Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------ARR14(2)                                 <---------ANAC58            <-----------ARR10                    <---------At4g35610       --------->ANAC58                          --------->At4g35610                            -----       --------->ANAC58                       --------->At4g35610                    --------->YAB1 -------->ANAC46                              <---------At4g35610           <---------WOX13(1)<------ ---------GT1 --------->TOE2(3)               ----------->RAV1(2)  <---------CCA1(2)<---------ATHB12 ----DOF2   --------->GLK1(2)                ------->TEIL      <---------ANAC46    --------->ANAC58 >ID1  --------->ANAC46                <----------DOF2         <---------ANAC58    --------->ANAC58--   aaactccacaagcaaatctaaatgcctctctggcctaaattcttttgcatctgctcccaaaattgtcgtgtctcttagattgcccaagcattagttatca  17923300                    <------MYB46(1)                    --------->HSFB2a(1)                    <------MYB83                   <---------TOE1(2)                   <---------TOE2(2)                --------->TGA1a                       <---------AHL20(2)                --------->O2                          --------->AHL20(2)        <---------YAB1                --------->ANAC46                  <---------AHL20(2)          --------->CCA1(2)                <---------TGA1a                   --------->AHL20(2)         --------->ARR11(1)                ====================bZIP_DOF      <---------ICU4             --------->ARR14(2)         --------->GLK1(1)                       --------->ICU4              <---------ARR11(3)    ----------->RAV1(2)                          <---------YAB1              <---------ARR14(2)    <---------At4g35610  <----------DOF2      <---------AHL20(2)           <-------TEIL    --------->At4g35610<-------TEIL         ----------->GT1  <----------ID1----------->ARR10 ---->WOX13(1)  <---------O2                --------->ANAC55(2)           <--------P              --- ---YAB1 <---------GLK1(1)                  <---------ANAC55(2)        <---------TOE2(3)    --------- ------->YAB1  <---------TOE1(2)   <-----------GT1--------->ATHB51  <---------ATHB12  <-----------GT1   gtcatcacctgaattcccacgtaggttctttaaaatttcactaaatatgtaattatttaaaaaaaaacaaatcaaggtagatatgattttaccaatgttc  17923400                  --------->AHL20(2)                <----------DOF2                ------>ZmHOX2a(1)            <---------ARR14(2)--------->TOE2(3)                                             ---------            --------->ARR14(2)--------->YAB1        <---------ICU4                        <---------AHL20(2)         --------->YAB1 <---------AHL20(2)          --------->ATHB51           <---------ALFIN1        <---------YAB1 --------->AHL20(2)  ------>ZmHOX2a(1)                 --------->SPL7<---------AHL20(2)       <---------ARR11(3)   <---------ARR11(3)      --------->ATHB12         ------->TEIL --------->AHL20(2)       --------->ARR11(3)  <---------CCA1(2)        -------->ATHB1       --------------->AtSPL3 --->ZmHOX2a(1)--------->TOE2(3)  <---------YAB1   --------->ICU4        --------------->AtSPL8 >HSFB2a(1)<---------CCA1(2)--------->ARR11(3)     <---------YAB1 <------ZmHOX2a(1)   <---------MYB52(1)   ctgcagcaatatcatatcctttaaattttatatcttaatatagtcctcagagaattattggaaatggaggatgcaaacgtaccacttcgttttttaataa  17923500                                                   <---------DAG2                     --------->ZAT18     <---------ANAC58                     <---------PCF2      <---------ANAC58            --------->ANAC58       <------ZmHOX2a(1)                  --------->ALFIN1   <---------ANAC58           <---------LBD16    ----------------->AGL1                <-----------RAV1(1)  <---------ANAC58  <---------YAB1--------->ANAC58    <---------LBD16 >YAB1       --------->TOE2(2)     <-----------GT1 <----------DOF2--------->LBD16--------->AtLEC2   ctaagaggttctaaacctatgtggggactagagcattttacttgcttcttctactttatcatccatcccgcatgcctctattcatgccaaaccaggaatg  17923600                    ------>ZmHOX2a(1)                   --------->TOE1(2)                --------->ARR11(3)                <---------ARR11(3)                --------->ARR14(2)               --------->CCA1(1)                             *TSS               --------->RVE1(1)                          ----------->GT1          ----------->GT1                          ------>ZmHOX2a(1)          <---------TOE2(3)          <<<<<<<<<<E2Fb      ---------->DOF2     --------->TOE2(3)      <---------YAB1         ----------->GT1 --------->At4g35610      --------->TOE1(3)   <------ZmHOX2a(2)         --------->LBD16 --------->GLK1(1)   --------->ARR11(3)      <---------ARR11(3)      ------>MYB83----------->RAV1(2)   <---------YAB1<---------YAB1 --------->ARR11(3)      ------>MYB46(1)    <---------At4g35610 <---------ARR11(3)<---------YAB1 <---------TOE1(3) <-----------GT1<---------ARR14(2)  <----------DOF2==========================HOX2a_HOX2a   tattcaccaagcgggaaatatcctgagagctccaaagtctttctgattatctccttaacattgttatattagatcatgttaagtttataggcttctaatt  17923700                                                                                      <----------DOF2                                                                                     <---------DAG2                                                                                  <-----------------AGL1                                                                                <----------DOF2                                                                               ------>ZmHOX2a(2)                                                                               <---------HSFB2a(1)                                                                               --------->HSFB2a(1)                                                                             <---------ARR11(3)                                                                             --------->ARR14(2)                                <---------YAB1                 <----------DOF2<------ZmHOX2a(2)                             <---------YAB1                <---------CCA1(2) --------->ARR11(3)                     <---------WOX13(1)                    ------>ZmHOX2a(1) <-----------ARR10                    <------------CBF                       ==========================HOX2a_HOX2a                    <---------ANAC58                       ===========================HOX2a_HOX2a                   --------->ATHB12                   <----------DOF2        <---------ARR14(2)             --------->ICU4<---------At4g35610     --------->ARR11(3)       <------ZmHOX2a(1)      --------->ICU4<---------ANAC58<-----------TBP<---------ARR11(3)     <---------TOE2(3)   <------   caaatctaattagtaatgagttgattggcatatgattcttatatagtaatcaagttctttcctatctttgttgatttaggatctttcccttttggaccta  17923800                                                                             --------->MYB52(1)                                                                            <---------ALFIN1                                                                            ------->GAMYB                                                                            --------->AtMYB61                                                                           <---------MYB111(2)                                                                           <---------MYB55(2)                                                                           --------->MYB46(3)                                                                          ------>MYB46(1)                       <-------TEIL                                       -------->P                      <------ZmHOX2a(2)     <-------TEIL                  ------>MYB83                     <---------ARR11(3)   --------->AGP1               ------>ZmHOX2a(2)                     <---------ARR14(2)   --------->ARR14(2)          <------ZmHOX2a(2)                     --------->AGP1       <---------ARR14(2)         <-----------ARR10               <-----------GT1       >>>>>>>>>WRKY18                 --------->ARR14(2)       --------->GLK1(2)          <---------ICU4           ----------->RAV1(2)--------->At4g35610       --------->ARR14(2)  --------->ARR14(2)   <---------ICU4       <---------ARR14(2)    <---------       <---------ARR11(3)  <---------ARR14(2)   --------->ATHB12   --------->LBD16   <---------AHL20(2) <-----------GT1     --------->ARR14(2)  --------->At4g35610     <---------LBD16    --------->AHL20(2) ---MYB59 <---------YAB1  <---------CCA1(2)<------ZmHOX2a(2) ----------->HVH21----------->RAV1(2)   <   aattcacaaaatctgattatccagatccatatccaattttgacagatccatgatttcattaccctgatgcggatccaaccacctgaattaatatcacccc  17923900                             <------MYB83                     <---------WRKY12                             <------MYB46(1)             <---------ANAC58                           <--------P                    <---------ANAC58                          <-------GAMYB               <-----------GT1     <---------YAB1    ------->GAMYB               <---------AHL20(2)   --------->YAB1   --------->MYB52(1)           --------->ICU4                                ------ --GT1           --------->ANAC46                <---------YAB1                              -------- ----------DOF2<---------AHL20(2)           ----------->GT1   <---------WRKY38(1)   ----------->GT1 -   tgctttcatgagtgtatataaacaacggggttggaaatgaaatggtgagttattattttccttgtcaacgtgaacatacaataacacagttaaacccaca  17924000                                                   -------->HAHB4                                                  <---------YAB1                 <------MYB46(1)                                             ----------->GT1                   <---------ANAC58                                             <------MYB83                      <---------ANAC58                                             <------MYB46(1)                 <---------MYB46(3)  ----                                            --------->MYB46(2)         <-----------HVH21    ---------                                            --------->MYB59           --------->DEAR3(1)    ------->GAMYB        --------->GLK1(1)                  <--------P                --------->DEAR3(2)    --------->MYB46(3) --->ANAC46                      <-----------GT1  --------->ICU4    ------->TEIL <------MYB83    <--- --->RAV1(1)                     <---------AHL20(2)--------->YAB1 <-------TEIL <---------ANAC46  ---- -------->AHL20(2)            --------->YAB1--------->MYB111(1)   <---------ABI4(2)      <-----------GT1   aaataaacacatttccctcttctactagacaatattaacttgcaagtaggtaataatagtagataagatgcaccgtcgatggctggtttttcaaccacat  17924100                                                                       <---------AHL20(2)                                                                      --------->AHL20(2)                                     <---------MYB52(1)           <---------AHL20(2)                                -------->P                        <---------YAB1     ------>NtERF2              --------->MYB52(1)                --------->AHL20(2) ----->MYB52(1)             --------->ANAC58                     --------->AHL20(1) -->RAV1(1)                 --------->ANAC58  <---------ANAC58   <---------AHL20(1) ------ARR14(2)             --------->ANAC46  <---------ANAC58   --------->AHL20(2) ----->ARR14(2)    ----------->GT1 ----------->GT1 --------->WRKY18(1)<---------AHL20(2)    ---------   atcgggctgcctctctatcaaatgtaacataagcaaccggttaatttgacttggtcaagactctcaatataattaaatagttcaatgtttagaatcagag  17924200  Previous    Next  AGI:  At5g44418.1    Description:  pseudogene, hypothetical protein Range:  from: 17923137    to: 17923661    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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