Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <-------GAMYB                                                                                      --------->MYB55(2)                                                                                    <------NtERF2                                                                                    --------->At4g35610                                                                                    <---------At4g35610                                                                                    <-------GAMYB                                                                                   <---------RAP2.3(1)                                                                                   <---------ERF1                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                                                                                  <---------RAP2.6(2)                                                                                  <---------DEAR3(1)                                                                                  <---------RAP2.3(3)                                                                                  <---------RAP2.3(2)                                                                                ------>NtERF2                                                                                <---------DEAR4(2)                                                                                <---------RRTF1(1)                                                                                <---------ATERF1(1)                                                                                <---------ERF1                                                                                <---------RAP2.3(1)                                                                               <---------RRTF1(3)                                                        --------->DAG2         <---------RAP2.3(3)                                                     --------->REM1(2)         <---------RAP2.3(2)                                                   --------->LBD16             <---------DEAR3(1)                                                  <---------ANAC46            --------->ATERF1(1)                  ------>NtERF2              <----------DOF2         --------->At5g28300                 ----------->HVH21           <---------GLK1(1)     <---------DEAR3(1) <---------MYB46(3)               --------->At4g35610          <---------ANAC58     --------->MYB52(1)<---------MYB46(3)           <---------ARR14(2)               <---------ANAC58   --------->DEAR3(2)--------->ATERF1(1)           --------->ARR14(2)         --------->GLK1(2)---------->DOF2       <---------ATERF1(1) >MYB52(1)<------ZmHOX2a(1)      ---------->DOF2 <---------LBD16----------->HVH21<------NtERF2   ttcaaaaccagaggaatcgctgacattgttgaagagaaagaaactggctttcccgtgtaaagcgaagcgacggtgaagacgacggcggctgttgagagaa  18128600                                                                <------MYB83                                                              <---------WOX13(1)    <------ZmHOX2a(1)                     <---------ANAC58                       --------->ATHB12  ================HOX2a_HOX2a                     <---------ANAC46                      <---------YAB1     ------>ZmHOX2a(2)                     <---------ANAC58                    --------->YAB1       =============HOX2a_HOX2a                     <---------bZIP60(2)                 <---------ANAC58    --------->At4g35610   --                    ----------->STF1                     <---------ANAC58    <---------At4g35610   <-                   <---------TGA2(2)                <-------TEIL<------MYB46(1)----------->HVH21   --                  ----------->TGA1              --------->HSFC1(2)          <---------AGP1         <-                <---------At4g35610             --------->HSFB2a(1)      <---------WOX13(1)   -------                --------->At4g35610             <---------HSFB2a(1)    <<<<<<<<<RAP2.2  --------->ALFIN1             <------ZmHOX2a(1)  ----------->GT1 <---------HSFC1(2)    <---------TOE2(3)<------ZmHOX2a(1)   gagagaaggcgaagaggaagatgacgtagatgaattgataaatgagaagaagggtccattcgtgattggttttagattgatctgaaggaggagttgcatc  18128700                     ---------->DOF2                  <------MYB83                  <---------ANAC46                 <------MYB46(1)                 --------->MYB59                 <---------MYB46(3)                 <------MYB83               <--------P              <---------ANAC58              <---------ANAC58             <---------MYB46(3)             <------MYB46(1)             <------MYB83         --------->ATHB12        <---------TOE2(3)    <---------At4g35610    --------->At4g35610                                                        <---------TOE2(3) ------->ZAT2--------->MYB55(2)                        ----------->GT1 <---------TOE2(3) --------ZAT2--------->ATHB12               <---------ANAC58     <---------TOE1(3) ------->At4g35610----------->GT1           <---------ANAC58     <---------TOE2(3) --------At4g35610<------MYB46(1)      <------ZmHOX2a(1)----------->GT1<---------TOE1(3)      <------ >TEIL  <---------YAB1        <---------KAN4(2)  <------ZmHOX2a(1)<---------ZAT6<---------ANAC46   tagctgagctaagattggttgggtaaagagggaatgagcgaggattgcgaaggagagagggaaaattagggttagggttatgaggtagaaggtttttggg  18128800                                                                         <-------TEIL                        --------->ANAC58                                <------ZmHOX2a(2)                        --------->ANAC58                               --------->ARR11(3)                        --------->ANAC46                               --------->ARR14(2)                        <---------ANAC55(2)                            <---------ARR11(3)                        --------->ANAC55(2)                            <---------ARR14(2)                   --------->ARR14(2)                                  --------->AGP1                   >>>>>>>>>GATA-4                                    --------->GLK1(1)                   <---------ARR14(2)                          <---------At4g35610                   >>>>>>>>>GATA-1                             --------->At4g35610                   >>>>>>>>>GATA-3                             <---------ZAT14                   >>>>>>>>>GATA-2                             --------->ZAT14                <---------ANAC46  <---------ANAC58          --------->At4g35610         <---------TOE2(3)              <---------ANAC46    <---------ANAC58          ----------->RAV1(2)         <---------TOE1(3)     <---------LBD16    --------->ANAC55(1)             --------->ARR11(3)        ----------->ARR10 ---LBD16  <---------MYB46(3)     <---------ANAC46      <---------ARR11(3)     <---------ANAC46   gaaaatttggggattgttgtggattcacgtaatatgccttgaatgttgagaaattgaagctcttctgcagcgagatccatggctgagattagggtttgta  18128900                                          <------ZmHOX2a(2)                              <---------DAG2                          ------>ZmHOX2a(2)                          ----------->HVH21------>ZmHOX2a(2)         <------ZmHOX2a(2)                        <---------ANAC58 <---------ARR11(3)         <---------ARR11(3)        -------                        ----------->GT1  --------->ARR14(2)         --------->ARR11(3)        -------                        <---------ANAC58 <---------ARR14(2)        --------->GLK1(1)     <----------ID1                  ---------->DOF2        --------->ARR11(3)        <---------GLK1(1)   ---------->DOF2              ----------->GT1 <----------DOF2        <---------AHL20(2)           ----------->GT1   gagagattggagaagaatgttaaagggggtgactttttttgaagatcggatggattttttttttctcagagatctcaacagggagagaaaaaagacaagg  18129000                           <-------GAMYB                              --------->ANAC58                          <---------MYB46(3)                          --------->ANAC58              -                          --------->MYB55(2)                   ---------->DOF2                      <                          --------->MYB111(2)     --------------->AGL15                        <-----                          --------->MYB52(2)      <---------------AGL15                        <-----   <-----------HVH21 --------->DAG2              <-----------------AGL3                        <-----   --------->At5g28300 ------------>MYB.PH3(2)   ----------------->AGL2                --------->CCA1(2) -->ANAC58          ---------->DOF2              <-----------------AGL2           ---------->DOF2   < -->ANAC58   ----------->GT1           *TSS      ----------------->AGL3      ---------->DOF2 <-------   aagacggtcacttcatggttaaaaaagtttgttggaaaatgaactaaaaattctaaatttagcatcaaagacacgacgagaaagaaaagagacagggtca  18129100                                             --------->YAB1                                             <---------ICU4      ---------->ID1                        <---------ATHB12 -------->ARR11(3)                       <---------AHL20(2) ---------GLK1(2)                       <---------AHL20(2) ----WRKY38(1)                  --------->ZAT18 ----WRKY12                     <---------ZAT18        <-----------GT1 ----WRKY45                     <---------ZAT14 ----------->GT1                          --------->ZAT14 ---------ARR11(3)              --------->ZAT14<---------YAB1                           <---------MYB52(1) ----HVH21         ---------->DOF2      --------->AHL20(2)                             <-------GAMYB   aagattttgtttttttttttaaaaagaaatatagttcactaattaaatcatggttaattaccttcttatttgctaagaaaatttgagacagttaactaaa  18129200                                                                                  <---------AHL20(2)                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                              <---------AHL20(2)                             --------->MYB59                                 --------->AHL20(2)                             --------------->AtSPL3 <---------HSFB2a(1)      <---------AHL20(2)                          --------->GLK1(1)         --------->HSFC1(2)    <---------AHL20(2)               --------->ICU4--------------->AtSPL8 --------->HSFB2a(1)   <--------HAHB4              --------->ANAC58                      <---------HSFC1(2)    --------->ATHB51              --------->ANAC58                  ----------->GT1           -------->ATHB1          ---        --------------------->WRI1             ----------->GT1            --------->AHL20(2)      <--   <----------DOF2        <---------GLK1(1)--------->DAG2                <---------ATHB51         ---   <---------DAG2       <------ZmHOX2a(1) ---------->DOF2                --------->ICU4   -----------   actcacttttcttcgtaagcattgtaggaattcggtactattcaaaaagagggaaaattccaaaacaaaaacacaattatttattaattagacgtttaat  18129300                                                                                                  <--          <---------YAB1                                                                     <-------          <---------TOE1(3)                                                                  --------          <---------TOE2(3)                                                                  <-------      <---------DAG2                           <---------ZAT18                               <------- -------->GT1                         --------->YAB1                                         -------- -------ANAC55(2)                  --------->YAB1    <---------AHL20(2)                      -------- ------>ANAC55(2)                --------->AHL20(2) --------->AHL20(2)    <---------TOE2(3) <-------- >GT1 <----------DOF2>>>>>>>>>>GT-3b  --------->AHL20(2)               <---------WOX13(1)   <--------   atgtaatactttatggttagaagaaaaatatgcatattaataaaaattgtgcaattttatcttcaaaaaactaattgatgttattttcatatcaataatt  18129400                                                       <---------AHL20(2)                                                  <---------TOE2(3)                                                 --------->AHL20(2)                                              --------->TOE2(3)                                             <--------HAHB4                        <---------YAB1                                             --------->ATHB12                   <---------AHL20(1)                                             --------->YAB1                     --------->AHL20(2)                                             <---------ICU4                --------->AHL20(1)                          <---------------AGL15  --------->YAB1            <---------AHL20(2) ---------GT1             --------------->AGL15<---------YAB1              <---------AHL20(1) --ICU4                <-----------GT1      <---------YAB1                 --------->AHL20(2) ->ATHB51        <---------AHL20(2)         --------->ICU4                --------->AHL20(2) -ATHB1         --------->AHL20(2)          <---------ATHB12              <---------AHL20(2)  <------ --AHL20(1)     <---------AHL20(2)        --------->WOX13(1)           <---------AHL20(2)    <------- ->YAB1        --------->YAB1            <---------AHL20(2)           --------->AHL20(2)<---------AHL20(2) ->AHL20(2)<---------AHL20(2)            --------->AHL20(2)         --------->TOE2(3)  --------->AHL20(2) -ATHB12  <---------AHL20(2)            <---------ATHB12         ----------->RAV1(1)   <---------AHL20(2) -ATHB51  --------->AHL20(2)          --------->WOX13(1) --------->ANAC55(2)    <---------AHL20(2)   ttacaacaaaattttaattttaattttactcttactagttcaattaatcattaatatttaagtgatgcaacattaattttattttatttttaaatttact  18129500  Previous    Next  AGI:  At5g44860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19950.1); similar to hypothetical protein MtrDRAFT_AC160516g6v2 [Medicago truncatula] (GB:ABN08773.1) Range:  from: 18127685    to: 18129039    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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