Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------SPL7     <---------RAP2.6(2)                                                                     <-------    --------->RAP2.6(3)                                                                     --------- -----ANAC58                                                                              <---------LBD16 -----ANAC46                                                                        ------>MYB46(1) --MYB83  <------NtERF2                                                             ------>MYB83 -----ANAC58                                                                        -------->P --MYB46(1)                <------MYB46(1)                              --------->LBD16 <-----------HVH21 ------>GT1    --------->ANAC58                                       <---------LBD16----------->RAV1(2) -MYB46(1)--------->LBD16  <------MYB83                        <---------MYB46(3)  ------>MYB46(1) -MYB83 --------->SPL7    <---------AtMYB61                <---------ALFIN1      <---------MYB59 --->MYB55(2)  --------->ANAC58                            <-----------RAV1(2)   --------->MYB46(3) ----MYB46(3)---------->DOF2  <---------MYB46(3) <-----------GT1 <---------MYB52(1)------>MYB83 -P--------->MYB52(1)     --------->MYB111(1) <---------YAB1 <---------ZAT2     --------->ANAC58 --MYB52(1)<------NtERF2--------->CCA1(2)   --------->YAB1--------->LBD16       --------->ANAC58 <---   gtgaataccggccgggaaagcaagagatttggtggttttcccaatctcataatacaattccccagccgttgctccggtttggacccaacctgtccggtta  17929100                                     ----------->HVH21                              ---------->DOF2                       --------->KAN4(2)                       <---------ARR14(2)                  --------->ANAC58                      --------->HSFB2a(1)                  --------->ANAC46                      --------->HSFC1(2)                   --------->ANAC58          >>>>>>>>>>GT-1   --------->TOE1(3)               --------->ANAC55(2)                 ------          --------->ARR11(3)------>ZmHOX2a(1)           <---------SPL7                         ------         --------->YAB1<---------GLK1(2)              <---------------AtSPL8               <---------DEAR3(1)        <---------ATHB12   --------->TOE2(3)         <-------GAMYB                        --------->DEAR3(2) --MYB52(1)           <---------HSFB2a(1)           <---------MYB46(3)                 ----------->HVH21 >LBD16<---------TOE2(3)--------->GLK1(2)           --------->MYB52(2)    <---------ARR11(3)  ------- ------YAB1           <---------HSFC1(2)  <---------At4g35610             --------->ARR11(3)<--------   tcaacgtctaatgatatagaccgaagattccttaaatcgatgacagcgaatggtttgttgtacgcaatgtaagagagaccttcgtagcagtgaccggcgc  17929200                                  --------->At4g35610                                  <---------At4g35610                                 ------->TEIL                                 --------->ARR14(2)                                 <---------ARR14(2)                                 <-----------ARR10                             <---------ZAT18                        --------->ZAT2                          <---------DOF5.7(2)                        <---------At4g35610                  <----------DOF2                        --------->At4g35610         <-----------HVH21      ------>ZmHOX2a(1) <---------ZAT2             --------->ANAC46           <---------WOX13(1) >NtERF2               ------->TEIL                --------->ANAC58         --------->ATHB12       <- --->ABI4(2)        --------->ANAC46               --------->ANAC58        --------->ICU4          <- -->DEAR3(1)        --------->AtLEC2  ----------------------->TaNAC69(2)   <---------YAB1         <-- -ATERF1(1)   --------->GLK1(1)  --------->GLK1(2)------->TEIL--------->DOF5.7(2)          <---------AtMYB61   tccgagtccttacatgaattccatgcagctgtgcgcatctgatcacagtttgaacgtcactggctttaacgggagtgatgattgagaccggtttaggtgt  17929300           --------->ARR11(3)           <---------ARR14(2)                                                               ---------           --------->ARR14(2)                                                            <---------DEAR3(1)           --------->GLK1(2)                    ---------->DOF2                       ----------->HVH21          <---------GLK1(2)               ----------->GT1                         <---------ANAC58 --------ANAC46                  --------->GLK1(2)                                <---------ANAC58 --------HSFB2a(2)             --------->HSFB2a(1)                            <----------DOF2 -------LBD16                  --------->HSFC1(2)                   --------->ALFIN1 --------->SPL7   ttcggaaaccgagaatcttggattttgtatcgaagaatccaatatggaaaaaaaggaagagtctttggaagtgtgtatgactttgggttcgacggtgttg  17929400                                                   --------->At4g35610                                         <------MYB46(1)                                       <--------P  <---------At4g35610             ---------->DOF2         <---------MYB46(3)                    ----------->GT1           --------->ANAC58          --------->ATHB12           <------ZmHOX2a(1)           ---------       ----------->GT1    ---------->DOF2<------MYB83          ----------->GT1      ----------->GT1 >ALFIN1   --------->ANAC58         <---------YAB1 --------->ZAT2----------->GT1---------->DOF2   tcgttcattcggtaagaaagacacttaagaaagtcttcatggttggagccatgagctgaaacaagaggagaaatattcagtgaaaagagtaaaatagtaa  17929500                                                           <---------WOX13(1)                                                          <---------ANAC58                                       <------------CBF   <---------ANAC58                                       *TSS           <------------CBF                                <---------MYB46(3)   --------->ATHB12       --------->DAG2                             <------MYB46(1)        --------->ICU4         ---------->DOF2                            --------->MYB111(2)     <---------YAB1     <----------ID1  --------->DAG2           --------->CCA1(2)      ---------->DOF2<---------AHL20(2)        <---------ZAT14 ---------->DOF2        <---------TOE2(3)      ----------->GT1  --------->AHL20(2)         --------->ZAT14 -->GT1     --------->GLK1(1)<------MYB83  <---------TOE2(3)    <-----------TBP   <-----------GT1   -   acaaaaagcttgagaactccatttctaagataggtggatagtattgagaatgtaaagattgagtgattttatagggaaaaagtttttcgaccctacagag  17929600          ---------->DOF2       --------->HSFB2a(2)       <---------HSFB2a(2)   <---------bZIP60(2)   <---------ANAC46   <---------O2                              <----------DOF2   --------->O2    --------->TOE1(3)        xxxxxxxxxxxxxxxx>smallRNA(i)            <----------DOF2 ---------->HVH21  --------->TOE2(3)  <---------TOE2(3)                ---------->DOF2   ttttgacgtcgagaaagaaaaccctaaaattttaaaaattaagaaaactttcaagttttgacaagagttttcacaaagtttgttttctttttttttgccc  17929700         <---------ANAC55(2)         <---------ANAC58         <---------ANAC58         <---------ANAC46     <---------HSFB2a(1)     --------->HSFB2a(1)     <---------HSFC1(2)     --------->HSFC1(2)                                                                         ----- --------->ANAC58                                                                           <-------- --------->ANAC46 --------->DAG2             ----------->GT1                    --------->AHL20(2) --------->ANAC55(2)                     <---------AHL20(2)            <----------DOF2      --------- --------->ANAC58---------->DOF2         --------->AHL20(2)            <---------DAG2       --------- <---------ANAC55(2)                    --------->AHL20(2)          <-----------GT1         ---------   aatacgaaatttcgtaagaaaaagtttcccataaatctactatttatttgtaaaatttgcaaaacaatttatactttttggataaaatgttgaattattt  17929800                --------->GLK1(2)             --------->ANAC58         --------->ANAC58         --------->ANAC46       ------>ZmHOX2a(1)   --------->ARR11(3)   --------->ARR14(2)   <---------ARR11(3)   <---------ARR14(2) ------>GT1  --------->ANAC58 -AHL20(2)   --------->ANAC46                                                                      <- >ATHB51 --------->ANAC58                                                                          <- >ATHB12<---------LBD16<----------DOF2                                                       -------- >AHL20(2)--------->LBD16 --------->TOE2(3)        <----------DOF2                   <-----------GT1   gtaaaaatcctccgcaagaaactgtctttcttaaatacgattttgctacttatcttttttgaaccaaaattgggctatctatctaattaacccaattgta  17929900                                                                                                -----                                                                                           <---------TGA2(1)                                                                                           <---------bZIP60(1)            <---------------AtSPL3                                                         <---------ANAC58            <---------------AtSPL8                                         <-----------GT1 --------->TGA2(1)        ---------->DOF2                                                    --------->ZAT6  --------->bZIP60(1)    <---------------AGL15                                            <------MYB83          <---------ANAC58   ----------------->AGL3      --------->ANAC58       --------->TOE2(3) >>>>>>>>>GT-1      <---------ANAC55(2)   <-----------------AGL2      --------->ANAC58     ------>MYB83     <---------MYB46(3)    --------->ANAC55(2)   ----------------->AGL1     <---------LBD16       ------>MYB46(1)  <------MYB46(1)       <---------ANAC46 --------ANAC58             --------->ZAT18        ----------->RAV1(1)<-------GAMYB       ----------- --------ANAC58      <---------YAB1         <---------ARR14(2)       ----------->GT1     <---------TGA2(2) ->YAB1<---------ATHB12---------->DOF2      --------->ARR14(2)   <-----------RAV1(1)    ----------->TGA1   atcgtgccaataaaggagtacttataaaagggcacgggaactagcatatataccaacattagtttcaatgttggttaatactatacatgaatgacgtaag  17930000  Previous    Next  AGI:  At5g44440.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44410.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20820.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63059.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) Range:  from: 17927784    to: 17929539    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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