ARR11(3)            <---------ARR14(2) -------->ZAT2           --------->ANAC58     <---------ARR14(3)            --------->ARR14(2) >WRKY12                <---------LBD16       --------->ARR14(3)           <------ZmHOX2a(1) >WRKY45              <---------REM1(2)       --------->ARR14(2)     <---------ARR14(2) ---------RAV1(2)--------->REM1(1)          ----------->ARR10       <------ZmHOX2a(1)  --------->ZAT18   tcagctggaatcacatactacatcgacacggaagaagtcccgagcgaagatctcactgtccttttcaagaggatagaggaatcggaaatcgcactgtcca  18132100              <---------At4g35610             <---------YAB1           <---------ICU4           --------->YAB1          <---------ATHB51                                                  <---------At4g35610          --------->ICU4                                        ---------->DOF2          <---------ATHB12                         <------ZmHOX2a(2)        --------->At4g35610     --------->ANAC58                             <---------ARR11(3)     ---------->DOF2     --------->ANAC58                   <---------ZAT2       --------->ANAC58        <---------ICU4  <---------HSFB2a(2)                   --------->ZAT2       --------->ANAC58        --------->YAB1  --------->HSFB2a(2)         <---------MYB46(3)  --------->ARR11(3)---------->DOF2--------->GLK1(2)   tcttctcgagcaattatgctgagtcaaaatggtgtttggacgagctcgtgaagatcatggaacaagtaaagaaaggaaagctcagaatcatgcccgtctt  18132200                                                                                           ------>MYB46(1)                                                                                           ------>MYB83                                                                                         <-----------                                                                                         <---------MYB59                                                                                         --------->TOE2(3)                                                                                         ------------                                                                                        <------------                                                                                  ------>MYB46(1)                                                                                  ------>MYB83                                                                                  ----------->RAV1(1)                               --------->MYB52(1)                     --------->ANAC58  --------->ANAC55(2)                               --------->ARR14(2)                     --------->ANAC58  -------------                    --------->ALFIN1                            ----------->GT1 --------->MYB46(3)                 --------->ALFIN1                         --------->LBD16       <---------MYB55(2)                <------ZmHOX2a(1)     <---------HSFB2a(1)<---------ANAC46       <---------MYB59        --------->ANAC58       <---------ARR14(2)       <---------LBD16     --------->MYB46(3)        --------->ANAC58   <---------At4g35610         --------->MYB52(1) --------->MYB52(1)      ---------->DOF2      --------->At4g35610       <----------DOF2---------->DOF2     -------------   cttcaacgtgaagccagaggaggtgagagagcagaacggagagttcggacttaagctttacggagaaggtaaaagcaaacgacccaacatacctaattgg  18132300         <---------ANAC58       <---------ANAC58         <---------ANAC58  <---------ARR14(2)     <----------DOF2       --------->ARR14(2)              --------->AHL20(2)            --------->YAB1 ----AGL15           --------->ANAC58                  ----------->GT1              <---------ANAC58 --->AGL15           --------->ANAC58                  <-------TEIL              <---------CCA1(2) -----AGL1           --------->ANAC46                 <--------P                 <---------MYB52(1) ---->AGL1    <---------DEAR3(2)<---------ANAC58   <---------TOE2(3)       <-----------GT1          < ---->AG <---------RAP2.6(2)--------->CCA1(2)      --------->MYB59  <---------YAB1  <---------ANAC58<   gagaacgctttgcggtctgtcccaagcaagataggcttgaatttggcgaattttaggtagataaattgttcttattttgacccgtttcttatcgtagtga  18132400  Previous    Next  AGI:  At5g44870.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51570.1); similar to CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G17880.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64653.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); conta Range:  from: 18131893    to: 18135835    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version