Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                      <---------At4g35610                      --------->At4g35610                    --------->bZIP60(1)                    <---------bZIP60(1)               --------->ALFIN1              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             ====================================bZIP_DOF             --------->O2             --------->TGA1a             <---------O2                         --------->ANAC46                                  <         <-----------HVH21                  --------->YAB1                                        ---         --------->TOE2(3)               --------->YAB1                                          <---       <---------TOE2(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                           ----------->GT1      --------->MYB52(1)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                         --------->AHL20(2)      <---------DOF5.7(2)             <----------DOF2 <---------ARR11(3)   <---------AHL20(2) <------      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------YAB1    --------->WOX13(1)     <---------AHL20(2) --ZmHOX2a(2)<---------TGA1a       ------>ZmHOX2a(1)  --------->GLK1(2)    --------->AHL20(2)--------   caaaagattaacgtcaagtgtgtcatcagacgaactcctacttttatgatacccataatctttcaatctgttccgatttaaaaattttaaatgtaattac  18057700                  --------->AHL20(2)               --------->YAB1                                                  ---------->DOF2   <---------ANAC46                                                           <---------AHL20(2) ---------WOX13(1)--------->YAB1                     <---------YAB1           --------->AHL20(2) ------>ATHB12<---------YAB1                         --------->ICU4       <---------AHL20(2) ------YAB1 --------->YAB1                          --------->TOE2(3)     --------->AHL20(2) -----GT1 <---------WOX13(1)                       --------->YAB1 <---------ANAC46            <------ ->ICU4<---------YAB1                  <-----------GT1--------->ATHB51   --------->ICU4      --------   tgattgtttgtaattgataataaaaaaaaactatttcatattttcaatttctaacattattgtttattgtttgtaattaataaaagaaaaaaacatttaa  18057800                                                        <---------AHL20(2)                                                        --------->AHL20(2)                                                  --------->YAB1                                                 <---------YAB1                                               --------->YAB1                                              <---------ATHB12                                             ------>MYB46(1)     <---------YAB1                                             ------>MYB83     --------->AHL20(2)                                            --------->MYB52(1)<---------AHL20(2)                                           --------->AtMYB61  <---------AHL20(1)   <-----------GT1                        --------->MYB46(3)  --------->AHL20(1)   --------->YAB1 ---AHL20(2)       <-----------GT1       -------->P<---------ARR11(3)           <----------DOF2 ->AHL20(2) <-----------GT1          --------->ZAT6--------->ARR11(3)     --------->AHL20(2)   tagtttttcatttttgacattatactttcttcaaatctaaaactaccaacgatgatatttatattttattaatccatttattctttgatattttcaaaaa  18057900                                            <---------AHL20(2)                                            ----------->TBP                                            --------->AHL20(2)                          <---------At5g28300                                        --------->AHL20(2)                             <-----------GT1                                       <---------AHL20(2)                          --------->AHL20(2)                     <---------YAB1 <---------AHL20(2)                             <---------AHL20(2)                   <-----------GT1  --------->AHL20(2)                             --------->AHL20(1)                <---------ICU4     --------->ICU4                                 --------->AHL20(2)            <---------YAB1         --------->AHL20(2)       --------->MYB52(1)    <---------AHL20(2)      <---------TOE2(3)       ----------->GT1   --------->AHL20(2)            ----------->TBP   tgtccattaatgttttcattgttactattactaagtaataaataatataaataaacactgacaaactgaagttacagactataaataatttaccatacta  18058000                                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   <---------ZAT18                                   --------->ZAT14                                   --------->ZAT18                                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                               xxxxxxxxxxxxxxxx>smallRNA(se3)                             <-------GAMYB                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            <------MYB83                            <------MYB46(1)                --------->YAB1 xxxxxxxxxxxxxxxx>smallRNA(i)               xxxxxxxxxxxxxxxxxxx>smallRNA(si3)               *TSSxxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               xxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <---------ARR11(3)               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       --------->ARR11(3)               xxxxxxxxxxxxxxxx>smallRNA(s)              <---------ARR14(3)               <----------              xxxxxxxxxxxxxxxx>smallRNA(s)              <------MYB46(1)                 <-----------GT1             <----------DOF2<---------MYB46(3)          <------MYB83           ---------->DOF2        ---------->DOF2   <---------MYB52(1)           <---------AtMYB61      --------->YAB1        <     --------->TOE2(3) <-----------RAV1(2)<---------MYB52(1)                 <---------ATHB12 ------>ZmHOX2a(1)   aatgtaacatcaaagctttcatagctcagttggttagagcacccgtttagtaagcgggaggtcttgagttcaactctcaatgaaagcatttttctccttc  18058100                                                                             --------->ANAC46           ------->TEIL              *TSS                                    --------->ANAC58    <---------YAB1           <---------DAG2                         <---------At5g28300    <---------AHL20(2)       <----------DOF2                       <-----------GT1 -GT1 <------------CBF  ---------->DOF2      <---------AHL20(2)<----------DOF2         ------>NtERF2 ----------DOF2 <---------ALFIN1   <----------DOF2          <-----------GT1  --------->ANAC58    ----   ttcttttttattgaacccataccctcgaaagctttttcttttgttattttttgaagtctatttctcttttcactgtctctcgcaatctccgactctctcc  18058200             <---------ATERF1(1)             <-----------HVH21             ------>NtERF2            --------->DEAR3(1)            <---------DEAR3(1)           <------NtERF2           --------->RAP2.3(1)           --------->ATERF1(1)          ------>NtERF2          <---------ATERF1(1)          <---------RAP2.3(1)                                               <---------YAB1         <---------DEAR3(1)       <---------MYB52(1)                       --------->TOE2(3)         --------->DEAR3(1)       <--------P                               --------->YAB1      <---------ANAC58           <---------MYB52(1)                 <---------ARR11(3)      <---------ANAC58 <----------DOF2         <-----------HVH21 ----------->RAV1(1)     <---------ANAC46 -->ZmHOX2a(1)<------NtERF2     <---------DEAR3(2)            --------->HSFB2a(2)        ----------->GT1   ttcttatttcgtcgccgtcgctactctttctcgtcggtaagttcccctctgtcatttccttcttctccaacatctaatcttattgtcgattgtgtaaatt  18058300                          --------->ANAC46                                                      <----                          --------->ANAC58                                                      <----                          --------->ANAC58                                              <---------CCA1(2)                    <---------LBD16                                       --------->MYB52(1)<--------                <---------AHL20(2)                           --------->AHL20(2)<---------ARR14(2)                <-----------GT1                              <---------AHL20(2)--------->ARR14(2)<---           <---------MYB52(1)                      ---------->DOF2     --------->YAB1 <---------CCA1(2)   gctatgttttccagttatttactcgggcacgaaacatgttcgatgaaatgtctcaaagagtatttttttagactcataacgaaactgcttatctctttgc  18058400                                                                                         ------>ZmHOX2a(2)                             --------->TOE2(3)                                         <---------ARR14(2)                             --------->TOE1(3)                                         --------->ARR14(2)                            ----------->GT1                                            <---------ARR11(3)                           <---------TOE1(3)                                        --------->HSFB2a(2)                           <---------TOE2(3)                                   <-------TEIL    <---------ANAC58  --------->ARR14(2)                                     <---------GLK1(2)    <---------ANAC58  <-----------ARR10                           --------->DAG2    <---------HSFB2a(2) -----ANAC58          <---------ARR14(2)          <----------DOF2---------->DOF2  ----------->RAV1(2) -----ANAC58       <---------ANAC58             <---------At4g35610          <---------ARR14(2) --DOF2            <---------ANAC58             --------->At4g35610    <-----------GT1 <---------AGP1 -------DOF2      <---------LBD16            <--------P   ----------->GT1    --------->ARR14(2)   ttttgttcgtgattttgtattgcggttctaacgttaatatgaactgggttagctttcaaattgtaaaaaaagtttaccagattcgtctggatctaatgct  18058500                                                         --------->ARR14(2)                                                      --------->ANAC46                                                      --------->ANAC58               <---------ZAT6                                                      --------->ANAC58         --------->MYB111(1)                                                    --------->MYB52(1)         <---------MYB46(3)                                                   <---------ARR14(2)          --------->MYB46(2)                                                  <------ZmHOX2a(1)            --------->MYB52(2)                                                <---------TOE2(3)            <---------MYB52(1)                               <----------DOF2  <---------TOE1(3)        --------->GLK1(2)  ------>ZmHOX2a(2)                --------->AHL20(2)         <---------ZAT6<---------ARR14(2) --------->TOE2(3)    ----   catgttttagttttggaataaaaaatgtccagtctttagaaactattgttaaggaaacggaacctagttttggagaatcgttagttagagttgatcgcat  18058600  Previous    Next  AGI:  At5g44705.1    Description:  pre-tRNA. tRNA-Thr (anticodon: AGT) Range:  from: 18058015    to: 18058088    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g44710.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO41922.1); contains InterPro domain Ribosomal protein S27, mitochondrial (InterPro:IPR013219) Range:  from: 18058137    to: 18059787    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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