Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------ALFIN1                                          <-                            --------->AHL20(2)                                             <---------                            <---------AHL20(1)                                            <---------WOX13(1)                            --------->AHL20(1)                                          --------->ATHB12                  --------->ANAC55(2) --------->ATERF1(2)                               <---------MYB46(3)         <---------ANAC46   <---------AHL20(2)                                         <---------YAB1 ------>RAV1(1)  --------->MYB59      <---------ATERF1(2)                        <---------TOE2(3)--- ->LBD16 <---------ANAC58  --------->AHL20(2)     <---------ANAC58   <---------ZAT18   --------->ICU4 -RAP2.6(2)      <---------TOE2(3)   --------->DEAR3(2)        --------->GLK1(2)---------->DOF2   <-- >ANAC46 <---------ANAC58  <---------AHL20(2)     <---------ANAC58   --------->ZAT14 --------->MYB52(1)   acaaaattttggcttgttttaggtatcaaataaatttggaccggcactgtttgcgagcgtagaagaaactgttcacacatactaaagtaatggttgacaa  18020100                                                                                <---------At4g35610                                                                                --------->At4g35610                                                                           --------->ALFIN1                                                                          ------->MYC3                                                                          <-------MYC2                                                                          ------->MYC2              <---------TOE2(3)                                           <-------MYC3             <---------DOF5.7(2)                                  <---------ARR14(2) -----ZmHOX2a(2)                                                  --------->GLK1(2) -ARF1      --------->WRKY12                                     --------->GLK1(1) ------>ARR11(3)    --------->ANAC58                             <---------GLK1(1) -------ARR11(3)    --------->ANAC58                  --------->YAB1    ------->TEIL     <-------TEIL   gatcagtttcagagttgacgataagaaatcaactaggttaacaaaatgtaatgaaatcagaacatggaaatctgaacgtggcagataaatatacatattc  18020200                          --------->AtLEC2                        ---------->DOF2                        --------->GLK1(1)                       --------->ARR14(2)                                         ---------->DOF2                       <---------ARR14(2)                                        --------->YAB1                     ----------->ARR10                                        --------->YAB1                   --------->LBD16                                   ----------->GT1                 <---------LBD16                        <----------DOF2    --------->YAB1        ----          <---------MYB52(1)                         ------>NtERF2--------->GLK1(2)     --------->WOX13(1)   <----------DOF2<---------ANAC46                 <---------RAP2.6(2)   --------->AHL20(2)--------->AHL20(2)   aaactcttttctgttaatttgcgcagaaatgcaaattcaattgctaagcctatgcggcctttacaacgaatcagttaaaataatcaaagtaaatcaaata  18020300                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -              <---------ANAC58                                                                      -              <---------ANAC58                                            --------->AHL20(2)        <      <---------YAB1                                                     <---------YAB1             =    <---------ICU4                                                     <---------ICU4               -    -------->HAHB4                                   --------->YAB1    --------->YAB1               -    --------->YAB1                                --------->CCA1(2)   <---------ATHB12<---------ARR14(2)   <---------ATHB12                            <---------ZAT6     --------->AHL20(2)  --------->ARR14(2)   --------->ICU4                            ----------->GT1 ------>ZmHOX2a(1)        <---------ARR11(3)  <---------TOE2(3)                  <------ZmHOX2a(1)      --------->TOE2(3)         --------->ARR11(3) ----->GLK1(2)<---------ANAC46      ----------->GT1 <---------YAB1<---------AHL20(2)----------->ARR10   atctaatgatgatatatcgtgtttacaggtttatatggaggaaaatatagtgatatgataatcctcatttaaatcattatatagtgaagatactacttac  18020400          ------>ZmHOX2a(1)          --------->HSFB2a(2)   --------->ARR14(2)   <---------ARR14(2)                                                                 --------->AtMYB61 -------->ANAC58                                                                     --------->ANAC46 -------->ANAC46                                                                   <---------ALFIN1 ---------TGA1a                                 ----------->TBP                    --------->ANAC46 -------->TGA1a                  <---------------AtSPL8                           -------->P ---------ANAC55(2)              <---------------AtSPL3                           ------>MYB46(1) -------->ANAC58          <------------CBF<---------ARR14(2)                      ------>MYB83 -------->O2     xxxxxxxxxxxxxxxx>smallRNA(i) ------>ZmHOX2a(1)                   *TSS<---------ALFIN1 ---------O2   ------>ZmHOX2a(2) --------->ALFIN1 <---------AHL20(2)             ----------->RAV1(1) =============================bZIP_DOF    --------->GLK1(2)                     --------->AtMYB61 -------->ANAC55(1)     <---------YAB1    --------->ARR14(2)                    --------->MYB46(3) -------->ANAC55(2)<----------DOF2       <---------GLK1(2)                     --------->MYB46(3)   acacgtaacctcctcgatcgtcttttccgattgaagtggtacagaatcctatatatatgactaccttcttgcaagttttccaccaacaccacatctctct  18020500                                 --------->ANAC58                               ---------->DOF2                             <---------YAB1                             --------->ANAC58                                        ------>ZmHOX2a(1)                             --------->ANAC58                                    --------->ARR14(2)                             <---------ANAC55(2)                        <---------ANAC46                       <---------YAB1          <-----------GT1          <---------ANAC58                     <----------DOF2  --------->REM1(1)        ------>ZmHOX2a(1) <---------ARR14(2)                <------ZmHOX2a(1)--------->ANAC58      <-----------GT1  <---------ANAC58   ctatctatggaagcattaggaaactttgattacgaaagctacaccaattttacaaaattgccatcctcccaatggggtgatcagttcctcaagttttcca  18020600                                                                                 --------->MYB52(2)                                                                               <---------MYB52(1)                                                                              --------->TOE2(3)                                                                             --------->ANAC58                                                                             --------->ANAC58       <                                                                            <-------TEIL           --                                                                            <---------TOE1(2)      ==                                                                            ------->TEIL          <--                                                                            --------->SPL7        ===                                                                            <---------TOE2(2)    <---                                                   <---------ZAT18        --------->TOE2(2)      ----                                  <---------ARR11(3)                      --------->TOE1(2)      ----                                  --------->ARR11(3)                     --------->ANAC55(2)     <---                      <---------ARR11(3)          --------->AtLEC2       --------->ANAC46        <---                   --------->AHL20(2)          <---------ICU4           <---------------AtSPL3   ----                   <---------AHL20(2)<----------DOF2 ------->TEIL   ------>ZmHOX2a(1)           -----        <-----------HVH21<----------DOF2      <---------ATHB12      =================================   --------->ARR14(2) --------->ARR11(3)    --------->WOX13(1)     --------->TOE2(3)         --------   <---------ARR14(2)<---------CCA1(2)   <-----------GT1           <---------ANAC46         <--------   ttgctgattcggtgagcccatttatatctttccgactatcttttaacaatcaatgcacatttgtgtattccttatacgtacgttagatggctatataaag  18020700     <---------ANAC58     <---------ANAC58     <---------ANAC46 ----------DOF2 ---->ZmHOX2a(2) ============================HOX2a_HOX2a ----ZmHOX2a(2) ============================HOX2a_HOX2a ------ARR11(3) ----->ARR14(2)        <---------ARR11(3) ----->ARR11(3)        --------->ARR11(3) ------ARR14(2)        <---------ARR14(2)                                                <---------ANAC46 ------ARR14(3)        --------->ARR14(2)                                                <---------ANAC58 ----->ARR14(3)       <------ZmHOX2a(1)                                                  <---------ANAC58 ---->RVE1(1)       --------->LBD16                                                 <---------ANAC58 ====HOX2a_HOX2a   --------->HSFB2a(2)                                              <---------ANAC58 -->DOF2           <---------HSFB2a(2)---------->DOF2           ---------->DOF2  --------->ARR14(2) -AHL20(2)         <---------LBD16 ------>ZmHOX2a(1)     ---------->DOF2         <---------ARR14(2)   atctttgacttgtatcaacttccaggattttgatgtccttgaaagagagattgaagtactaaagcctaaagtaagagagaacatattcgtgtcgtcttcc  18020800                 ---------->DOF2           <---------HSFB2a(2)        --------->ANAC46                   --------->HSFB2a(2)    --------->YAB1   ---------->DOF2                        <---------LBD16        <---------YAB1 --------->GLK1(1)   acagacaaagacgcgatgaaaaagacaattctttctattcattttctggacagtcttggtctctcttatcattttgagaaggaaatcgaagagagcctaa  18020900                      --------->CCA1(2)          --------->ANAC46                     <---------ARR11(3)  <---------AHL20(2)               --------->CCA1(2)         --------->AHL20(2)        <---------HSFC1(1)               <---------AHL20(1)        --------->HSFC1(1)      --------->At4g35610        <---------HSFB2a(2)  <---------At4g35610 --------->ANAC58                      --------->At5g28300        --------->HSFB2a(2) ------>ZmHOX2a(2)    --------->ANAC58                      <-------GAMYB    <----------DOF2  --------->ARR14(2)  --------->AHL20(1)          --------->LBD16  ----------->GT1   <---------ANAC58  <---------ARR14(2) --------->AHL20(2)   <---------ALFIN1     <---------SPL7   <---------ANAC58  --------->ARR11(3) <---------AHL20(2)--------->ANAC46     <------ZmHOX2a(1)   aacatgctttcgagaagatagaagatttgatcgctgatgaaaataaattgcacacaatctccaccatcttccgagttttcaggacatacggttactacat  18021000  Previous    Next  AGI:  At5g44630.1    Description:  terpene synthase/cyclase family protein. similar to ATTPS12/TPS12 (TERPENOID SYNTHASE12), cyclase [Arabidopsis thaliana] (TAIR:AT4G13280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83470.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930); contains InterPro domain Terpene synthase, metal-binding; (InterPro:IPR005630); contains InterPro domain Terpenoid synthase (InterPro:IPR008949); contains InterPro domain Terpene synthase-like; (InterPro:IPR001906) Range:  from: 18020482    to: 18022843    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version