Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                          --------->MYB52(1)       <-                                                                          ----------->RAV1(1)   -----                          <---------WRKY18(1)                          --------->ANAC58     ------>NtERF2 ---->ZmHOX2a(2)       --------->TOE2(3)                    --------->GLK1(2)              --------->ANAC58 ----ZmHOX2a(2)        --------->TOE1(3)      --------->ANAC58         --------->ANAC58    --------->RAP2.6(2) ------AGP1   --------->ICU4<-----------------AGL3         <---------GLK1(2) ------->GAMYB --------->ANAC46 ----->ARR11(3)  <---------YAB1               --------->ANAC46       ---------->DOF2       --------->ANAC58 ------ARR11(3)--------->YAB1                 --------->ANAC58 ----------->GT1     <----------DOF2<--   atctcaaaaatccaaaatgatgaaaccttgactaaattagggtcgaagacgacatcggctcgattctgtaacaaagcaacagaggctttgaagacgccat  18096800                                                                             ---------->DOF2                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)  --------->ARR11(3)                                                       <---------ATERF1(1) <---------------AGL15              --------->At4g35610                     --------->WRKY38(1)  ------>ZmHOX2a(1)           <---------ZAT2                        --------->MYB52(1) ------->TEIL        <---------ARR11(3)           <---------At4g35610             --------->ANAC58        <---------CCA1(2)  <---------HSFC1(2)        ---------->DOF2           --------->ANAC58    ----------->HVH21   --------->TOE1(3)   <-------TEIL                   --------->ANAC58   <-----------HVH21    --------->TOE2(3) --------->TOE2(3)         --------->YAB1  --------->ANAC58        <---------GLK1(2)  --------->HSFC1(2) --------TOE1(3)      ------->GAMYB        --------->ANAC46    ----------->RAV1(2)--------->LBD16 --------TOE2(3)     --------->ANAC46 --------->At4g35610    ------>NtERF2<-----------------AGL1 ---->DOF5.7(2) <----------DOF2   --------->ANAC46   <---------MYB52(1)   ----------------->AG -------DOF5.7(2)   <---------LBD16  ----------->RAV1(1)    --------->DEAR3(1)  <---------LBD16   taacgttcatcaaagctgcttcaacggaattagaacaagcagcacaagtcataccggtgactccgacctgaatcttccttaaaccggaaacatctcttcc  18096900                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                              -------                                                                                              <------                              --------->MYB52(2)                                              -------                           <---------SPL7          --------->HSFB2a(2)                        -------                          <---------ANAC58         <---------HSFB2a(2)                      ---------                          <---------ANAC58      ------->TEIL                                <--------                       <---------DEAR3(1)    --------->ANAC58                    ------>ZmHOX2a(2) --                   <---------YAB1            --------->ANAC58                  <---------ARR14(2)  --                  <---------ARR11(3)         --------->ANAC55(2)               --------->ARR11(3)<---                  --------->ARR11(3)         <---------ANAC55(2)       <---------CCA1(2) >>>>>>>>>TBF1                 --------->RVE1(1)         --------->CCA1(2) ------>MYB46(1)  <---------ZAT14 <------                 --------->CCA1(1)      <---------YAB1       ------>MYB83     --------->ZAT14------->TEIL   ttcttcgattttagtcaaaatatcatcggcgttcgcttcgttgtgatacgaatcgagaagaccaacttcttccatatcactgatctgggaagaagaacct  18097000      --------->LBD16    <---------LBD16 --------->WRKY12 --------->WRKY38(1) ----------->HVH21 -----------HVH21 ---------MYB52(1) --------At4g35610                   <------NtERF2 -->HSFC1(2)                       --------->ANAC46                                               --- ---HSFC1(2)                      <------NtERF2                                                   <-- -->MYB46(3)                      --------->RAP2.3(1)                                             --- -->HSFB2a(1)                <---------REM1(2)  <----------ID1   <------MYB46(1)                  <-- >ARR14(2)          <---------ARR14(2)      <----------DOF2      <------MYB83                  ------ -ARR14(2)      --------->At5g28300--------->DEAR3(1)          <--------P                      <----- ------->At4g35610 <---------GLK1(1)------>NtERF2    --------->ANAC58                          <----- ------->LBD16 ----------->GT1   <---------ATERF1(1) --------->ANAC58                 ---------->DOF2 ------LBD16 <---------At4g35610--------->ANAC46--------->ANAC46<---------AtMYB61   --------->ARR11(3) ---HSFB2a(1)--------->At4g35610<---------DEAR3(1) ---------->DOF2       <---------GLK1(1)  <------ZmHOX2a(1)   ccggtgaccggagtaagctgtaaatcccgtctactcggcgccatttctttacgacaagcagacgggaaggttgagaaatcggagaagataaagaggaagg  18097100                                                                    <---------MYB52(1)                                                                   <---------DAG2                               ----------->GT1                     <----------DOF2                           <---------YAB1                         --------->TOE2(3) ------>ARR11(3)           --------->ICU4                  <----------DOF2 -------ARR14(2)         --------->YAB1                <----------DOF2       <<<<<<<<<<<<<<<<<LFY ------>ARR14(2)        <---------YAB1              <---------ARR11(3)       --------->YAB1 -------ARR11(3)        --------->ICU4              --------->ARR11(3) --------->ANAC55(2) ----->GT1           --------->ICU4        --------->GLK1(2)    <-----------GT1 -MYB83 ---------->ID1--------->YAB1       <---------ARR11(3)   ---------->ID1 -MYB46(1)         --------->YAB1          --------->ARR11(3)  <-----------GT1         <------ZmHOX2a(1)   tatcttcttcgtcttcttcaacgatgatgatgatggtgatttgaaaatctcagagacctttcttttttcctttatgtaataacaatggaggaatttttga  18097200                                                          <---------ANAC46                                                      <---------YAB1                                                     <---------AHL20(2)                                                   <---------YAB1               *TSS <----------ID1                 <---------AHL20(2)     <---------AHL20(2)     ----------->GT1     <---------AHL20(1)     --------->AHL20(2)    --------->DAG2       --------->AHL20(1)            --------->ALFIN1    --------->AHL20(2)    ---------->DOF2      --------->YAB1       --------->CCA1(2)  ------------>CBF   agaaaaaaaaattttaaaaaaaaaaacaaaaagtaaaaacaaaactcaaaaatattattttcgtagagagatagaagaaggtggaagatagcaatttttc  18097300                    --------->YAB1                    <---------YAB1                 <---------ICU4                      <---------AHL20(2)          ------->TEIL                               <---------AHL20(1)       --------->ANAC46                              --------->AHL20(1)       --------->ANAC55(2)                          --------->YAB1                         --------->ANAC46       --------->ANAC55(1)               <----------DOF2                                   --------->ANAC58       --------->ANAC58         --------->TOE1(3)   <---------AHL20(2)         ------>ZmHOX2a(2)       <---------ANAC55(2)      --------->TOE2(3)   --------->AHL20(2)     <---------YAB1  --------->ANAC58       --------->ANAC58     <-----------GT1  ----------->GT1     <----------DOF2 <---------YAB1     -   aactaaaacacgtatcagataatgacaattttacccttaatcactttgagtaaattatatttatgggcttttttgttgtgatcgtcattgtacacgacta  18097400                                       ================================HOX2a_HOX2a                                      <------ZmHOX2a(2)                                      =================================HOX2a_HOX2a                                     --------->ARR11(3)                                     <---------ARR11(3)                                     --------->ARR14(2)                                     <---------ARR14(2)                                    <------ZmHOX2a(1)                          --------->ATHB12                          <---------AHL20(2)                           ----------->GT1                         <---------AHL20(2)                       <---------At4g35610      <---------AHL20(2)                      --------->AHL20(2)                          --------->ZAT2     --------->ANAC58                      <---------AHL20(2)                          --------->At4g35610--------->ANAC58  ---------->DOF2    --------->AHL20(2)------>ZmHOX2a(2)<---------AHL20(2)    ---------->DOF2    <--- -------->YAB1 ------->TEIL   --------->ATHB12   --------->LBD16<------ZmHOX2a(1)  ---------->DOF2   aatcaaaagaaaaactgaatctatttatttattgattaggatctatttatccgagtattttatataggagctgaagtaaaaaaagaaaagcattttatag  18097500                                                                                   <---------YAB1                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                           --------->YAB1                         --------->TOE2(3)                    --------->ANAC55(2)  <---------YAB1                         --------->ICU4                   <-------TEIL          --------->AHL20(2)                 ----------->GT1           <-----------GT1       <---------TOE2(3)                         --------->HSFB2a(2)          <---------YAB1      <---------AHL20(2)                           <---------HSFB2a(2)        <--------HAHB4        --------->AHL20(2)                          <---------LBD16        --------->YAB1    <---------AHL20(2) --------------->AtSPL8     <---------ARR14(2)        <---------ICU4 <---------TOE2(2) <---------AHL20(2)             --------->ARR14(2)       <---------YAB1  ------->TEIL     --------->TOE2(3)               --------->ARR11(3)          - --------->GLK1(1) ------->TEIL---------->DOF2                          --------->GLK1(2)           - ---ZmHOX2a(1) <---------------AtSPL3 --------->ICU4                   --------->RVE1(1)        -----   gagaaatctattattactatgtacgtatgtaattaaaggaaatattaatagtacttgttcaagagttaacaaaaaatctggaaatattaatagagtttta  18097600                                              <---------AHL20(2)                                         <---------GLK1(2)                                         <---------ARR11(3)                                  <---------YAB1<---------TOE2(3)                                  --------->AHL20(2)                               --------->ARR11(3)                    <---------ARR11(3)                               --------->ICU4<---------YAB1   --------->ZAT18              <---------AHL20(2)  <---------AHL20(2)          <---------ZAT14                 <------ <---------ARR11(3)            <---------AHL20(1)             --------->ZAT14                -------- --------->ARR11(3)            <---------ARR11(3)      --------->ARR11(3)           <---------DAG2 -------->CCA1(1)              --------->AHL20(1)      --------->GLK1(2)<----------DOF2    --------->TOE2(3) -------->RVE1(1)         ----------->GT1--------->ARR11(3)   <---------ZAT18       <----------DOF2 ---->AHL20(2)--------->AHL20(2) --------->TOE2(3)     <---------ARR11(3)     ------>ZmHOX2a(2)   aaatatctgaaaacatttaaaaaaaaaactgaaaatattaatagatttttaatgaaaaatctagagcactagagctttgatctatacttttttcattaaa  18097700  Previous    Next  AGI:  At5g44790.1    Description:  RAN1 (RESPONSIVE-TO-ANTAGONIST1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism. Identical to Copper-transporting ATPase RAN1 (RAN1) [Arabidopsis Thaliana] (GB:Q9S7J8); similar to HMA5 (HEAVY METAL ATPASE 5), ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT1G63440.1); similar to copper-transporting P-type ATPase [Brassica napus] (GB:AAL02122.1); similar to putative copper-exporting ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD25508.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69730.1); contains InterPro domain ATPase, P type ca Range:  from: 18092837    to: 18097215    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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