Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ---------->ID1                    ------->TEIL            <-------TEIL                 --------->ANAC55(2)      <---------ARR14(2)                             <---------DAG2           --------->AHL20(1)   <---------TOE2(3)                                        --------->TOE2(3)           <---------AHL20(1)   <---------TOE1(3)                                        --------->TOE1(3)           --------->AHL20(2)  ---------->DOF2            ---------->DOF2           <---------DAG2  ----------->GT1<---------ANAC55(2)      --------->ARR14(2)      ---------->DOF2   --------->AtMYB61   tgtgtgtttaaaatataatatgtattttgttgttaaagtttacatatacgttttagtctgtaaagctctaaagcatgtactagacaccttaccttatacg  17997700                               <---------AHL20(2)                           <---------AHL20(2)                          --------->AHL20(2)                          <---------ARR11(3)            --------->CCA1(2)                          --------->ARR11(3)           --------->ARR11(1)                          <---------AHL20(2)           --------->ARR11(3)                          <---------AHL20(1)           <---------ARR14(2)                          --------->AHL20(1)         ----------->ARR10                       --------->AHL20(2)    --------->YAB1                       --------->YAB1   --------->AHL20(2)                  --------->ANAC58      <---------AHL20(2)                                         --                  --------->ANAC58     --------->YAB1<---------TOE2(3)        ----------->GT1      --     <----------DOF2--------->YAB1    <---------YAB1 <---------YAB1 <---------At4g35610            ==   ttttagacttttagtataccacgaataatatatttaagttattaaaatcaaaattaagatttggaatttcagataatatttggaaaatatcaaactggtt  17997800        <------ZmHOX2a(2)        =====================HOX2a_HOX2a       <---------ARR11(3)       --------->ARR11(3)   ==========================HOX2a_HOX2a   <------ZmHOX2a(2)              <---------ICU4  <---------ARR11(3)        <----------DOF2                       --------->YAB1  <---------AGP1      ------>ZmHOX2a(1)                  <---------YAB1                     --------- ---->ZmHOX2a(1)  <---------ARR14(2)                   --------->YAB1            <---------WRKY12 ------->HSFB2a(2)--------->ARR14(2)<---------------------WRI1 --------->WOX13(1)<---------WRKY38(1) ==============HOX2a_HOX2a  <---------DAG2            --------->ICU4          ----------->GT1     <--   cctagatcagatcatatcaagttcctgatactttattcatggctacgttctaagaaattataagtcaatgagaaacaagagggtcaattgtttttcataa  17997900                                                                                              -------                         <---------ANAC58                                                    <-------         <---------AHL20(2)                                                                  <-------        <---------AHL20(1)                                        <----------DOF2            --------        <---------AHL20(2)                             --------->AHL20(2)                    <-------        --------->AHL20(1)              --------->AHL20(2)        <---------DAG2             --------        --------->AHL20(2)              <---------AHL20(2)     <-----------GT1               -------- >YAB1 --------->AHL20(2)<---------ANAC58              <---------AHL20(2)                   <-------- -------GLK1(2) ---------->DOF2        --------->AHL20(2)    --------->YAB1      <-----------GT1   --   gattatcaaattaattttaaaagagttgagtactggagaaaattaatacatttgcatttaaaattatactttttgtttgggttttacttcttggaacgtt  17998000      <---------ICU4     <---------ATHB12     <---------YAB1 -->KAN4(2)                                          --------->YAB1 --HSFC1(2)                                         <---------AHL20(2) --KAN4(1)                                      <---------AHL20(2)            ---------->DOF2 ->HSFB2a(1)                                    --------->AHL20(2)        ---------->DOF2   --------- --HSFB2a(1)                                  ----------->TBP          ------------------------>ANAC81 ->KAN4(1)              <---------ICU4      <-----------TBP           ---------->DOF2    --------->CCA1(2) ->HSFC1(2)            <---------YAB1 <---------ANAC58             <---------TOE2(3)     *TSS    ---- -KAN4(2)            --------->YAB1   <---------ANAC46             ------------------------>ANAC81 ---->ZmHOX2a(1)   <-----------TBP    <---------ANAC58           ---------->DOF2    ---------->DOF2--   cctctccatgattccatccgaatttataattccctcccattcgtgtatatataaataatagtcgcagtaaaggaaagaaagaaagaaaaagagatggaaa  17998100                                                     ------->TEIL        <-----------ARR10                                                    <-----------GT1      <---------ARR14(2)                                                    ---------->ID1       --------->GLK1(2)                                                 --------------->AtSPL8  <---------ARR11(1)                                                --------------------->WRI1--------->HSFB2a(1)                                                <----------DOF2          --------->ARR14(2)                       <---------AHL20(2)  <---------At4g35610           ------->TEIL    <---------DAG2    --------->AHL20(2)  <-----------RAV1(1)      --------->MYB52(1)    <----------DOF2   <---------AHL20(2) ----------------------->TaNAC69(2) -->GT1         <---------ARR11(3)     <----------DOF2         ------>NtERF2 ----->AHL20(2) --------->GLK1(2)     <---------ANAC58  <----------DOF2 <---------ARR14(1)      <---- ------->YAB1   --------->ARR11(3)    <---------ANAC58 <---------DAG2   <---------GLK1(2)       -----   ataatactttttcttcaaaatctattaatttgctcatattgcttttgctgctttgtacctttctctgccaaaccgaatctgcccttccctctcaccaaga  17998200            <--------P                 ----------->RAV1(1)          <---------MYB46(3)--------->AHL20(2)                       ----------->GT1    <-------TEIL      --------->ATHB12      --------->YAB1               --------->DAG2          ----------->GT1 -----ARR11(3)              <---------AHL20(2)           <---------TOE2(3)   --------->ATHB12 ---->ARR11(3)  <---------ZAT6      --------->TOE2(3)    <---------TOE1(3) <---------WOX13(1)    ----   acttgtaatcactggttagtgttttgacaattatataacatcaacatatgtgtatatataaggttgtcaaggtgttaattgatgggaaaattcatgaaat  17998300                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                     <---------At5g28300                                                                               --------->MYB46(3)<---                             <------ZmHOX2a(1)                                -------->P  <---------MYB46(3)                      <------ZmHOX2a(1)   --------->YAB1                     --------->WOX13(1)<-----               <---------AHL20(2)        <---------YAB1                     --------->MYB46(3)<------NtERF2               --------->AHL20(2)   ----------->GT1             <------ZmHOX2a(1)  ----------->HVH21 ------->GT1------->TEIL  <------ZmHOX2a(1)           <---------ICU4     --------->YAB1  --------->ALFIN1   agtatattcacatgtatatatataggaaggaggatgatgagttattataagcctaatactgacataggaacaccatcatcaaccagtgaccgtggtggcg  17998400 --------MYB46(3) ------>ALFIN1 -------AtMYB61 ---NtERF2 -----MYB46(3) ----DEAR3(1) ----ANAC58 ----ANAC46 ----RAP2.6(2) ----ANAC58 ----DEAR4(1)                                                        ---------->DOF2 ---ABI4(1)                                                  <---------DAG2 -->ATERF1(1)                                                <----------DOF2                        < --ERF1                                                   --------->ZAT6                           <- >ALFIN1--------------->AtSPL8                         <-----------GT1--------------->AtSPL8      --- -DEAR3(1)          <----------DOF2                <----------DOF2<---------HSFB2a(2)         <------ ----GAMYB        ------>ZmHOX2a(1)      <-----------GT1<-----------GT1     --------->ICU4--------->AHL20(2) ----DREB2C(2)<---------ALFIN1 <-----------GT1 <----------DOF2    --------->HSFB2a(2)    <---------AHL20(2)   gtggtaatggtatgtccctcctcttttcttattttacaatttttatcaactttctttttaacacttttctacaaagtacttattcatctaaataatatgt  17998500                                                               --------->ATHB12                                                             <---------WOX13(1)                                                      <--------P                                                    <------MYB46(1)<---------AHL20(2)                                                    <------MYB83  <---------AHL20(2)                                                   --------->MYB46(2)                                              <---------AHL20(2) <---------WOX13(1)                                         <---------DAG2 <------MYB46(1)   --------->REM1(2)                --------->At4g35610<---------DEAR3(1)                           <  --------->ALFIN1              <---------ICU4<---------YAB1<-------GAMYB            --------->YAB1-- ---------ANAC46                --------->ATHB12   --------->MYB59--------->AHL20(2)<---------YAB1 <- -----NtERF2                  <---------TOE2(3)    --------->MYB111(1) <---------AHL20(2)          <- --->NtERF2                <---------YAB1<----------DOF2<------MYB83   <-----------GT1 <---------CCA1(2) -----RAV1(1)     <-----------GT1   <---------At4g35610--------->MYB46(2) <----------DOF2          --   cgccgtgttgaaattagatgttactctctattaatgtttgctgctttttttattaggtaggcgattgattaatttacttttaagtcatcatatcgttcaa  17998600  Previous    Next  AGI:  At5g44580.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G44582.1) Range:  from: 17996538    to: 17997638    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g44582.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G44580.1) Range:  from: 17998089    to: 17999034    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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