Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------REM1(1)  <---------ARR14(2)   <-----------RAV1(1)--------->ARR14(2) <------MYB46(1)  <---------LBD16 <------MYB83   <---------ARR14(2) ---------AtMYB61 <-------TEIL           ----------->GT1 -------P     <---------TOE1(2)     --------->ANAC58                           --------->ZAT6 --------RAV1(1)--------->ARR14(2)  --------->ANAC58                   <-----------RAV1(2) -MYB46(1)<---------At4g35610     ---------->DOF2    <----------DOF2 <-----------HVH21 -MYB83  ------->TEIL<---------MYB52(1)---------->DOF2           <---------LBD16                  <--   tgttggtgttgcatctcaggtccggtttctctgcataaaagcaaagtaatttcttcttttttggtttctcgggtcagtcgaacactaaaacatgtcttct  17965200                                                                <---------ALFIN1                                                             --------->ARR14(2)                                                            --------->At4g35610                                   --------->DAG2           <---------At4g35610  <---------ZAT2                                 ---------->DOF2            <---------ZAT2       --------->At4g35610                           <---------ZAT2                   --------->ZAT2    <---------ZAT14                           --------->ZAT2                --------->LBD16      --------->ZAT14                           --------->At4g35610      ---------->DOF2         --------->ANAC46       --                           <---------At4g35610   --------->ANAC58         <---------ALFIN1         <-                    --------->ARR11(3)           --------->ANAC58------>ZmHOX2a(1)   <---------MYB52(2) --------DOF2     <---------MYB52(1)       <---------WOX13(1)<---------ARR14(2)  <---------At4g35610   ctttcattttgttttaaacagttatcttcagctccaaaaggtcggattgctacgaaaaccgcagctcctcccgcttccactgcagctactaacaagaagt  17965300                                                                                                    <                         <---------WRKY38(1)                --------->GLK1(1)       <---------At4g35610                        <<<<<<<<<<WRKY38               ---------->DOF2              --------->ZAT2  <             <-----------GT1                       ---------->DOF2                  --------->At4g35610     <-----------HVH21  <<<<<<<<<<WRKY43       --------->ZAT14                      <---------ZAT2<-- ------->At4g35610      <<<<<<<<<<WRKY26       <---------ZAT14      --------->TOE1(3)             --- --------At4g35610 <----------DOF2        <---------At5g28300       --------->TOE2(3)          <-----   aagctcatgtcatatatacaactttggtcaaatcaaatccaaatcacagtgaagaaagaaagaattctaaccttagtttaacttgcagctctgaatcaag  17965400                                                                                   <----------DOF2                                                                             --------->HSFC1(2)                                                                             --------->ZAT2                                                                             --------->At4g35610                                        <---------ARR14(2)                   <---------HSFC1(2)  --------->ALFIN1                      ------->TEIL                         <---------At4g35610 ---------bZIP60(2)       <---------ANAC58                                   <---------HSFB2a(1) ---------ANAC46          <---------ANAC58                      ---------->DOF2    <---------------AGL15 -------ZAT14           <------MYB46(1) --------->GLK1(2)------------------------>ANAC81 ------>ZAT14           <------MYB83    --------->ARR14(2)  ---------->DOF2  --------->HSFB2a(1) ----ANAC55(2)        <--------P --------->SPL7     <---------YAB1        <---------At4g35610   tgaagtggatgagcttgagaagaggttggcttcgctacgacgaatctgagatttatgaaaaacaaagaaagaagagagcagcttccttttttttgttatc  17965500                      <---------At4g35610      --------->YAB1         <---------TOE2(3)             <          --------->At4g35610        --------->ATHB12           <----------DOF2                     <          <---------At4g35610       <---------TOE2(3)       <---------TOE1(3)                       -      --------->ARR14(2)            <---------YAB1          <---------TOE2(3)                       -   tctgtataaatctgctgaaacttaagctgtttgatattaagattggccatcagaaaactattaaggctttttaagaaatgaagaagacatgtatacacat  17965600                                                                                 <------ZmHOX2a(1)                                                                      <---------AHL20(1)                                               --------->YAB1         --------->ARR11(3)                                           --------->AHL20(2)         --------->AHL20(1)                                           <---------AHL20(2)         <---------ARR11(3)      <------                                          --------->AHL20(1)         <---------AHL20(2)       <------    --------->YAB1                        <---------AHL20(2)     --------->AHL20(2)      <---------ANAC58   <---------YAB1------>ZmHOX2a(1)        <---------AHL20(1)     <---------AHL20(2)      <---------ANAC58 ---------AHL20(1)                        --------->AHL20(2) --------->AHL20(2)--------->ANAC58 ---------AHL20(2)                    <---------AHL20(2)     ----------->TBP   --------->ANAC58 -------->AHL20(1)       *TSS--------->bZIP60(2)             <---------YAB1<---------ANAC58  <------- -------->AHL20(2)   --------->ANAC46------------>CBF    <---------ANAC46  <---------ANAC58  <-------   attttattatagatagttcctctacgtagccacttcatattcaatttaataagcatgtttcttataaataaatattttcgtaaggaatagtgcttgcttt  17965700                     ------------>CBF                        <---------YAB1      <---------TOE2(2) --------->ANAC58                    --------->ARR11(3)      <---------TOE1(2) --------->ANAC58                    <---------ARR14(2) ----DOF2           <-----------GT1                         <---------ARR11(3) ---DAG2     <---------ANAC58                              --------->CCA1(1)                       <- --ANAC58    <---------ANAC58                              --------->RVE1(1)           <---------ICU4 --ANAC58    <---------ANAC46      <---------MYB52(1) --------->YAB1                  --------->AHL20(2)   attagtcataggtttgagtgtttgacaatccatatcagttatgttcacaagttgtataagaatatctttggtccatagatgctagagaataaatactcta  17965800                                  --------->ANAC55(2)                                  <---------ANAC55(2) --------->AHL20(1)                                  <---------ANAC46    --------->ARR11(3)                                  <---------ANAC55(1) <---------ARR11(3)            <---------TOE2(3)     <---------ANAC58   --------->CCA1(2)    --------->AtLEC2              ----------->GT1   <---------ARR11(3)    --------->ANAC58              <---------ANAC58  --------->ARR11(3)       --------->AHL20(2)    --------->ANAC46       --------->YAB1     --------->CCA1(2)              <---------AHL20(2)    --------->ANAC58 --------->ANAC58        <---------ARR11(3)      <---------ARR11(3)   <---------LBD16   --------->ANAC58        --------->ARR11(3)      --------->ARR11(3) --------ICU4        --------->AtLEC2    ---------->DOF2            <---------CCA1(2)   attttcacgcaaataatgttgtcatgcaaacacaatacgtgaaaaaagatataagatatattcgaagtttatatcttatttttttagtgacttaacaaaa  17965900                                                                        <---------HSFB2a(2)                     <---------YAB1                           ---------->TaMYB80                  ---                   --------->YAB1                  <----------DOF2 <---------ANAC58    ------>ZmHOX2a(1)                   <---------ICU4              --------->YAB1 --------->GLK1(2)    <---------ARR11(3)                 --------->ARR11(3)           <---------YAB1  <---------KAN4(2)--------->YAB1    <---          <---------TOE2(3)            --------->At4g35610    <---------ARR14(2)   --------->ARR11(3)   --------->At4g35610          <---------ALFIN1 <---------YAB1    <---------ANAC58--------->ARR14(2)   <---------At4g35610  ------->TEIL   <---------At4g35610    --------->ARR14(2)   <---------ARR14(2)   caatgagctgttaatgaaaaatcatgaatcacgtccacatgagctgttatcatctttgttagagaatatgcgttctgcaaatgaaaatcctcgaccatat  17966000                                                            <---------MYB46(3)                                                           <---------AtMYB61                                                           --------->ALFIN1                                                  <---------ARR11(3)                           <-----      --------->ANAC46                            --------->ARR11(3)                    --------->ZAT6    <-----------GT1                              --------->YAB1                    ----------->GT1 << ------>YAB1         <---------ALFIN1           <---------ATHB12 <----------DOF2  <---------ARR11(3)- ----TEIL         <-----------GT1      <----------DOF2   <---------ANAC46         --------->ARR11(3)<   tcatattcacatcattttcgttaccacttcgatagctacttctttggccaatgatattggtgtggttctttcttctcagtataagatgttacactcactt  17966100  Previous    Next  AGI:  At5g44560.1    Description:  VPS2.2. similar to VPS2.3 [Arabidopsis thaliana] (TAIR:AT1G03950.1); similar to Os03g0639800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050739.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62571.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 17963184    to: 17965627    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g44562.1    Description:  other RNA Range:  from: 17964844    to: 17965625    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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