Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <-----------GT1                                                                                <-----------GT1                                                                                <---------AHL20(2)                ------>ZmHOX2a(1)                                           <---------YAB1               --------->TOE2(2)                                           <---------AHL20(2)           <-----------GT1                                                 --------->AHL20(1)         <---------AHL20(2)                                               <---------AHL20(2)         --------->AHL20(2)                                           --------->AHL20(2)            <     --------->AHL20(2)                                               --------->AHL20(1)           --     <---------AHL20(2)                                               <---------AHL20(2)           <- <---------YAB1--------->TOE1(2)                                     --------->AHL20(2)            <- -------->AHL20(1)                                          --------->DAG2--------->AHL20(2)   <----- -------->AHL20(2)                                         ---------->DOF2--------->YAB1      ------- ---------AHL20(2)             <-----------GT1        ----------->GT1<---------AHL20(2)<---------YAB1 ---------AHL20(1)       <----------DOF2              <---------------AGL15<---------AHL20(1) <------ ------->AHL20(2)<---------TOE1(2)                    ===============================================   attatatttattttaatcctacgattccttttatttctgtatcaaattgatattttctgtaaaaagtggaattaaattatatttaacttattagtagata  17985000          <-----------GT1        <---------AHL20(2)        --------->AHL20(2)    --------->AHL20(2)                                                                         <-----    <---------AHL20(2)                                                                         ------ ---------YAB1                                                                           ------>MYB46(1) ------->AHL20(1)                                                 <---------KAN4(2)      ------>MYB83 --------AHL20(1)       <----------DOF2                    --------->DAG2                --------->MYB52(1) --------AHL20(2)<---------YAB1                           ---------->DOF2      --------->GLK1(2)   -- ----CCA1(1)    <---------TOE1(2)                    ----------->GT1           <---------ARR11(3)<--- -->ARR11(3)   <-----------GT1<-----------GT1 --------------->AGL15           --------->RVE1(1)------ ---ARR11(3)  --------->TOE1(2)               <---------------AGL15 --------->MYB52(1) <---------MYB59 =============================================================MADS_MADS------->GAMYB   --------->AtMYB61   ttatatttattttaatcttacgattccttttatttctgtatcaaattgatatttttagtaaaaagtggaataaccgaaaaaaatctgaaccaaaccgaat  17985100                                                  <-----------HVH21                                                 --------->ANAC55(1)                                                 <---------ANAC55(2)                                                 --------->ANAC58                                                 <---------O2                                                 --------->ANAC58                                                 --------->ANAC46                                                 --------->O2                   <---------AHL20(2)     ----------->GT1                             --------->bZIP60(2)            --------->AHL20(2)   <-------MYC3                                  --------->TGA1a        ------>MYB46(1)   ------->MYC3            --------->YAB1      <---------ALFIN1         ------>MYB83<-----------GT1 ----ARR14(2)             <---------YAB1  ----------->GT1             --------->AtMYB61 --->GLK1(2)             <---------AHL20(2)  --------->SPL7           <---------MYB59 ------->LBD16           --------->AHL20(2)--------->At5g28300       --------->MYB46(3) ------LBD16            --------->YAB1    --------->TOE1(3) <---------ZAT14  ------>MYB46(1)   ------ --->ARR14(2)  ----------->GT1            --------->TOE2(3) --------->ZAT14  ------>MYB83    <-------   ccgcatatggttttatatggtttcaattttaataaaaccaaaaaccgtaacacgtcaaaaactgaactgtaaccaaaccaaattatatacgatttttacc  17985200                                                                                     ------>ZmHOX2a(1)                                                                                    --------->TOE1(3)                                                                                    --------->TOE2(3)            --------->AHL20(2)                                                   --------->ARR14(2)            <---------AHL20(2)                                                   ------->TEIL            --------->YAB1                                                       <---------ARR14(2)        <---------AHL20(2)                                                      <---------CCA1(2)       --------->AHL20(2)  --------->LBD16                                --------->ZAT2       <---------AHL20(2) ----------->GT1            --------->MYB52(1)   <---------ZAT2 ----->RAV1(2)       ---------->DOF2     ----------->GT1------->GAMYB    --------->MYB52(1) ----GT1--------->AHL20(2)--------->ANAC46        --------->TOE2(3)   --------->ANAC46     <---------   tggtttgaatttaattaaaaccgaaaacccgaaaaaaactaaaccgaaaaaaacttaaccgaaaaactgtatgcccaactgtgtatccttatctattggt  17985300                                           --------->AHL20(2)                                       --------->AHL20(2)            --------->TOE2(3)          <---------AHL20(2)         ---------->DOF2--------->ANAC58      --------------->AtSPL8           ----------->TBP        ---------->DOF2    --------->ANAC58    --------->MYB52(1)               ----------->TBP      ------->TEIL         *TSS ---CBF     --------->TOE1(3)      <-----------TBP     --------->ANAC46    ---------->DOF2    -------   ttgacttatcggtaccttagtttttctctcgacttggatatataaatatatgtctctacgaaccaaaagaaagagagcaaagtaagaaatagaagagaaa  17985400                                                         <------------------------ANAC81                                                        <---------ANAC58                                                  <-----------RAV1(1)                                               <---------MYB52(1)                                        <---------ICU4  <---------ANAC58                              <---------ZAT6 --------->ANAC55(2)            ---------->ID1                          ---------->DOF2  <-----------GT1               <----------DOF2     --------                      <----------ID1 --------->YAB1    ---------->ID1    <---------DAG2      -------- --->DOF2<-----------RAV1(1)  ----------->GT1<---------ANAC55(2)    <---------At4g35610    ------>NtERF2   gagcgagacatatgttggaagatgggaacaaagtgttattcaaaattacgttatgttgtcgttctggttttgctgcttttcgtcttcccttgcagcctta  17985500                         <--------P                         <---------MYB52(1)                        <---------MYB52(1)              ------>ZmHOX2a(1)                             <-------TEIL       ------>NtERF2<---------DOF5.7(2)            <---------AHL20(2) --------->ARR14(2) <---------At5g28300--------->ANAC46   --------->TOE2(2)                      ---- <---------ARR14(2) --------->MYB52(1)------->GAMYB--------->AHL20(2)                           <---- ->TOE2(3)   --------->TOE2(3)       <---------ALFIN1   <-------TEIL                        --------- ->TOE1(3)------>ZmHOX2a(1)  <---------ZAT6  <-----------HVH21                     ----------->GT1   gccaatcggctccttcctcagttaccggttagtgtttcaacacactatgtcatataaatacatacgtttttttgttcaaacaatattgtataaatgaatt  17985600    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  <---------AGP1  <---------ARR11(3)                                     <---------ICU4      --------->ANAC58  <---------ARR14(2)                                    --------->ICU4--------->MYB52(1)  --------->ARR11(3)                                 --------->AHL20(1)    --------->MYB52(1)  --------->GLK1(2)                         ----------->HVH21   ------->GAMYB--------->ANAC58  --------->ARR14(2)                      ----------->RAV1(2) ----------->RAV1(2) <------ZmHOX2a(1)           --------->ANAC58        <---------AHL20(2) --------->ANAC46 ------>DOF2                 --------->ANAC58        --------->AHL20(2) --------->ANAC58 -----AHL20(2)             --------->MYB52(1) ---------->DOF2 --------->At4g35610      <-----------GT1 >AHL20(2)      --------->YAB1          ------>ZmHOX2a(2)--------->YAB1 --------->ANAC58            -   aaaggatctgtttatcaaacagaacatacaaacgaaaactgatcgcctgaaagaattaattatcaactggccaaacgaaacggaagaattcactaaatat  17985700                                 --------->YAB1                                 -------->HAHB4                                <---------YAB1                 ---------->ID1               ---------                              --------->YAB1            <---------TOE2(3)                 <----------                             --------->AHL20(2)        --------->YAB1                  --------->YAB1                             <---------YAB1         --------->TOE2(3)                 <---------AHL20(2)                             <---------AHL20(2)   <---------AHL20(2)                  <---------YAB1 --------->DAG2           ------->TEIL     ------->TEIL--------->AHL20(2) <-----------GT1<---------YAB1 --------->DOF2        ----------->GT1    <---------AtLEC2   <-----------RAV1(1)--------->AHL20(2)   caaaaagcatcaagagaactgaagaatgtatataattatagtatgcatgtaattcattaatatttgttgtttagatttacatttttatattataacagta  17985800                                                                                           ----------                                                                 --------->ANAC58       ------>MYB46(1)                                                    <---------AHL20(2)                  ------>MYB83                 <---------ANAC46                  --------->ARR11(3)                   --------->MYB52(1)          ------->GAMYB                            --------->AHL20(1)                 ------->GAMYB         --------->MYB46(3)                        <---------AHL20(1)                --------->MYB46(3)     <---------MYB52(1)                            <---------ARR11(3)               -------->P    --------->TOE1(3)                              --------->AHL20(2)               ------>MYB46(1)    --------->TOE2(3)                              <---------AHL20(2)         --------->KAN4(2) >ZAT6 <---------DOF5.7(2)    <---------YAB1      --------->AHL20(2)         <----------TaMYB80 -GT1--------->DOF5.7(2)  <-----------GT1  ----------->GT1       --------->ANAC58   ------>MYB83-----   tgttttcgttaaccacattttgtggatttttcatgtttgtgtttatagtaaaatatatttgataaaaacgaaattttgtatattccaaccaaatggaaaa  17985900  Previous    Next  AGI:  At5g44572.1    Description:  unknown protein Range:  from: 17985379    to: 17986790    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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