Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------ICU4              <---------AHL20(2)                           <---------YAB1              --------->AHL20(2)                          --------->ARR11(3)                <--------             --------->AHL20(2)                           <---------ARR11(3)           ------->TEIL             <---------AHL20(2)                          --------->YAB1                <-------TEIL             --------->AHL20(1)      <---------ZAT18    <---------YAB1             --------------->AtSPL8             <---------AHL20(1)      --------->ZAT18    --------->ICU4          <---------TOE2(3)         --------->AHL20(2)      --------->DAG2       --------->YAB1           --------->MYB52(1)         <---------AHL20(2)     ---------->DOF2      <------ZmHOX2a(2)         <---------DOF5.7(2)        --------->AHL20(2) --------->AHL20(2)       --------->ARR11(3)         <-----------GT1      -   aactatgtgatttaatttatttgtttgaaaaaaataaagtgtgctagaatatgggatcatgatcatttccattctgaaaattaacgatgtacattttttt  18125100                                                                     <---------AHL20(2)                                                                  ----------->GT1                                                            <---------YAB1                                                      --------->AHL20(2)                                                      <---------AHL20(2)                                                     --------->AHL20(1)                                                     --------->AHL20(2)                <---------AHL20(2)                   <---------AHL20(2)    <---------AHL20(2)               <---------AHL20(2)                    <---------AHL20(1)   --------->AHL20(2)        <---------ANAC46                        --------->AHL20(2)--------->MYB52(2)        ----------->GT1                         <---------AHL20(2)--------->MYB59               -----    --------->ARR11(3)    <---------YAB1       --------->AHL20(2) --------->MYB46(2)           <----- -AHL20(2)    <---------AHL20(2)           --------->AHL20(2)   <---------MYB52(1)             ------ --------->DOF2--------->AHL20(2)          <---------AHL20(2)  ------------>MYB.PH3(2)     ----------   ttaaaagatagtgtatattaattagtttgttatagttttgaccaaaaaattaaaataaaattatcagttagttaaatttaaaatccaatctgaaaaagat  18125200                                                                                   --------->HSFB2a(2)  --------->ANAC55(2)                      ----------->GT1              ---------->DOF2 ---->CCA1(2)                             --------->HSFB2a(2)      ------------>CBF<---------HSFB2a(2) ----ARR11(3)                             <---------HSFB2a(2)--------->AHL20(2)   <---------LBD16 --->ARR11(3)   ---------->ID1        <---------ANAC58    ----------->GT1   ---------->DOF2  <------- >DOF2  <XXXXXXXXXXXXXXXXXXXXMIR866-5P<---------ANAC58 ---------->DOF2 <---------ATHB12  --------->ICU4   atatatgtaacaaaatttgtttttttaaaaaacactctctgcgtctggaaaaaaaaaaaaagattaaaaaccaataaagaaagtttcggaactaattagg  18125300                                                                                          <---------YAB1                                                            <---------ANAC58        <---------ARR11(3)                                                            <---------ANAC58        --------->ARR11(3)                                                            <---------ANAC46      --------->DAG2                                                      <---------TOE2(2)   <---------HSFC1(1)                               --------->ANAC58       <---------TOE1(2)   >>>>>>>ZML2   <-----------GT1                      <---------At5g28300            <---------MYB52(1)   --------->HSFB2a(2)    ----        <---------ANAC58       --------->ANAC58  --------------------->WRI1     ---------->DOF2 -----   <----------DOF2   <-----------GT1           --------->At4g35610        <---------HSFB2a(2)   <---- --ICU4 <---------ANAC58 <-----------HVH21     <---------At4g35610        --------->HSFC1(1)    <----   gcttccttttgcttacatgaaatataccgtcgcaagtcatctagcactctgcttcgtaagtttcgtcttatctgttctagagaaaaggtcttaccattcc  18125400                                                     --------->GLK1(2)                                                    <---------GLK1(2)                                                    <---------ARR14(2)                                 ----------->HVH21  --------->ARR14(2)                    <---------ALFIN1                      ----------->GT1           <---------ZAT18  ---------->ARF1         --------->MYB46(3)                     <-----------------------TaNAC69(2)  <------------CBF---------->DOF2------>NtERF2 ----->LBD16<----------ID1 <------------CBF<---------ANAC46  <---------ANAC58       <---------ZAT18 ---->HSFB2a(2)     <------ZmHOX2a(2)      <---------ANAC58  <---------ANAC46     <---------At4g35610 -----HSFC1(1)     --------->ARR11(3)      <---------ANAC58  <---------ANAC58  <-------TEIL -----HSFB2a(2)    <---------ARR11(3)------>NtERF2----------->ARR10    --------->ANAC46--------->RAP2.6(2)   agaagaagtttatgaagacaagatcagtaaattgtccgacgacttgcttgtgcagattctattgcttgtctccacaaaagatgcagtggccaccacggtt  18125500                                                                                          <---------WRKY18(1)                                                                                       <---------ANAC58                                                                                  <---------MYB46(3)                                                                                <---------ANAC58                                                                           <---------ARR14(2)                                                               --------->ANAC58 <-------GAMYB            <---------ANAC46 --------->YAB1                    --------->ANAC58 <---------ANAC58            <---------ANAC58 <---------ICU4                   --------->DAG2   <------MYB83            <---------ANAC58<---------ATHB12                 ---------->DOF2   <------MYB46(1)           <------NtERF2    --------->ICU4           <---------YAB1        --------->ARR14(2)  <-----          ------>NtERF2 ------------>CBF           --------->YAB1  --------->MYB52(1)  <---------ANAC58   ttgtcaaaacgctggcgtttcatatggacaatgatgcctagacttgagtacaaagatgataagaaaagcaaacagagtatttggttgtttcttgaccagt  18125600                         <---------ZAT14                         <---------REM1(2)                                                          -                 <---------ZAT2                                                                     -                 --------->At4g35610                                                               <-                 <---------At4g35610                                                              <--                 ----------->RAV1(2)                                                              <--            --------->ANAC46                                                          <---------ANAC58            --------->ANAC58                                               --------->RAP2.6(3)   <---           ---------->DOF2<---------ALFIN1                        <---------TOE2(3)   <---------ANAC58 ------HVH21--------->ANAC58  <---------ZAT2                 ------>ZmHOX2a(1)<------NtERF2----------   cactgcaactccacaaggcacctgtgctacacagcttgtgtatcaaacttggttcacaatgtcctgttgatgttgaagtcggcaaatgggttgcaaaggc  18125700                                                        <---------At4g35610                                                      --------->YAB1                                                     <---------ATHB12                                                   --------->WOX13(1)                                               <---------ARR11(3)                                               <---------ARR14(2)                                               --------->AGP1 --------->TOE2(2)                  --------->At4g35610          <-----------ARR10             <---------ANAC58                  --------->ARR14(2)    ------>ZmHOX2a(2)                         --------->GLK1(1) -------->WRKY38(1)  ---------->DOF2       --------->LBD16    --------->TOE1(2) -------->WRKY12  <---------At4g35610      <------NtERF2--------->ZAT2 --------MYB52(1)--------->ANAC58          --------->At4g35610--------->TOE2(3) -----GAMYB  <---------ANAC58              <---------At4g35610<---------MYB59         --------->ANAC58 -------At4g35610--------->ANAC58        <---------LBD16--------->At4g35610   <-------MYC3        --- ------MYB46(3) --------->SPL7 <---------GLK1(2)<------ZmHOX2a(2)             ------->MYC3  <-------- >DOF2 <----------DOF2       <---------TOE1(3)--------->At4g35610      <----------DOF2--------->ANAC58   cgttgatcgctttgtgcgtaagctaaagtttaagcttctctggtccgcagatccaatcagcttacctaagagcctttacacatgtgaaacgctagtgaaa  18125800                                                 ------>NtERF2                                              <---------ATERF1(1)                                            ------->MYC2                                            <-------MYC3                                            ------->PIF5         ------>NtERF2                      <-------PIF5        ----------->HVH21                   <-------MYC2        <---------ETT(1)                    ------->MYC3                    <---------ATHB12   --------->ARR14(2)       <-----------GT1--------->TGA1a                ------>MYB46(1)           <   --------->ARR11(3)    <---------ARR11(3)==============================bZIP_DOF                   <   --------->GLK1(2)     <---------ARR14(2)<---------ANAC58             --------->TOE2(3)          --   <---------ARR11(3)    --------->ARR14(2)<---------ANAC58             <---------MYB59            --   <---------ARR14(2)    --------->ARR11(3)<---------TGA1a    ---------->DOF2        <---------ANAC46 -------->GT1  <---------GLK1(2)        <---------LBD16 ----------------->AGL3     ----------->GT1 <- -ZAT6  --------->ANAC46 <---------GLK1(2)--------->LBD16--------->TOE2(3)------>MYB83    ---------->DOF2   ctgaaaatctccgacaaggttctcacagattttccttcttctcccgcgtgcctcccatcccttaaaaagctcaacctaatcaatgtggtttataaagacg  18125900               <-------TEIL            <------MYB46(1)            <------MYB83           --------->MYB59 ---------ANAC58 ---------ANAC58 ------->HSFC1(2)                <---------MYB52(1) ------->HSFB2a(1)      <---------ZAT2             --------->ALFIN1             <---------GLK1(2)<--- --------HSFC1(2)       <---------At4g35610 --------->TOE1(2)       --------->YAB1        <---------YAB1   atgcttctctcattaggttcttatcaagctgctctgttattgagaaactacgagtggaacgagaagggaatgacaatatcaagaatttcaatgtgatagt  18126000  Previous    Next  AGI:  At5g44850.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G05080.1); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 18125531    to: 18126820    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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