Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <-----------GT1                                               --                                   <------------------------ANAC81                          ---------        <----------DOF2        <----------DOF2                                             <---------At4g35610  <---------ANAC58            <---------ANAC58                                   <---------YAB1 -----  <---------ANAC58            <---------ANAC58               <----------DOF2     <---------TOE2(3) <- >DOF2 <---------DAG2 <-----------HVH21              <----------DOF2       <---------TOE2(3)<--------   atttgcttcccttttgactaaaaatgtcaatggcttttgtttctcttctcttactcttttagtctttagagttttttgagattaatattggtgagatgtt  18059800         --------->ARR11(3)                                                                      <---  <---------DAG2                                                                                 <---  <----------DOF2                         --------->ARR14(2)                                    <---- -------->ID1                   <---------WOX13(1)                                           <------- >ARR11(3)                 --------->ANAC55(2)            <----------DOF2---------->DOF2<---------ARR11(3) ---------->AtSPL8         <---------ANAC55(2)  <----------DOF2       <---------WOX13(1)<---------GLK1(2) ----------GT1        <---------CCA1(2)   <---------ARR14(2)  <---------TOE2(3)         --------->ARR11(3) -ARR11(3) ------>ZmHOX2a(2) <---------YAB1   ------>ZmHOX2a(1)<-----------RAV1(1)<---------AHL20(2)   tgtacttttttgatctagtttttcttatctcgtgatagatttcaaatcctctttgtcagtctttgatgttggattgaaagtgaatttatagatttttacc  18059900                                             <------NtERF2                                           <<<<<<<<<<DREB1A                                           <<<<<<<<<<DREB1B                                           <---------DEAR3(1)                                           <<<<<<<<<<DREB1C                                 <--------                                          <---------ORA47(1)                                ---------                                          --------->RAP2.6(3)                            <------MYB83                                        <------MYB83                                     <------MYB46(1)                                        <------MYB46(1)                                 --------->MYB111(1)                                       <---------AtMYB61                                <---------MYB46(3)                                       --------->MYB111(2)                              --------->MYB59                                       --------->MYB46(2)                               <---------AtMYB61                                       --------->MYB59                                  --------->MYB46(2)                                       --------->MYB111(1)                              --------->MYB111(2)       <---------AHL20(2)              <---------MYB46(3)                              <--------P       --------->AHL20(2)             <---------MYB55(1)                               <---------MYB55(1) ------DAG2                    --------->ZAT14                                       <---------MYB46(3) -------DOF2                   <---------ZAT14             --------------->AtSPL8   --------->ALFIN1 -----DAG2      <---------TOE1(3)     <--------P          <---------YAB1            <---------AtMYB61 ----GT1        <---------TOE2(3)  --------->ALFIN1 <---------YAB1                <---------bZIP60(2)   ttttcgaatttaaatattaaggtgactaaatactgaagtggtaggtcggccattctaattctgagtactagttcaactattctgaggtggtaggtcgacc  18060000                                                                                 --------->GLK1(1)                                                                                --------->ARR14(2)                                                                             --------->ANAC58                                                                             --------->ANAC46                                                                             --------->ANAC58                               <---------ANAC58                             <---------LBD16                               <---------ANAC58                          <---------At5g28300                               <---------ANAC46                         <-----------GT1                             <-----------GT1                         <---------ICU4                        <---------ANAC55(2)                         <---------YAB1                        --------->ANAC55(2)                         ------>ZmHOX2a(1)                    <-----------HVH21                              <---------MYB59              <----                  <-------MYC2 <---------ANAC55(1)                ------>ZmHOX2a(2)             -----                  ------->MYC2 --------->ANAC55(2)               <------ZmHOX2a(2)    ---------------                  ------->MYC3 <---------ANAC55(2)              <---------ARR14(2)   <---------ANAC58 <---------YAB1   <-------MYC3--------->MYB52(2)                <---------ARR11(3)   <---------ANAC58 -ETT(2)         <---------ANAC58     <---------YAB1            --------->ARR14(2) <---------AHL20(2) >ETT(2)         <---------ANAC58  ---------->ID1              --------->GLK1(1)<---------ARR14(2)   attctaatactgaaatggaacgtgtcacttgttacttgttcttattgagaattgattttttacagggatcctaattaccacggatttacttgaatgagtt  18060100                                               ----------->HVH21                                             <---------REM1(1)          ------->MYC3                                           <------MYB83                 ------->MYC2                                           <------MYB46(1)              <-------MYC2                                          --------->MYB55(2)            ------->MYC4                                          --------->MYB111(2)           <-------PIF5                                          <---------DEAR3(1)            <-------MYC4                                          <---------MYB46(3)            <-------MYC3                                          --------->MYB46(2)            ------->PIF5                                          <---------AtMYB61            --------->O2                                          --------->MYB111(1)          <---------TGA1a                                         <---------MYB55(1)            <---------O2                                         ========================================MYC_MYB                                        <-------GAMYB                  --------->TGA1a                                        =========================================MYC_MYB                                       --------->ATHB12       ----------->TBP         --------->DAG2          ================================================bZIP_DOF  --------->WOX13(1)             ---------->DOF2<-----------GT1 <---------AHL20(2) -----ZAT14               ------>MYB83 <---------MYB46(3)   <-----------TBP                       *TSS ---->ZAT14      ---------->DOF2<---------AHL20(2)       --------->At4g35610                     ---- >AGL15 ---------->DOF2   ------>MYB46(1)<--------P      <---------At4g35610       <-------TEIL  ----   tagtccatcaaaaagttgaaaaagaaccaaatattaaaagatggttggtgtaacctgtctgcttatataatccacgtgtgaaaaatgcataaaactcaaa  18060200                                                              ---------->DOF2                                              --------------->AtSPL8         --------->ATHB12 ----------->RAV1(1)              <---------GLK1(2)   <----------DOF2       <-------TEIL ----->ANAC58                  <---------WOX13(1)     <---------DAG2 ---------->DOF2 ----->ANAC58          <---------GLK1(2) <----------DOF2  <-----------GT1<------ZmHOX2a(1)     ------   cgacaacattttgaaaacgatggcaaattcttgaatgattcttctttttatgttccctttttactaaagctaaaaggattcattagcaagtgtttgtgaa  18060300                                                                                                -----                                                                    <---------GLK1(2)          ------                                                                --------->LBD16                <-----                                                               <---------ANAC58               <------                                                               <---------ANAC46               <------                                                        <-----------ARR10                  <---------MYB52(1)                             <-------TEIL               --------->ARR11(3)                <-------GAMYB                   <---------ARR11(3)                   <---------ARR14(2)         --------->ANAC58                   --------->ARR11(3)                  <---------CCA1(2)           --------->ANAC58                  <------MYB46(1)             <-----------GT1  <---------ANAC58  <-----------RAV1(2)   ----------->GT1<------MYB83    --------->ATHB12  ===================================HOX2a_HOX2a ---->DOF2     <------ZmHOX2a(1) <---------ATHB12   <------ZmHOX2a(2)           ------>ZmHOX2a(1)   agggagagagaaatggaggaaggtctaaagattcaatctttggtcatttatccgatcaaatcttgccgtggaatctctgttcctcaggctaccgttactc  18060400                                                                                      <---------AHL20(2)  ----------->GT1                                                                     --------->AHL20(1) ---->YAB1                                                                            --------->AHL20(2) --------->AGL15                                                              <----------DOF2 ----------AGL15                <<<<<<<<<TBF1                                 ------>ZmHOX2a(1) -----------AGL1             <<<<<<<<<TBF1                            ---------->DOF2--------->AHL20(2) -----------AGL2          <<<<<<<<<TBF1    ------>ZmHOX2a(1)     ----------->GT1     <---------AHL20(2)   atactggtaaaaactaagaacaatcttcttcttcttcttctactcctcttagtttgacttctgagaattgaaaaaaggtccttttaaaaaaattggtatg  18060500                                                 --------->CCA1(2)                                                <---------ARR14(2)                  <---------YAB1                --------->ARR14(2)                 --------->KAN4(2)              --------->ARR11(1)                <---------ICU4                  --------->ARR11(3)               <---------YAB1                   <---------ARR11(3)         <----------DOF2                  --------->YAB1                                          ---        <---------DAG2                   <---------YAB1                                       -------   --------->ARR14(2)                 <---------YAB1                                         --------   <---------GLK1(2)               --------->GLK1(2)                                      --------->LBD16  <---------HSFB2a(1)             <---------ARR11(3)                                      <---------HSFB2a(2)  --------->HSFB2a(1)             --------->ARR11(3)                    ---------->DOF2   --------->HSFB2a(2)   agaaagattcccttttgatcattcttgattttctgagattttgattataagatatgggttttgtttgatttagggaaagtcaacaaattttccgagaaag  18060600                                                                                                  <--                                                                          <---------AtLEC2   <-------                              ----------->GT1       ---------->DOF2 <-----------RAV1(1)<---------GLK1(2)                       <---------YAB1       --------->ZAT18        <---------TOE2(3)   --------->ARR11(3) ------>ZAT18        <---------------AGL15  --------->ZAT14    <----------DOF2         <---------ARR11(3) -->DAG2             --------------->AGL15  <---------ZAT14    <---------DAG2        <---------TOE2(3) -->DOF2            <-----------------AGL2  <---------ZAT18 <---------ALFIN1   ------->TEIL<---------   tgaacaaattgtctcagaaattgctattaatagggtaaaatgagagtgaacacttaaagtctccacttttatgttggcatgaacatttagatttttcact  18060700  Previous    Next  AGI:  At5g44710.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO41922.1); contains InterPro domain Ribosomal protein S27, mitochondrial (InterPro:IPR013219) Range:  from: 18058137    to: 18059787    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g44720.1    Description:  molybdenum cofactor sulfurase family protein. similar to molybdenum cofactor sulfurase family protein [Arabidopsis thaliana] (TAIR:AT1G30910.1); similar to unknown [Populus trichocarpa] (GB:ABK95960.1); contains InterPro domain MOSC, N-terminal beta barrel (InterPro:IPR005303); contains InterPro domain Pyruvate kinase, beta-barrel-like (InterPro:IPR011037); contains InterPro domain Molybdenum cofactor sulphurase, C-terminal; (InterPro:IPR005302) Range:  from: 18060198    to: 18062723    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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