Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------DAG2                                        --------->YAB1 <-----------GT1           <----------DOF2<----                        <---------DEAR3(1)      <---------YAB1                <---------ALFIN1  ----- ------ZmHOX2a(2)       ------>ZmHOX2a(2) <---------YAB1               <----------DOF2    <----------   ggatcaaaatgttttcttgaaactgatcggcgttttagtcaattttgatgactattgttacattttcaagactctttctgccactttttgttttactctg  17938300                                                                               <---------YAB1                                                                         <---------AHL20(2)                                                                        --------->AHL20(1)                                                                        --------->AHL20(2)                                                                   --------->AHL20(2)                                                              <---------AHL20(2)                                                            <---------YAB1     <---------AHL20(2)                                                           <---------AHL20(1)--------->YAB1                                                         --------->ICU4 --------->ARR11(3)                                                       --------->YAB1   <---------AHL20(2)                                                      <---------YAB1<---------AHL20(2)   --------->At4g35610         ---------->ID1                           <---------ICU4--------->AHL20(2) <---------AHL20(2) -----ZAT14          <---------DAG2         --------->YAB1<---------ICU4<---------ARR11(3) ---->ZAT14 ------>ZmHOX2a(1)   ---------->DOF2--------->YAB1 --------->AHL20(2)   --------->AHL20(2) -GT1<----------DOF2 <----------DOF2     ----------->GT1 <---------YAB1 <---------AHL20(1)         --   ttctgttctttttcctaatgcaactttttttgactaaagtattttgttataatcttttcattatttttatataatatatttataatttatcagttgaatg  17938400                                                                                              <------                                           <---------AHL20(2)                            <---------AHL20(2)                            --------->TOE2(3)                                    ----------->RAV1(1)                           <---------------AGL15    <----------DOF2       <---------ALFIN1  <--------                      <----------DOF2     --------->AHL20(2)           <---------TCP15(1)--------->AHL20(2)    <-----------GT1   <---------DAG2   --------->YAB1                  --------->PCF2    <---------YAB1 -------->DOF2<---------GLK1(2)   ----------->GT1   <---------DAG2  <---------TOE2(3) --------->AHL20(1)   taaaagtaactccctatattctcacttttacataaatggtttcataaaattcaactttttctaactgattaaggtcccacttgcaacatatattattatc  17938500                                                                                 <---------AHL20(2)                                                                               <---------------AGL15                                                                               --------------->AGL15                                                                              <-----------------AG                                                                            --------->AHL20(1)                                                                            --------->AHL20(2)                                                                            <---------AHL20(1)                                                                            <---------AHL20(2)                                                                           --------->AHL20(2)                                                ---------->ID1             <---------AHL20(2)                                              --------->WRKY12          <---------AHL20(1)                                              ----------->HVH21         <--------ATHB1                                              --------->WRKY38(1)       --------->YAB1                                              --------->WRKY45          <---------ICU4                                            <----------DOF2             --------->ATHB51                                      <------MYB83                      --------->AHL20(2)                                     --------->MYB59                   <---------ATHB51                    <---------AHL20(2)<------MYB46(1)                  <---------ATHB12                  ----------->TBP --------->GLK1(2)                    --------->ICU4 -----GT1   --------->AtLEC2     <---------GLK1(2)              <---------MYB52(1)                 <- -YAB1 <-----------GT1     ------->TEIL <--------P <----------DOF2 ------------>CBF   ----------->GT1   tctctgttttctccatgcatataaaaatgtatgcagaatttggtagctttgaccttttatatttctgttagcaataattttatttttttggtaaattctt  17938600                                             <---------GLK1(2)                                             <---------ARR11(3)                                  <------------CBF                                 --------->ATHB12                                <---------YAB1                            <---------ARR11(3)                      ----------->RAV1(1)    --------->ARR11(3)                   <---------AtMYB61                   --------->ANAC58          --------->ARR14(2)                 <----------DOF2                   --------->ANAC46          <---------ARR14(2)                <---------ANAC58          ------------>CBF  --------->ARR11(3)                                 <---------ANAC46          <---------At4g35610 ------>ZmHOX2a(2)       <---------AHL20(2)  <-----------RAV1(1) ---------DOF2     --------->ANAC58 <-----------RAV1(1)     <-----------RAV1(1)<---------ANAC58     -   cctttgttttgcagcaatctccagcaacatgatcttcattgttgctagatactgatttttttttgtgggattttctatgttgctttggtctcaagtctat  17938700                                                                                                  ---                                                                                                <----                                                                                             --------                                   ------------>CBF                               <---------ARR11(3)                                  <-----------GT1                                 --------->ARR11(3)                          <---------TOE2(3)       ----------->RAV1(2)   ---------->DOF2      <------- ----------->CBF          <---------TOE1(3)    <-------TEIL       --------->MYB52(1) <----------DOF2   gtttcaattctaagaccagaacaaatttgaggtttttttcaatgctaaattcgtctggagtaagaactcaacgaagaagcccaagacctttgtctctagg  17938800                                        <---------ICU4                                        --------->YAB1                                       <---------YAB1                                     --------->YAB1                                    <---------YAB1           <---------YAB1          <---------ARR11(3)         <---------ICU4            --------->ARR11(3)        <---------YAB1            --------->YAB1                                 <---------ANAC46       <---------GLK1(2)         <---------YAB1      --------->DAG2              <---------ANAC58 -------->GT1                <---------ANAC58   <---------YAB1                   <---------ANAC58 --ZmHOX2a(1)                <---------ANAC46   --------->LBD16               <---------WOX13(1) ->HSFB2a(2)      ----------->RAV1(1)<---------ICU4 ---------->DOF2 <---------HSFB2a(2) --HSFB2a(2)<-----------GT1  <---------ANAC58   ------>ZmHOX2a(1)   --------->HSFB2a(2)         -----   aggtagaaagattattactccaacaaaatttgcttatgatcatcataatcctgataaagttttggattttgtagaaatggattgcttagaacccaaaaca  17938900                                                                 --------->WRKY18(1)                                                               --------->WOX13(1)                 ---                                                          <---------YAB1                         ----                                                     <---------ICU4                              <---                                                     --------->ATHB51                           -----                  <---------GLK1(2)                  -------->ATHB1                           -------                 <---------HSFC1(2)                 <---------ATHB51            <-----------GT1 <----                 --------->HSFC1(2)   --------->YAB1<---------YAB1    --------->YAB1         <------- ----->DOF2   ---------->DOF2 --------->At4g35610   --------->ICU4 --------->WOX13(1)        --------   aagaacaatctcactggaaagcttctcttagtagcttcactcttaattttagccattattgtgatcagtcaatcttcaagtttcacatctccaagcgcgg  17939000                                                                             <---------MYB52(1)                                                                           <---------ANAC58                                                                           <---------ANAC46    ------>ZmHOX2a(1)                                                      <---------ANAC58   --------->TOE2(3)                                                  <-----------RAV1(1) ------>SPL7                                                       --------->ARR14(2) ----->ARR14(2)                                                    <---------MYB52(1) ------ARR14(2)                      <-----------GT1               <---------ARR14(2) ---->At5g28300                   <----------DOF2                 <-------GAMYB  <---------ANAC58 -------->AtSPL8         --------->TOE2(2)                       <---------MYB46(3) -----SPL7               --------->TOE1(3)      <---------ICU4  <---------DEAR3(1)<----------DOF2 --ZAT18                 --------->TOE1(2)   --------->YAB1     <---------ANAC46 <---------ANAC58 ->ZAT18                <---------HSFB2a(1) <---------YAB1      <---------RAP2.6(2)            ------   tacctccttagtcacatactctaaaaaccttcgaaacttttacattttcataatgttttttttttggcggttttgttgcgtttgcttttagttttctcaa  17939100                                       ----------->GT1                                       <---------MYB46(3)                                           <                                    <---------At4g35610                                       -------                                   --------->ALFIN1                                          ========                                 <---------MYB46(3)                                          <-------                                <---------DEAR3(1)                                          <--------                                <-----------RAV1(1)           <----------DOF2            --------->ANAC46                                --------->ALFIN1         <---------LBD16                 <---------ANAC55(2)       <------ZmHOX2a(1)        <---------AtMYB61      ------->MYC3                     --------->LBD16   <------ZmHOX2a(1)   --------->MYB52(2)              <-------MYC3                    <---------ANAC46 ---->DOF2----------->HVH21  <-----------RAV1(1)  <-----------HVH21              <-------TEIL<-------   agagaggaaggagtgactcatgtgttagtcactggtggtgctggttatatcgggtcacatgcggctttaagacttcttagagattcataccgcgtaacca  17939200  Previous    Next  AGI:  At5g44480.1    Description:  DUR (DEFECTIVE UGE IN ROOT); catalytic. Identical to Putative UDP-arabinose 4-epimerase 4 [Arabidopsis Thaliana] (GB:Q9FI17); similar to NAD-dependent epimerase/dehydratase family protein [Arabidopsis thaliana] (TAIR:AT4G20460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43109.1); contains InterPro domain UDP-glucose 4-epimerase; (InterPro:IPR005886); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 17938742    to: 17940870    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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