Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ============================================MYC_MYB                                                        <-------GAMYB                                                       --------->MYB52(2)                                                <---------MYB52(1)                                               <-------GAMYB                                              <---------ANAC46           <-------GAMYB                      <---------ANAC58          <---------MYB46(3)                  <---------ANAC58      --------->HSFB2a(2)                 --------->KAN4(2)      <---------HSFB2a(2)                <---------HSFB2a(1)    --------->At4g35610                  <---------MYB46(3)    ----------->RAV1(2)                  --------->HSFB2a(1)   --------->GLK1(2)                     --------->KAN4(1) -------->ANAC58                    --------->LBD16    <---------MYB46(3)<---------TOE1(3)     <----- -------->ANAC58     --------->ARR14(2)  <---------KAN4(1)       --------->LBD16     <-------TEIL ---->ANAC58         <---------ARR14(2) <---------KAN4(2)<---------MYB52(1)--------->ATHB12    ------ ---->ANAC58 ----------->HVH21     <---------LBD16 <---------ANAC58      <---------TOE2(3)--------->TGA1a --->DOF2<---------AtMYB61        <---------LBD16  <---------ANAC58     <-----------GT1   <---------TGA1a   gcaagcatctggaggttgacgaggttcccaaacgtctccgggattgttccgttgagttcgttgtctccgagttttaacgatttgagattcacaagtgagc  18053700                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                          <---------PCF2                                                                                          --------->TCP20  --------->WRKY38(1)               ----------->ARR10                                     --------->TCP15(1)  ----------->HVH21             <---------HSFB2a(2)                                      ----------->HVH21  --------->WRKY12         <------MYB83--------->CCA1(2)                               --------->ALFIN1 ----At4g35610             <------MYB46(1)                    <------ZmHOX2a(1)  <---------MYB52(1) --->At4g35610            --------->MYB59 <-------TEIL <---------ATHB12        <---------MYB46(3)   cgagttgactcggtatatcgccactgagtaggttagagaagagatgcaacgattccaatgaagaggagaggttagagagagtcgttgggatgggaccgac  18053800                                       --------->DEAR3(2)                                     <-----------GT1                                 <-------GAMYB  <---------DEAR3(2)            --------->MYB111(2)                            <---------LBD16  <---------HSFC1(2)            ----------->GT1                           --------->TOE1(3)  <---------HSFB2a(1)           <---------MYB46(3)                        --------->TOE2(3)  --------->HSFC1(2)         <------MYB83            <------ZmHOX2a(1)    <---------MYB59 <---------AHL20(2) ->DREB2C(2)                 <------MYB46(1)   <------ZmHOX2a(2)         ----------------->AG --ETT(1)                   <---------TOE2(3)  =============HOX2a_HOX2a  ----------------->AGL1    -- >DEAR3(2)                  --------->MYB59--------->SPL7         ----------->GT1--------->LBD16  <--   aagacggttcgaagacaaatcgatgtggattaggttgttaaaccggccgatcgaaggagaaattgaaccggttaaacctaaaccggagagatttaaaccg  18053900                        <------NtERF2                        --------->ATERF1(1)                       ------>NtERF2                       <---------RAP2.3(1)                      <---------bZIP60(1)                      --------->bZIP60(1)                      <---------O2                      <---------bZIP60(2)                  <-------MYC3             --------->DEAR3(1)                                  <---------LBD16            --------->ANAC46                            --------->GLK1(1)          <---------ALFIN1<---------DEAR3(2)            <---------GLK1(1)          --------->AtMYB61                          --------->LBD16         --------->MYB46(3)                         --------->HSFB2a(2)    <-----------GT1----------->HVH21               <---------LBD16 ------->ATHB12   <-----------HVH21               --------->MYB52(1)                          <------ -------ATHB12    ------->MYC3        --------->At5g28300  ----------------->AGL1  <----------DOF2 --   atgatttcacgaccaccgcatgtgacgccggtccagttgcagtaactgggactaccggaattccaatctcggagaacgtcttcttcttttgggtttgtga  18054000                                               --------->LBD16                                             <---------LBD16                                          <---------WRKY18(1)                                         --------->WRKY45        <---------LBD16                                         ----------->HVH21     ------>MYB83                                 ------>ZmHOX2a(2)             -------->P                                <------ZmHOX2a(2)              ------>MYB46(1)                               <---------ARR11(3)             ------>MYB46(1)                               --------->ARR11(3)  <---------WRKY18(1)                               --------->ARR14(2) ----------->HVH21                               <---------ARR14(2) --------->WRKY12 --------->LBD16                               <---------ARR14(3) --------->WRKY38(1)                <---------HSFC1(1)       --------->WRKY12   --------->MYB46(3)                <---------HSFB2a(2)      --------->WRKY38(1)<---------MYB59     <---------ARR11(3)        <-----------ARR10<-------GAMYB ------>MYB83            ---------------     --------->ARR11(3)        --------->ARR14(3)<--------P--------->ANAC58       <------ZmHOX2a(1) ---YAB1        --------->HSFC1(1)     <----------DOF2     --------->ANAC58      ----------->GT1 -------->DOF2  --------->HSFB2a(2)<---------CCA1(2)      ------->TEIL        XXXXXXXXXXXXXXXXXXXX>MIR415   taaaagagttcttcagttcgagaagagtttgaagatcgtctctttgacccggttgacccgaacccaacccggatgagaaacagaggaaaaacagagcaag  18054100                                                       ------>ZmHOX2a(2)                                                      --------->CCA1(2)                                                      <------ZmHOX2a(2)                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                     --------->AGP1                                    <<<<<<<<<TBF1    <---------ARR11(3)                            <-                                   <---------------AGL15                                       <-----                                   --------------->AGL15                                       <-----                           <<<<<<<<<TBF1  --------->ANAC58                                   <-------                       <-----------GT1    --------->ANAC46                        --------->HSFC1(2)                    <------------------------ANAC81  --------->ARR11(3)           <---------HSFB2a(1)           <---------At4g35610   <<<<<<<<<TBF1      --------->GLK1(1)             --------->HSFB2a(1)           --------->At4g35610<<<<<<<<<TBF1         <---------GLK1(1)       ---------->DOF2  -------- --------->ANAC81  <---------AHL20(2)     --------->ANAC58         --------->ICU4 <---------HSFC1(2)   aagaacagagttttgctgcattttttttcttcttcttcttcttcaagaaacaagagatctgtgagagtaatagtgaatgaaagaagcttcttcgagttct  18054200                                                                                 --------->YAB1                                                                           <------MYB83     <---------ZAT6                                                        ----------->GT1 <---------ANAC58 --------AtMYB61                                                           <---------MYB46(3)   ----- ----ANAC58                                               <---------AtLEC2 <------MYB46(1) <---------AtLEC2 ----ANAC58                                        <------MYB46(1)      <------------CBF   <---------ANAC58 --ARR11(3)      <-----------RAV1(1)            <---------MYB52(1)     --------->ATHB12   <-------TEIL ->ARR11(3)     <---------TOE2(3) --------->GLK1(2)<------MYB83       <---------YAB1--------->MYB52(1)   tgtggtagtgagacgactaatgttggaaacatagagaatttaagacaactgtttggttttggatgaagtaagacgattggttataagaacggtgcatggg  18054300                         --------->ANAC46                      --------->ARR14(2)                                                            -                      <---------ARR14(2)                                                            <                   <---------ANAC46                                                       --------->DAG2               <---------ZAT14                                    <------ZmHOX2a(1)   ===============         ------->TEIL --------->ZAT14                       --------->MYB111(1)    <---------At4g35610        <---------CCA1(2)--------->ANAC55(2)               <--------P<------ZmHOX2a(1)<------ZmHOX2a(1) ---->ZAT18    --------->ZAT14                           ----------->GT1 ----------->GT1 ---------->DOF2   gactatctctgtatctctgttctgtatacgcgtctaagtatgtgtgtttgggtttgatgtggtaagtaggaggagaagtaaatgcagaggataaagtttt  18054400                                                                              <XXXXXXXXXXXXXXXXXXXXMIR847                                                                          --------->ATHB12                                                                       <----------DOF2                                                                      ------>ZmHOX2a(2)                                                                      =====================HOX2a_HOX2a                                                                    <---------ARR11(1)                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                                                                    <---------ARR14(2)         ---------->DOF2                           --------->ARR11(3)======================HOX2a_HOX2a      <----------DOF2                              <---------ARR11(3)<------ZmHOX2a(2)  ------>ZmHOX2a(2)  <---------------AGL15        <---------CCA1(2) --------->ARR14(2)           ---- -------->ARR14(2)  <-----------------AGL3    <---------AHL20(2)   <---------CCA1(2)            ----- ---------ARR14(2)<<<<<<<ZML2                 --------->AHL20(2)   <---------ARR14(1)        -------- ========HOX2a_HOX2a----------------->AGL3--------->AHL20(2)    <---------LBD16     <------ZmHOX2a(1)   gggatcggctataaaggctagaactatatatagagtgtttttttttatatatatatctcttctgttttcggatctttcattgagaaggagagtaatgaga  18054500                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                        --------->LBD16                                                                       <---------ANAC46                                                                       <---------RAP2.6(2)              ---------->DOF2                                          <---------ANAC58     >>>>>>>>>TBF1   <-----------HVH21                                 <---------ANAC58 -------------------->ANAC81                                          <---------LBD16 ----->DOF2  <---------WRKY12                                     <-----------RAV1(1) ->YAB1      <---------WRKY38(1)<<<<<<<<<<<<<<<<<LFY             <---------TOE2(3)                <--   aagagaagaagaaggtcaaagagggtcagagaagagacattggaaaatgcaattgcaagtgtccatttatgttgcggctatgccaatgtgtatttatgtt  18054600  Previous    Next  AGI:  At5g44700.1    Description:  EDA23 (embryo sac development arrest 23); ATP binding / protein serine/threonine kinase. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G20140.1); similar to hypothetical protein OsI_025193 [Oryza sativa (indica cultivar-group)] (GB:EAZ03961.1); similar to Leucine Rich Repeat family protein [Solanum demissum] (GB:AAT40539.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66148.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (Int Range:  from: 18050091    to: 18054121    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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