Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          ----------->GT1          ----                                                                      ---------->DOF2            ----                                                                     <---------AHL20(2)       -------                                       --------->DAG2         ------>MYB46(1)                --------                                      ---------->DOF2       --------->DEAR3(1)               --------                               ------->TEIL                 --------->DREB2C(2)            ----------        --------->YAB1        <---------AtLEC2             --------->DEAR3(2)        --------->ANAC46      ------>MYB46(1)    <---------ARR14(2)           ----------->HVH21<---------TOE2(3)  <------ZmHOX2a(2)      ------>MYB83       --------->ARR14(2)    --------->YAB1 ------>MYB83         --------->ANAC46--   gagaaaccaaacataaaaacataaacatatatgcatgtcataaagtcactcatagagtgacaccgacttatttaaagtaaaatacacacacgatcaagca  17926300                                    <-------TEIL                                   --------->CCA1(2)                                  --------->ARR14(2)                                  <---------ARR14(2)   <---------GLK1(2)         --------->MYB52(1)   --------->ARR11(3)       ----------->HVH21                                  <---------At4g35610   <---------ARR11(3)     <---------bZIP60(1)                         <-------TEIL ----->ANAC58             --------->ANAC55(2)                        --------->CCA1(2)              - ----->ANAC58             <---------ANAC55(2)                        <------ZmHOX2a(2)          ----- -->MYB46(3)              --------->ANAC58    --------->At4g35610   --------->ARR11(3)          <---- ->ANAC58                 --------->bZIP60(1) <---------At4g35610   --------->AGP1              <---- ->ANAC58           --------->TOE2(2)         --------->ZAT2        <---------ARR11(3)          ----- >DOF2     <--------P     --------->ANAC58    <---------ZAT2        <---------ARR14(2)  <---------TOE2(3) -------->DOF2      --------->TOE1(2)       --------->ZAT18         --------->ARR14(2)  <---------TOE1(3)   ccaaagatttttggtagattaacatgggacgtaacagatacatttgtgagctgggaagacatagttgcaagatccatgttttgctccctcaaggttaatg  17926400         <---------AtLEC2          ----------->HVH21         <---------ANAC58        ----------->RAV1(2)         <---------ANAC58      --------->ANAC58          <---------HSFB2a(2)     <---------ANAC58          ------->GAMYB         <---------ANAC58     <---------ANAC58          ===========================MYC_MYB   <---------YAB1        --------->ANAC46       <---------O2  <---------GLK1(2)     <---------LBD16         --------->TGA1a -------->ICU4        --------->ARR14(2)        <---------TGA1a                            <---------ANAC58 ---->ZAT18           <---------ARR14(2)      <---------ALFIN1                             <---------ANAC58 -----ZAT18           XXXXXXXXXXXXXXXXXXXX>MIR2934   <---------ANAC58                  <------MYB46(1) -----ZAT14 >>>>>>>>>>ABI3     --------->ANAC58 --------->O2                           <------MYB83 ---->ZAT14 >>>>>>>>>>FUS3--------->LBD16  --------->PCF2--------->HSFB2a(2)       <-----------RAV1(1)   cactgattcttgcatgcattactgtttccgcaaacgcctgaccatgtcccacttggcttctcgcacaacttctgtgcttccaccattgttggtgcttctg  17926500                                                                                               <-----                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                                                                                             <-------                                                                                            <--------                                >>>>>>>>>RAP2.2                                             ---------                                --------->TOE2(3)                                           ---------                     --------->YAB1                                                         <--------         --------->ANAC46    --------->WOX13(1)                                             <--------       --------->ANAC46    <---------ATHB12                                                 ---------       <-----------GT1   --------->WOX13(1)                                                 ---------       <---------ALFIN1<---------YAB1      ----------->GT1                          --------->AHL20(2)     <-----------GT1 <---------ICU4      ---------->DOF2      <-----------GT1       <---------AHL20(2) --------->AHL20(2) --------->ICU4 ---------->DOF2  ---------->DOF2--------->AtLEC2 --------->YAB1   catatatatacaccccttgttaattatcaatcaatctaaaagagaaagaaaaatcaaagttttttttccatgcatatatatgacaattatataagatctt  17926600    --------------->AGL15   ----------------->AGL2 -----DOF2 --RVE1(1) -ARR14(2)                                    <---------YAB1 >ARR14(2)                                    --------->ICU4                         <----------DOF2 >AGP1---------->DOF2                    <------MYB83                          <----------DOF2 -ARR11(3)                               <------MYB46(1)              <---------YAB1<---------ANAC58 -ARR14(3)         <----------ID1  --------->DAG2     --------->At4g35610 --------->YAB1 >ARR14(3)    ---------->DOF2 --------->At4g35610     <---------At4g35610<---------YAB1        ------ >ARR11(3)  --------->At4g35610   ---------->DOF2<---------YAB1    --------->ICU4   <---------ANAC58<   tactcaccaaaagcagcaaagagaacaagagcagcgaaaaggaaggtgatgatggtagcagacttagccatgactattatacttttgctttgcaatgtat  17926700                                                     <-----------TBP                                                   --------------->AGL15                                                --------->TOE2(3)--------->ICU4                                              ------->TEIL     <---------At4g35610               <---                                              -------->P     --------->ZAT18                    -----                                           <------ZmHOX2a(2) <---------ZAT18             <---------AtLEC2                                    --------->YAB1 <---------------AGL15            <----------DOF2 < ->TEIL                           *TSS    --------->ARR11(3) <---------ZAT14  ----------------------- ----------DOF2            ----------->GT1<---------ARR11(3) --------->ZAT14<---------ZAT6 --------->ANAC46   gtcttttgtatgtttgaatgtgggatgtgaagaaataagcataagatcaacctctatttatagtgaactgatgaagaagagttagtcttttacatgtcat  17926800          --------->O2                                                      --------->YAB1          --------->ANAC58                                                --------->ARR11(3)          --------->ANAC46                                               <---------GLK1(1)          <---------O2                                                   --------->GLK1(1)        <---------ALFIN1                                    <---------------AGL15      ------->GAMYB                                --------->TOE2(3)    --------->ARR11(3)     --------->ANAC46                             --------->YAB1-------->HAHB4    -------->P                                    ----------->GT1       <---------ARR11(3)       ---- ------ICU4                                   <---------AHL20(2)--------->YAB1<---------YAB1     <--- ---->ICU4--------->ANAC58                   --------->AHL20(2)<---------YAB1 --------->ICU4<-------- -----------HVH21                        --------->ARR11(3) --------------->AGL15          <---------ATHB12 >TaNAC69(2)                             <---------ARR11(3)----------------->AGL3   --------->WRKY38(1)   catgtcaaccccacgtagtaaacacagactgtaatctatagtagatattaaatcgtaaatagctaataatagaagatatcatgatgttgactaatcaata  17926900                                                                                                 <---                                                                                                 <---               --------->ANAC46                                                         <---------MYB52(1)               <---------ALFIN1                                                       <---------ANAC46       <------MYB46(1)                                                                <---------ANAC58     <---------ANAC58                                                                 <---------ANAC58     <---------ANAC46                                 --------->YAB1                 <------NtERF2     <---------ANAC58                             ------>ZmHOX2a(2)                <---------DEAR3(1)   <---------MYB46(3)               ---------->DOF2--------->WOX13(1)      <---------LBD16   <------- ----->ANAC55(2)          <----------DOF2       --------->AGP1          ---------->DOF2<-------GAMYB ------ANAC55(2)  <---------ALFIN1<---------YAB1<---------ARR11(3)  ------->TEIL  --------->ATERF1(1) -ICU4 <------MYB83     <---------YAB1     ------>NtERF2        <---------TOE2(3)<---------ATERF1(1)   cttgatggctggtttctccaccacttatctttacatatgaaaggctgcctgatctatcatctatctaatgtaacttaagcgggaggctgcgttggctttg  17927000                                    ----------->GT1                                    <---------MYB46(3)                                    --------->AHL20(2)                                  <---------ANAC46                                        <---------YAB1                                 <---------ZAT2                 --------->ARR11(3)        <---------AHL20(2)                                 --------->ZAT2<---------ANAC58 <---------AHL20(2)       --------->AHL20(2)   --------->ICU4                <---------At4g35610            <---------AHL20(1)       --------->AHL20(1) ------TOE2(3)     <---------MYB46(3)          <---------ANAC58 --------->AHL20(1)       <---------AHL20(1) ------TOE1(3)<---------TOE1(2)  --------->At4g35610            --------->AHL20(2)    --------->AHL20(2) ---DOF2    <---------SPL7     <---------DEAR3(1)               <---------ARR11(3)  --------->AHL20(2)   aggtaatgcttcatcgttcgattgttcacatgggctgctggttaatttgacttgttcaagactcaatatattctattttcgatgaaaaaaatataattaa  17927100                                                                              <---------GLK1(2)                                                                              --------->ARR11(3)                                                                             <---------RVE1(1)                                                                            ----------->ARR10                                                                  <---------ZAT6            <-------GAMYB                                                                  --------->ICU4           --------->MYB52(2)                                                                  <---------YAB1           <---------MYB46(3)                                                      --------->YAB1 <---------WOX13(1)   <-------TEIL                                                     <---------TOE2(3)     <------NtERF2 <---------MYB52(1)              <---------AHL20(2)      --------->At4g35610    <---------REM1(1)<---------ARR11(3)          <------------------------ANAC81            <---------YAB1--------->ATHB12   <---------TOE1(2)   gaaggttatctctgattttttttttttttttttgcaagtgagcccaagtcttattaacataagttgtagtgattggcagagattttccgacgttcgttga  17927200  Previous    Next  AGI:  At5g44430.1    Description:  PDF1.2c (plant defensin 1.2c). similar to PDF1.2b (plant defensin 1.2b) [Arabidopsis thaliana] (TAIR:AT2G26020.1); similar to putative plant defensin PDF1.3 [Arabidopsis halleri] (GB:AAY27738.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 17926172    to: 17926734    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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