Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------ANAC58           <---------ANAC58                                               <-----------ARR10       <---------ANAC58                                                   --------->ARR11(3)       <---------ANAC58                                                   <---------ARR11(3)       --   ---------->DOF2                                                       <---------GLK1(2)       <---  <---------WRKY12                                                 ------>MYB83               -------  <---------WRKY45                                                 ------>MYB46(1)         ==========  <---------WRKY38(1)                                            --------->AtMYB61         ------>ZmHOX2a(1) --------->WRKY18(1)             ------>ZmHOX2a(1)              --------->HSFB2a(1)        ========== -----------HVH21     --------->ZAT14                         <-----------GT1        --------->At4g35610 ---At4g35610       --------------->AtSPL8  ----------->RAV1(1) <---------HSFB2a(1)  <---------At4g35610   ctggtcaaagcttgcttccatctctgtaccatctcctctggtcttccaacacaagtttttttaaaaaccttcccaaaatctcccttctgcttcctcacat  17951000            --------->YAB1         --------->ANAC46       <---------ALFIN1      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    ------->TEIL    --------->ARR14(2)                 <---------MYB59                                <---------ALFIN1    <---------ARR14(2)                 --------->MYB46(3)                          --------->ANAC46 ------->At4g35610                  <---------WRKY18(1)                         --------->ANAC46 --------RAV1(2)   --------->MYB52(1) --------->ANAC46                --------->AtMYB61 -->TGA1a--------->bZIP60(2)       ----------->HVH21         <---------GLK1(2)  --------->ANAC58 ============HOX2a_HOX2a   <---------YAB1------>MYB83        <---------ICU4     --------->ANAC58 ===========HOX2a_HOX2a<-----------HVH21 ------>MYB46(1)  --------->YAB1      <---------ICU4       --   cagatggatccacatcataaaaaacggtcatcactgtttgacccaactcttctctgcatttcataatctccaccaattcatcaagacaccacttcgaaga  17951100                                       ------>ZmHOX2a(1)                                     ------>ZmHOX2a(2)                                     ================================HOX2a_HOX2a                                    =================================HOX2a_HOX2a                                    <------ZmHOX2a(2)                                   --------->AGP1                                   <---------ARR11(3)                                   --------->ARR11(3)                                   <---------GLK1(2)                                   --------->ARR14(2)                                 ----------->ARR10                        ======================HOX2a_HOX2a             --------->ANAC58 ================HOX2a_HOX2a                     ------>ZmHOX2a(1)             --------->ANAC58 ------>ZmHOX2a(2)                          ------>ZmHOX2a(2)           ---------->DOF2   <------ZmHOX2a(2)                          =============HOX2a_HOX2a        ------>ZmHOX2a(1)    =================HOX2a_HOX2a               <------ZmHOX2a(2)        --------->HSFB2a(2) <---------ARR11(3)                         ------->TEIL        <---------HSFB2a(2) --------->ARR11(3)                         --------->ARR14(2)        ===================================HOX2a_HOX2a        ==================HOX2a_HOX2a        =============================HOX2a_HOX2a              <------ZmHOX2a(1)                     -        ============================HOX2a_HOX2a<---------ANAC58        <---------ARR14(2)         <--        ====================================HOX2a_HOX2a       =================HOX2a_HOX2a      -----        =======================HOX2a_HOX2a     <---------ANAC46     <---------ATHB12       --------->ICU4        --------->LBD16 ------>ZmHOX2a(2)      <---------ANAC58   --------->MYB52(1)  <---------At4g35610 ------->TOE2(3)    <---------YAB1 <---------ARR14(2)   --------->At4g35610------>ZmHOX2a(1)  <------   accatagttcctcgaaagcaagatgatcgcgatcttagatcctctaatagcctgtaagagctcaggaccaatggatcctcctctcttcatctcattatca  17951200                                                              <---------ARR11(3)                                                              --------->ARR11(3)                                                            ----------->ARR10                                                           ------>NtERF2--------->ANAC58                                                          --------->LBD16         --------->ANAC58                                                         <---------ANAC58         --------->ANAC58                                                         <---------ANAC46    <---------At4g35610                                                         <---------ANAC58    --------->At4g35610 ------->TEIL<---------ANAC58                        <----------DOF2    --------->ANAC58 -------->MYB52(1) <----------DOF2     ----------->HVH21<---------LBD16 --------->ANAC46          --- -------ATHB12  <---------ARR11(1)    <XXXXXXXXXXXXXXXXXXXXMIR783      <---------LBD16           ---- ---->WOX13(1) <---------MYB52(1)<---------YAB1  --------->ANAC58      --------->LBD16           ---- ---YAB1     <---------ANAC58 ------>ZmHOX2a(1)  --------->ANAC58     <---------ALFIN1       --------   atgaacggtgtgattccgtttctttgaaactccttctgaatgtgactgagcaagcctttgcggacatcttccccacggaagctcaagaaaacagggtgca  17951300                                                                                --------->KAN4(2)                                                                               <---------KAN4(1)                                                                    --------->ANAC58       <----------ID1                                               --------->ANAC58 ------>MYB46(3)                                                    --------->ANAC46         -------- ----->ANAC58                        --------->CCA1(2)              --------->ANAC55(2)      -------- ----->ANAC58             <---------At4g35610           <---------YAB1 <---------GLK1(1)     -------- ->ALFIN1  ---------->DOF2--------->At4g35610>>>>>>>>>TBF1     <----------DOF2 --------->KAN4(1)   accaattttgagacaaagaagaagggggagatgaagaagatagagaagaagaaatattcttatttcttttacgaaatctgaatattctataaaccaagaa  17951400                                                                                         <---------ANAC55(2)                                                                                         --------->ANAC55(2)                                                                                         ============                                                                                       >>>>>>>>>>>>WRKY18                                                                                ------->MYC3                                                                                <-------MYC3                                                                                ------->MYC2      <--                                     <------ZmHOX2a(2)                   <----------DOF2 --------->TGA1a                    <---------WOX13(1)                                   ==========================bZIP_DOF                   <------------CBF <---------ARR11(3)                 <---------HSFC1(2)<---------O2      --------->GLK1(2)---------->DOF2   --------->MYB52(1)            --------->HSFC1(2)--------->O2 ->ANAC46         --------->ATHB12  --------->ARR11(3)           ---------->DOF2<-------MYC4   <----- ->ANAC58        <---------YAB1 --------->YAB1                   ==================================bZIP_DOF ->ANAC58  <---------MYB52(1)  <------ZmHOX2a(2)      <---------------------WRI1<-------MYC2   <-----   acatgaagaatccattagtatgattgaaagacgatcaagatcacaacggttttttcagagctattaacaaagaagctttgcacatgttgacacttgactt  17951500                                                                  --------->ATHB51                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                                 <---------YAB1                                                                 --------->ICU4                                                              --------->AHL20(2)                                                             <---------AHL20(1)                                                             --------->AHL20(2)                                                            --------->YAB1                                                          ------>MYB83      <---------CCA1(1)                                                          ------>MYB46(1)  --------->ARR11(3)                                                     --------->AtMYB61    --------->YAB1                                                    <---------MYB55(2)  <---------TOE2(3)                                                    --------->MYB46(3)<---------AHL20(2)                                                   ------>MYB83--------->YAB1                                                   -------->P--------->AHL20(1)         --------->GLK1(2)                  <---------HSFC1(2)<---------AHL20(2)    --------->AtLEC2 =====bZIP_DOF                              --------->HSFC1(2)<---------YAB1<---------RVE1(1) ----------CBF          ---------->DOF2   ------->TEIL  <---------MYB111(1)<---------ARR11(3) -----DOF2 <------------CBF         <-------TEIL   ------>MYB46(1)<---------ICU4  <---------AtLEC2 ----DAG2<---------ARR14(2)   <------ZmHOX2a(1)   ------>ZmHOX2a(1)  --------->AHL20(2)   tattgacagagaatattgacattagcaaaagaggagggttcatggatgtttcctaccaccaaatataattatttaatgatattttcatggaaaatttgtg  17951600                                        --------->YAB1                                <--------------                                        --------->TOE1(3)                     <---------AHL20(2)                                   --------->AHL20(2)                 ----------->RAV1(1)     -------                                   --------->AHL20(1)                <---------ETT(2) ---------------                                   <---------AHL20(1)                --------->ETT(2)--------->ICU4                                --------->AHL20(2)                   --------->TGA2(1)<---------ICU4                         <---------TOE2(2)                           --------->bZIP60(1)      <------                   ----------->HVH21<---------AHL20(2)               <---------bZIP60(1)  -----------                  <-----------HVH21<---------AHL20(2)             ----------->TGA1<---------AHL20(2)           ----------->HVH21    --------->YAB1         ----------->RAV1(1)    --------->AHL20(2)     --------->REM1(1)<---------ANAC46  --------->TOE2(3)       --------->At4g35610  <---------YAB1   gtatactacatcactgaccctgtaacgtaggctataatataatcttaagaatttttccaacatataagatgacgacagaattatataatgagtacaatca  17951700                                                          --------->ANAC58                                                          <---------RAP2.6(2)                                                          --------->ANAC58                                                          <---------ANAC55(2)                                                          --------->ANAC55(2)                                                         <---------LBD16                                                         --------->RAP2.6(3)                                                         <---------At5g28300                                                        --------->MYB52(1)                                                        <-----------GT1                <---------ANAC46           <---------ARR11(3)     --------->TOE2(3)                 ---------->DOF2 <---------ARR14(2) -AtSPL8 <------------CBF   <---------------AGL15      --------->ARR14(2)           <---------AHL20(2) ----->CBF <---------MYB46(3)  <---------YAB1    --------->HSFB2a(2)                --------->AHL20(2) >AtSPL8--------->ATHB12    --------------->AGL15<---------HSFB2a(2)           <---------ANAC46 ---ATHB12<---------WOX13(1)========================================================================= ->CBF <---------YAB1       --------->ICU4 --------->ARR11(3)             --------->At4g35610--------   atttataccttgattgttgtttggaatgaactgattatagaaaaagaacttgtagaagttacggcattgctctatgaactgacttataaattgactggca  17951800                                                                       <---------MYB55(2)                                                                       --------->MYB46(3)                                                                      ------>MYB83                                                                      ------>MYB46(1)                                                                    --------->AtMYB61                                                                    <---------ALFIN1                                                                    --------->DEAR3(1)                       <-----------HVH21                           --------->ANAC46           --------->ARR14(2)                                    --------->ANAC58           <---------ARR14(2)                                    --------->ANAC46          <---------MYB52(1)                                     --------->REM1(1)       ----------------->AGL1                                    --------->ANAC58       <-----------------AGL1                                   --------->SPL7 <---------ZAT18       <-----------------AG                                  <---------ANAC58  --------->ZAT14      <---------At5g28300                                    <---------ANAC58  <---------ZAT14    ---    <------ZmHOX2a(2) --------->ALFIN1                      <-------TEIL       --------->ZAT18    <-- ========================MADS_MADS   <---------DAG2         --------------->AtSPL8           -------- --->GT1--------------->AGL15        <----------DOF2        --------------->AtSPL3        <---------AtLEC2   aaatggatcaccgttttcggtaatgtgtgagacgaactacttttgcaaagtctgtccataggttcgtacaccaccctccaatgcactggtctgcaaggta  17951900  Previous    Next  AGI:  At5g44510.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G11250.1); similar to RPP1 (RECOGNITION OF PERONOSPORA PARASITICA 1) [Arabidopsis thaliana] (TAIR:AT3G44480.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70119.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPro:IPR00218 Range:  from: 17946900    to: 17951415    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g44520.1    Description:  ribose 5-phosphate isomerase-related. similar to ribose 5-phosphate isomerase-related [Arabidopsis thaliana] (TAIR:AT3G04790.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96323.1); contains InterPro domain Ribose 5-phosphate isomerase; (InterPro:IPR004788) Range:  from: 17951514    to: 17953754    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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