Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------ANAC58                                <---------ANAC58                             <--------P                            <-------GAMYB                            <---------MYB52(1)   <---------ZAT18         --------->LBD16   --------->ZAT18       <---------LBD16                                               --------->MYB52(1)   --------->ZAT14    <---------GLK1(1)           <---------ATHB12                     ---------->DOF2   <---------ZAT14    --------->GLK1(1)         --------->YAB1                      --------->ANAC58  ------->GAMYB   --------->ANAC58      <---------At4g35610             --------->TOE2(3) ----ZAT14        --------->ANAC46      --------->At4g35610             --------->TOE1(3) --->ZAT14        --------->ANAC58   ------>ZmHOX2a(1)           --------->AHL20(2) --------->ANAC58 --GT1           ------>ZmHOX2a(1)   <---------At4g35610   --------->YAB1         <--------P        <   acaactgcactaggcagtcctcgcaactccggttgcttcctctgctccactaatcactcactcataaaaaaatcccttaaccaggtaagtaaaggagaca  18068700                                                                     --------->DEAR3(1)                                                                  --------->ANAC46                                                                  --------->ANAC58                           <---------DAG2                         --------->ANAC58                       <---------ZAT18 ----------->GT1            ------->GAMYB                     <                   --------->DAG2      <------MYB46(1)          --------->MYB52(1)             ------         ----------->GT1   <----------DOF2          <---------ARR14(2)    ----------->GT1   ---------    --------->AHL20(2) --------->ZAT18 <------MYB83 --------->ARR14(2)------>NtERF2    ---------->DOF2 ---------YAB1    ---------->DOF2     --------->MYB59         <---------MYB52(2)  ---------->DOF2<---   ttttgataaaatagaaacaaaaaagcacactttttggtatttggtaatttcccaaatccctaaaacaaacgccaacgagaaaaaaaaagaaaagaaaccg  18068800   <---------YAB1  --------->AHL20(2)                                        ---------->DOF2  <---------AHL20(2)                                   ----------->GT1 --------->YAB1                                    --------->DAG2            --------->ZAT6 ---------YAB1                          --------->DAG2----------->GT1 <----------DOF2 ----->GT1                              <---------------AtSPL8       <---------ANAC58         ------- --->MYB.PH3(1)                        ---------->DOF2<---------ZAT6 <---------ANAC58        <------- ------MYB52(1)                ---------->DOF2    ---------->DOF2<----------DOF2 ---------->DOF2   ttattaaaattcgattgaaacccaaaattccaacaaagctaaaaagttcaaaaaaagtgttaaaaagctttgctttctctcactaaagcgtctagtggct  18068900                                                   <---------ETT(2)                                                   --------->ETT(2)                            ------                                                   <<<<<<<<<<bZIP23                            ------                                                   >>>>>>>>>>bZIP19                        --------->ANAC58                                       --------->ANAC58                                    --------->ANAC58                                       --------->ANAC46                               --------->LBD16                                       --------->ANAC58                          <---------ANAC58----                                     ---------->DOF2<---------DDF1               <---------ANAC58<---                                  --------->TOE1(2)>>>>>>>>>>bZIP23             <---------HSFC1(2)                                ------->TEIL       <<<<<<<<<<bZIP19             --------->HSFC1(2)--- -->At4g35610            --------->ARR11(3)       --------->DDF1                --------->HSFB2a(1) --MYB46(3)<--------P   <------ZmHOX2a(1) --------->WOX13(1)      --------->ZAT6<---------HSFB2a(1)<-   gaatacaattcgggttagagagagaaggaccttgaacgtagaagcaatccatgtcgacatgagcgataactctagcatccgatgcttccggtctcgctac  18069000                           --------->GLK1(1)                           <---------GLK1(1)                      --------->LBD16 -->P                 <---------At4g35610                                                     <------ --->MYB52(1)  --------->GLK1(1)                                                   <---------ANAC58 ----->ATERF1(2)      --------->At4g35610                              ---------->DOF2     --------->ICU4 ------ATERF1(2)     --------->ANAC46                            --------->MYB46(3)<---------ANAC46 ------>LBD16  <---------GLK1(1)                                <---------At5g28300<---------ANAC58 --------MYB52(1)   <---------LBD16<xxxxxxxxxxxxxxxxsmallRNA(i)<-----------GT1  --------->GLK1(1)<---   cggcatttctatttcagaaatctccgcagaaatcagagggagagagagagagagagagagagtttttaccaccgaaagaggggtttcttggggatgatga  18069100                      --------->YAB1                      --------->ATHB51                      <--------HAHB4                      -------->HAHB4                      <--------ATHB1                      <---------ICU4                      --------->ATHB12                     <---------YAB1                     --------->AHL20(2)                     <---------ATHB51                     --------->ICU4                   --------->YAB1            --------->ANAC58            --------->ANAC58         --------->ZAT18         <---------ZAT18                           --------->AHL20(1)        <---------ANAC58          --------->DAG2   --------->AHL20(2)      *TSS --------->LBD16  <------ZmHOX2a(1)      <---------AHL20(2) <---------YAB1  --------->AHL20(2)                <---------AHL20(1)           ---------->DOF2 ---YAB1<---------ANAC58--------->ICU4            <---------------AGL15   ------->TEIL ------WOX13(1) --------->YAB1   ---------->DOF2--------->YAB1         <---------MYB52(2)   ctgatgaatagcgcgcgaaaataataattaggagaaaaagcgagacagattaataaaatgagaaagtttcaaaacgaaccctcaaagaaactaaactttg  18069200                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                  --------->TOE2(3)      <---------ANAC58                                                         --------->ARR11(3)              <---------ANAC55(1)                                                         <---------ARR11(3)              <---------ANAC46                      --------->AHL20(2)                <---------ICU4                   <---------ANAC58                    --------->ANAC58                    --------->YAB1  <---------AHL20(2)  <--------                    --------->ANAC58                   --------->ICU4   <---------ICU4 <---------At5g28300                    --------->ANAC46           --------->ATHB12   --------->TOE1(3)<---------ARR14(2)   <-----------GT1  --------->ANAC55(1)       <-------TEIL ------>ZmHOX2a(2)       --------->ARR14(2)   caaaataacccgtttagaacacaagtaatttgacaacaaaacatgaaattcattgtaatgatctcaaaccctaaatatttctccaaatttgccgtgtcaa  18069300                                                                                                xxxxx                                                                                                <----                                                                                                xxxxx                                                                                               xxxxxx                                                                                               <xxxxx                                                                                             <-------                                                                                             <-------                                                                                           xxxxxxxxxx                                                                                           <---------ICU4                                                                                           <xxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                ------->TEIL <-------                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                             xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                           --------->ZAT2xxxxxxxxxxxx                                                                           --------->At4g35610 xxxxxx                                                                           <---------ZAT2xxxxxxxxxxxx                                                                           <---------At4g35610 xxxxxx                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ----------->GT1                                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------->AHL20(2)                                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------AHL20(2)                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------->ATHB12                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------->ATHB51                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -------AHL20(2)                                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------>AHL20(2)                                              --------->ICU4 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) -------AHL20(1)      <---------WOX13(1)                      <---------ATHB51<-------TEIL --------->YAB1 ---HVH21          <---------YAB1                   ----------->GT1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   attatttgtaaaaataggttgaagattgacattgttgtttttagagatttagtgtggtaacaaaattatggacatcaagctgcatctttcgaattatggt  18069400      <------MYB83      <---------ANAC46     --------->MYB46(2)     --------->MYB59     <---------MYB46(3)    --------->SPL7   <---------MYB52(1)   <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------SPL7  <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------>ZmHOX2a(2) xxxxxxxxxxxxxxxxxx>smallRNA(s2) ----P<------MYB46(1) xxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxsmallRNA(le3) --YAB1<---------MYB52(1) --TOE1(3) xxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxsmallRNA(i2) x>smallRNA(si3) xxxxxsmallRNA(fl3) xxx>smallRNA(si3) --TOE2(3) x>smallRNA(le3)                                 --------->YAB1 xxxsmallRNA(si3)                     <---------AHL20(2) xxsmallRNA(le3)                 <---------AHL20(2)                                              ---- x>smallRNA(l2)               --------->AHL20(2) <---------ICU4                                 <---- xxsmallRNA(si3)    --------->DAG2   --------->AHL20(2)                             --------->AHL20(2) >smallRNA(i2)     ---------->DOF2--------->AHL20(2)            <---------AHL20(2)  <---------AHL20(2) xxxxxxxxxxx>smallRNA(fl3)  >>>>>>>>>GATA-1  <---------AHL20(2) <---------YAB1  <---------AHL20(2) xxxxxxxxxxxxxxxxx>smallRNA(i2)  --------->AHL20(1)       <---------AHL20(2)   <---------YAB1   <<<<< xxxxxxxxxxx>smallRNA(si3)----------->GT1 <---------ICU4 --------->AHL20(2)   <---------AHL20(2)<<<<< xxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------AHL20(1)   <---------ANAC55(2)   <---------YAB1    -------   tgatcgttcggtagataaacaaaaagtatagataaaatatttaatatttattcattacataaaatttttattgagtttatttttatttatataaaacaat  18069500      --------->AHL20(2)                                 <---------AHL20(2)    --------->AHL20(1)                                  <---------AHL20(2)    --------->AHL20(2)                                  --------->AHL20(2)   --------->YAB1                                      <---------YAB1 --------->AHL20(2)                                  <--------HAHB4    ----------->GT1             <- ----->YAB1                                          --------->YAB1 --------->ATHB51               -- -----ATHB12                                        <---------YAB1  --------->YAB1                 <- <<<<ARR1                                  <---------ZAT18          -------->ATHB1                --- <<<<ARR2        --------->ICU4            --------->ZAT18    <-----------GT1          <---------AHL20(2) -->WOX13(1) <-----------HVH21     <---------YAB1<---------YAB1    <---------YAB1      <---------YAB1   cataaaaataatatgggtcatgtttttttcatccattactatttgttcactactattattaatttcactattattgtgaaatgtcgatttttattgctca  18069600  Previous    Next  AGI:  At5g44740.1    Description:  UMUC-like DNA repair family protein. similar to REV1 (Reversionless 1), damaged DNA binding / magnesium ion binding / nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT5G44750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41929.1); contains InterPro domain UMUC-like DNA-repair protein; (InterPro:IPR001126); contains InterPro domain DNA polymerase eta (InterPro:IPR017061) Range:  from: 18065011    to: 18069106    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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