Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <------ZmHOX2a(1)                                    --------->ALFIN1                                   <------ZmHOX2a(1)    --------->ANAC58                                   xxxxxxxxxxxxxxxx>smallRNA(se3)               --------->ALFIN1  --------->ALFIN1       --------->ANAC55(2)             <------MYB83  --------->ALFIN1 <------ZmHOX2a(1)             <------MYB46(1)    xxxxxxxxxxxxxxxx>smallRNA(se3)     <---------ARR14(2)  <---------ZAT2--------->ALFIN1 <---------ANAC55(2)    <---------ANAC58     --------->ARR14(2)  <---------ANAC46 --------->ALFIN1         --------->ANAC58    <------ZmHOX2a(1)   --------->ALFIN1 <------ZmHOX2a(1)         --------->ANAC58    --------->ZAT6 ---------ARR14(2) <---------DEAR3(1) <------ZmHOX2a(1) --------->ANAC58       <---------ANAC58 --NtERF2   <---------AtMYB61   <------ZmHOX2a(1)    <------ZmHOX2a(1)         <---------ANAC46 <----   catataggatttgggaggtcgagggcgaggtggaggaggaggaggaggaggaagaggaacgtaatccaagcgcaatttgttccctgttaacaataaatgt  17987500                                                                                                   <x                                                                                                  <xx                                                                                                  <xx                                                                                                  <xx                                                                                                 <xxx                                                                                                 <xxx                                                                                          --------->AHL20(2)                                                                          <-----------------AGL1 <xxx                                                                     <-------MYC3        <---------AHL20(2)                                                                  ------->GAMYB         --------->AHL20(2)                                                              <---------ATHB12   <---------HSFB2a(2)                        ------->TEIL                 ---------->DOF2 ------->MYC3--------->HSFB2a(2) -----YAB1    ------->TEIL <---------AtLEC2     ----------->GT1--------->YAB1   <---------LBD16 <xxxx   gattacaagttcaatgtatcaatatgtatgcatgaaatcgccagttatattggtgaaaagtccaataaccacatggtccgtctctggaaatttaaaatac  17987600                                                   <---------DEAR3(2)                                                   <---------MYB46(3)                                                  <---------TOE1(2)                                                 --------->ATERF1(1)                                                 <------NtERF2                                               <---------DEAR3(1)                                               --------->ETT(2)                                              xxxxxxxxxxxxxxxx>smallRNA(s)                                              --------->ATERF1(1)                                             xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                             xxxxxxxxxxxxxxxx>smallRNA(s)                     ---------->DOF2         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  ----------->GT1          xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxsmallRNA(i)             xxxxxxxxxxxxxxxx>smallRNA(s) <xxxxxxxxxxxxxxxxsmallRNA(s)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------DEAR3(1)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------LBD16          <---------At4g35610           xxxxxxxxxxxxxxxx>smallRNA(s)          --------->At4g35610           <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         xxxxxxxxxxxxxxxx>smallRNA(s)   xxxxxxxxxxxxxxxx>smallRNA(i)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(i)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <-----------HVH21    --------->AHL20(2)       <---------MYB52(1)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s)       --------->DOF5.7(2)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxsmallRNA(i)      <xxxxxxxxxxxxxxxxsmallRNA(i)  <xxxxxxxxxxxxxxxxsmallRNA(i)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------HSFC1(2)          <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)    --------->HSFC1(2)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)  xxxxxxxxxxxxxxxx>smallRNA(i)--------->AHL20(2) xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxsmallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           ---------->DOF2 xxxxxxxxxxxxxxxxxxsmallRNA(i2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->MYB52(1)----------->GT1   caccaagtcgttagctcaattggtaaagactctatgcgaagcttagaggtcgccggttcgagcgaatttaaaataccagtatgaacaaaaggagttaaac  17987700                                                                                           -------->HAHB4                                                                                          --------->ICU4                                                                                          <---------YAB1                                                                                        --------->YAB1                                                                                      --------->AHL20(2)                                           <-------TEIL                        <------NtERF2                              --------->CCA1(2)                               ------>NtERF2<--------ATHB1                              --------->GLK1(1)                              <---------bZIP60(1)                             --------->ARR14(2)                              <---------RAP2.6(2)                             <---------ARR14(2)                              --------->bZIP60(1)                   --------->AHL20(2)     --------->CCA1(2)                  --------->ATERF1(2)<----                   <---------AHL20(2)  <---------TOE2(3)                 <-----------HVH21<---------ATHB51              --------->TOE2(3)  --------->ZAT18                        --------->ANAC55(2)--------->YAB1              <---------DAG2 --------->ARR11(1)              <---------YAB1  <---------ATERF1(2)<----            -------->P       --------->ARR11(3)         <---------ARR11(3)  --------->RAP2.6(3) <----           <-----------GT1   <---------ARR11(3)   <------ZmHOX2a(1)     <---------ANAC55(2)--------->ATHB51    --------------->AtSPL3<---------------------WRI1    --------->ARR11(3)----------->HVH21<---------ICU4   ttggaatcggtactaacctttttaaatagaagatatgcactaagatacaagaggagaaggtctataattcaaatatgtgacggcagaaaataataattgt  17987800                                                     <---------ANAC46                                   --------->At4g35610        <---------MYB52(1)         <---------At4g35610       <-------GAMYB     <---------ANAC58            <---------AtLEC2                     ---------->DOF2 -----ANAC58             <---------ANAC58           <---------ZAT2                    ---------->DOF2 -----ANAC46            ---------->ID1              --------->ZAT2                ------->TEIL------- -----ANAC58--------->ZAT6<----------DOF2   <-----------GT1     <-------TEIL   --------->ANAC46 -----   gtgtgtgtctgttatctctatagtttggcttcttggcaactcagtttttctctctgcttggatatatacataaatgtctctacgaaccaaaagaaagaga  17987900                                                                                       <----------DOF2                                                                                      <---------ANAC58                      ----------->GT1                                             --------->At4g35610                     --------->CCA1(2)                                            <---------At4g35610        --------->ANAC58                                                         <-----------RAV1(1)        --------->ANAC58                                                      --------->ARR14(2)   <----------ID1   *TSS                                            <---------ANAC58  <---------ANAC58 ---->GT1       ---------->DOF2  --------->ALFIN1                   <---------ANAC58 <---------At4g35610 ------>GT1 ---------->DOF2 ---------->DOF2                 --------->TOE2(3) <---------ARR14(2)   gaaaaacaacaagtaaaagaaagatagagaaaaagatggggaagaagtgttcttcaaaatttcgtcaaatgcttgttttggttctgctgcttatcgtctt  17988000                                                                                   --------->ANAC55(2)                                                                               --------->CCA1(2)                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                                                                         <---------ANAC46                  ------>NtERF2                                          <---------ANAC55(2)              <------------MYB.PH3(1)                                    --------->ANAC55(2)             --------->RAP2.6(3)                                         <---------ANAC58            <---------ARR14(2)      <---------MYB52(1)                   <---------ANAC58            --------->ARR14(2)     <---------MYB52(1)              <---------AHL20(2)    <-----------GT1            --------->MYB52(1) --------->MYB52(1)<-----------GT1   --------->AHL20(2)<---------AHL20(2)         <---------ANAC58      <---------DOF5.7(2)                --------->AHL20(2) --------->AHL20(2)         <---------ANAC58      <---------At5g28300        --------->ANAC55(1) <---------ARR14(2)    --------->TOE2(3)    <---------YAB1       <----------DOF2   --------->TOE2(3)  --------->TOE2(3)    <----------DOF2----------------->AGL3  <-----------GT1--------->ANAC46    --------->ARR14(2)   cacttgccttagcgtaacggctccattatcagttaccggtttgttttacttttacaatacacataacataaaattacgtagatatacttaattacatttt  17988100                                                                                      ------>MYB83                                                                                      -------->P                                                                                      ------>MYB46(1)                                     --------->AtLEC2                               --------->TOE2(2)                      <---------AHL20(2)                                    --------->ANAC58          <-----------GT1         <-------TEIL                              --------->ANAC58      --------->AHL20(1)       <------MYB46(1)                             ------->GAMYB      <---------ARR11(3)       <------MYB83          --------->ZAT2       --------->MYB46(3)    <----      --------->AHL20(2)      --------->MYB59        ----------->RAV1(2) -------->P --------->TOE1(2)      <---------AHL20(1)---------->DOF2              <---------ZAT2  <---------ARR11(3)        ------   --------->YAB1     --------->AHL20(2)             --------->At4g35610--------->WOX13(1) <---------ZAT6   ttcaacaatattttacaaatgaaattaaaagtttggttcatacaaactaaaactcacctggacgaattcaatatcaaccagcaaaacctactagttttaa  17988200         --------->ANAC58                                                  ----------->GT1         --------->ANAC58                                                  --------->REM1(2)         --------->ANAC46                                                 --------->ALFIN1        ------->MYC2                                                    <---------ANAC58        ------->PIF5                                        --------->GLK1(2)        <-------PIF5                                        <---------ARR11(3)        <---------LBD16                                     --------->ARR11(3)        <-------MYC3                         --------------->AGL15      <---------ANAC58        <-------MYC2                         <---------------AGL15<---------HSFB2a(2)        ------->MYC3                        ----------------->AGL2--------->HSFB2a(2) ---------->DOF2                        <---------ALFIN1   --------->RVE1(1) -----TOE2(3)                 --------->ANAC58             --------->CCA1(1)         <-----------GT1 ---->DOF2--------->LBD16     --------->ANAC58      ----------->GT1     <---------ANAC46    ---------   agtaaaagcacgcggaatagaagacgagggacaagaacgaacacactccctaaatagcaaaaaatcttcaagaagcgtggagaaaactcaccattcagaa  17988300                                                                        <---------AHL20(2)                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                      <---------YAB1                                                                    <--------HAHB4                                                                    <---------AHL20(2)                                                                    -------->ATHB1                                                                    -------->HAHB4                                                                    --------->ATHB51                                                                    --------->YAB1                                                                    <---------ICU4                                                                   --------->ICU4                                                                --------->AHL20(2)                                                                <---------AHL20(2)                                                                <---------YAB1                            <---------WOX13(1)                 --------->AHL20(1)                  ----------->GT1                              --------->AHL20(2)                  --------->ANAC58                             <---------AHL20(1)                  --------->ANAC46              <---------AHL20(2) <---------ATHB51                  <---------ANAC55(2)          <---------AHL20(2)  <---------YAB1                  --------->ANAC55(2)          --------->AHL20(2)--------->YAB1                  --------->ANAC55(1)       --------->ATHB12   <---------AHL20(2)                  --------->ANAC58     <---------AHL20(2)  <---------AHL20(2)                 ------->TEIL          <---------YAB1     --------->AHL20(2)        <------ZmHOX2a(1) >YAB1     <---------AHL20(2)       <----------DOF2    --------->AHL20(2)  <---------REM1(1)    -----   ggtatagacatattatatgcacgtaaatagattgctgtctttttattgattaaatgtttatataatataattattaaatgtagggaggagattgagcaat  17988400  Previous    Next  AGI:  At5g44574.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G44572.1) Range:  from: 17987920    to: 17988676    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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