Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                             <-------                                                         --------->ARR14(2)                <---------AHL20(2)                                                   <-----------GT1                        --------->AHL20(2)                                                  --------->KAN4(2)                <------ZmHOX2a(1)     --------->MYB52(1)  <----------DOF2         <---------ICU4                  --------->ANAC58  --------->YAB1  <---------YAB1                --------->ICU4                   --------->ANAC58 ------->GT1   <----------DOF2                  <---------YAB1                 <---------AtLEC2    <-   agtaacataacagcgttcttttgaatgctttctatatagtgatgttgttcattattccctatcccaaaaaaaaacttatatgcaaggacttatttaatgt  18001400                                                                                                -----                                                                                                -----                                                                                                -----                                                                                             <------ZmHOX2a(2)                                        --------->TOE2(3) ------>ZmHOX2a(2)                  ========                                        ------->GAMYB   <---------ARR14(2)            <---------ANAC58   <-----------GT1                      --------->YAB1  --------->ARR11(3)            <---------ANAC58   <---------AHL20(2)                  --------->MYB46(3)<------ZmHOX2a(2)     --------->ARR11(3)  -- --TOE1(3)                    <-----------GT1           --------->ARR14(2) ---------->DOF2  <-------- --TOE2(3)                <---------AHL20(2)  --------->YAB1------>ZmHOX2a(1) --------->YAB1--------- --------YAB1          <---------AHL20(1)    --------->AHL20(2)       ------->TEIL    <---------ANAC46   tatatttacatttgtttagctatagtatatttttacattcaaccaaaataaaaattcggatcctgatatatgaacttcaaagatagtggcttaagatcac  18001500                                                              ------>ZmHOX2a(1)                                                          <---------ARR14(2)                                                          --------->ARR11(3)                                                    ------>ZmHOX2a(2)                                                   ==================HOX2a_HOX2a                                                   --------->At4g35610                                                 <---------CCA1(2)                                     <-----------GT1=================HOX2a_HOX2a                                --------->ICU4   <---------ARR14(1)        <-------TEIL            --------->AHL20(1) <------ZmHOX2a(2) --------->TOE1(2)              <---------AHL20(1)--------->ARR14(2) --------->TOE2(3)              <---------ARR11(3)<---------ARR14(2) ---->ANAC46                    --------->ARR11(3)<---------AGP1 ---->ANAC58                --------->YAB1     ------>ZmHOX2a(2) ---->ANAC58               <---------YAB1      ======================HOX2a_HOX2a           --------->ANAC58 ===========================HOX2a_HOX2a --------->TOE2(3) --------->GLK1(2)     <---------------AGL15 ----->TEIL          =====================================HOX2a_HOX2a           --------------->AGL15 -ARR11(3)           =================================HOX2a_HOX2a      <---------AHL20(2)  --------->ANAC58 >ARR11(3)           <------ZmHOX2a(1)  --------->TOE1(3) --------->ARR14(2) <-----------GT1      ---   gaacctcagattcaaatttgtaaggagctatgaaaatattaaccttagatcggatctgaaaatcctgaactattttatgtcaccatacttagtaagaaac  18001600                                                        <---------YAB1                                         --------->ANAC58                                     <------               ------->GAMYB             --------->ANAC55(2)                                -------->HAHB4              <---------MYB52(2)         --------->ANAC55(1)                                <--------              --------->MYB46(3)         --------->ANAC46                                  --------->ICU4           <----------ID1                <---------ANAC55(2)                          ----------->GT1         <-----------GT1      <---------TOE2(3)  <----------DOF2         <---------WRKY12  <---------YAB1     --------->WOX13(1)  <------ZmHOX2a(1)    --------->ICU4             <---------WRKY38(1)--------- ------>MYB52(1)     ---------->DOF2     --------->ANAC58    <----------ID1       ---------->DOF2   taatggtcaattaacaacaaactaaaaggattaatatttgtatacgtaattctttgtttttataagacaagagggtcaacttgttaaagggtaatgatca  18001700                                                                                              <------                                                                                --------->KAN4(2)                                                                               --------->HSFC1(2)                                                                               <---------HSFC1(2)                                                                               <---------HSFB2a(1)                                                      <---------AtMYB61        --------->HSFB2a(1)     --------->ATHB12                             <------------------------ANAC81    --------->ANAC46     -------->ATHB1                              <------MYB46(1)               <---------KAN4(1)     --------->ATHB51                           <---------TOE2(3)              --------->KAN4(1)   --    <---------YAB1                              --------->MYB59          <---------LBD16   <-------PIF5 --------->ICU4                             <--------HAHB4              <---------ANAC46   ------->PIF5 ---YAB1                         <---------WRKY12<------MYB83           <---------ANAC58  ----------- -ICU4                       --------->DAG2<---------YAB1               <---------ANAC58<---------ALFIN1 >YAB1                      ---------->DOF2--------->ICU4  --------->MYB52(2) <---------KAN4(2)    <-   gtgagtattattgactagtgaagaaaactaaaaagtcaacttggtattattaggttttggtttgtttcattttttcgtggaacgttccctccacctgcat  18001800                                           --------->CCA1(2)                                       --------->HSFB2a(2)                                       <---------HSFB2a(2)                                     ================================HOX2a_HOX2a        <---------YAB1               <------ZmHOX2a(2)     --------->ICU4                 <---------ARR11(3) ---AtLEC2                          --------->ARR11(3)                   --------->WRKY18(1) ----->TEIL                     ---------->DOF2                         <-----------HVH21 >RAV1(2)                  --------->AHL20(2)                 ------>ZmHOX2a(1)  <---------YAB1    -- ------TEIL          <---------HSFB2a(2)   *TSS              --------->TOE2(3)<---------ARR11(3)   --   gtacataaatatgagtctaaactcgagaaaaaaataaagatcgagaaatgagaaatacaatttcctcaaaaatgggtcaagttctaattgtgcttcttct  18001900                 <---------SPL1(2)                <---------ANAC58               ----------------->AGL1               --------------->AtSPL3           ------>ZmHOX2a(1)           <----------DOF2  <---------ZAT2                                                  <-------TEIL       --------->ORA47(1)   --------->At4g35610                       <---------YAB1   --------->YAB1      --------->DEAR3(1)    <---------At4g35610              -------->P             --------->YAB1     --------->DEAR3(2) <-----------HVH21                    --------->MYB52(1)<---------ARR14(2)   <---------ALFIN1--------->SPL7                         <---------MYB52(2)   --------->ARR14(2)  --------->ZAT14<---------SPL7            <---------WRKY38(1)   <---------MYB52(1)<-------TEIL  <---------ZAT14<---------RAP2.6(3)       <---------WRKY12 --------->MYB52(1) <---------ARR11(3)  <- ---->ZmHOX2a(1)<---------ANAC58          --------->WRKY18(1)======================================== ------->At4g35610--------->SPL1(1)  <---------LBD16    ------>ZmHOX2a(1)     <---------CCA1(2)------   cctctgcaccgtcctttgccgtaccgagtcagctcttccttcgggtcaacattcagtcctactaaccggtttgtgattccatatattcataatattcatg  18002000                                 <-------TEIL             <---------AHL20(2) --------->CCA1(2)             --------->ATHB12   <------ZmHOX2a(2)            --------->AHL20(2) --------->ARR11(3)                              ------->TEIL  <-------MYC3                 <---------ARR11(3)                  --------->AHL20(2)  ------->MYC3                 --------->AGP1                      <---------AHL20(2) <---------TGA1a               --------->ARR14(2)                --------->AHL20(2) --------->TGA1a         --------->YAB1                         <---------ARR11(3) --------ALFIN1        <---------WOX13(1)--------->YAB1         <---------AHL20(1)       ----------->GT1 ==========MYC_MYB   --------->ATHB12  ------->TEIL             --------->ARR11(3)   <------ZmHOX2a(1) --->AtLEC2 --------->ICU4     <---------ARR14(2)     <---------AHL20(2)  <------ZmHOX2a(1)   cacacgtttgtatatttattagttgattgataagatccatgaatcatatggtctaattacatggaatatatatataggatgtatttaggacttgttaaaa  18002100                                <---------GLK1(2)                               <------MYB83                               <------MYB46(1)                              <---------TOE2(3)                              --------->MYB59                          <---------ICU4                                                          ---                         <---------YAB1                                                           ---                         --------->ICU4                                                    ------>MYB83                       --------->YAB1                                                      ------>MYB46(1)                      <---------YAB1                                     <-------TEIL     --------->WOX13(1)                   --------->ICU4                              --------->TOE2(3)       ------->TEIL                  <---------ANAC58              ---------->DOF2<---------MYB59     <---------------AtSPL3   ---------->DOF2<---------ANAC58     <---------------AGL15   --------->TOE1(3) <-------TEIL    <---   cattttaaagctgtatttgtgcttatgataattaggttctcacatatatagaaagttagagaaaacctaaactgatacatgagtacatgtaccaatccat  18002200          --------->ANAC55(2)          <---------ANAC58          <---------ANAC58          <---------ANAC46--------->TOE1(2)          <---------ANAC55(2)          <---------ANAC55(1)                                       <------MYB83     --------->MYB52(2)   --------->TOE2(2)     <----------DOF2    --------->MYB59  --------->TOE2(3)--------->AHL20(2)     <---------ICU4   <----------DOF2 ------>YAB1       --------->YAB1      --------->YAB1      <---------DAG2         <-------TEIL ------>ATHB12  --------->WOX13(1)    <---------YAB1  --------->YAB1<------MYB46(1)        <---------AHL20(2) ------ATHB12<---------ARR11(1)   ----------->GT1  --------->YAB1  --------->MYB46(2)    <---------AHL20(2)   tcattgttaattgcgtatcaattaaaaacctatgaactgtataatagttactttcataatactttttgtttggtatgaaacatatacatatataaaaatt  18002300  Previous    Next  AGI:  At5g44585.1    Description:  unknown protein Range:  from: 18001843    to: 18002700    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version