Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ARR14(2)      --------->ARR14(2)    ----------->ARR10    <---------MYB46(3) <---------ANAC58 <------MYB46(1)                       <---------ATHB12 <---------ANAC58                      --------->MYB46(3) <------MYB83                         ------>MYB83                                         ---------- <---------ANAC46                     -------->P                                           ---------- -------->MYB111(1)                   ------>MYB46(1)                        --------->KAN4(2) ------MYB83                       <---------MYB59                           <---------GLK1(2) -------->MYB55(2)                 --------->MYB46(3)                       <---------HSFC1(2) ---------MYB46(3)                --------->ANAC58              --------->ARR11(3)     <------ZmHOX2a(2) ------MYB46(1)                   --------->ANAC58              >>>>>>>>>>GT-1        --------->AGP1 -------MYB52(1)                ------>MYB46(1)                --------->YAB1<---------ARR14(2) ------P                        ------>MYB83                  <---------ATHB12    ------>ZmHOX2a(1) -----MYB46(3)      --------->ANAC58 ------>MYB83            <---------TOE2(3)   --------->TOE2(3) ---->AtMYB77       --------->ANAC58 ------>MYB46(1)   --------->O2         --------->HSFB2a(1) ->MYB52(1)       ---------->DOF2------->TEIL          <---------O2         <---------HSFB2a(1)   <-- >DEAR3(1)   <---------ANAC46 <---------MYB59  <---------MYB52(1)           --------->HSFC1(2)   <---   gttgggtggatactggctgggaaagcaagagaccgaacccaaccagtccggttttcgacgtctaatgatatagaccgaagattcctcagatcgatgacga  17920200                                                  <------NtERF2                                                 <---------At4g35610       ---------->DOF2                                                 --------->At4g35610      ----------->HVH21                                                 --------->ABI4(2)        <---------MYB52(1)                                                 ------>NtERF2           --------->LBD16                                                <---------DEAR3(1)      <---------ANAC46                                         ----------->HVH21              <---------ANAC58--------->At4g35610                                        <-----------HVH21               <---------ANAC55(1)                                       <---------O2            <---------ANAC58        <---------ARR14(2)                                       <---------TGA1a         <---------ANAC46        --------->ARR14(2)                                       <---------ANAC58        <---------ANAC55(1)     <-----------ARR10                                       ===============================================bZIP_DOF             --------->ANAC58          <---------ANAC58        <---------ANAC55(2) <---------ZAT18             --------->ANAC55(2)     --------->ZAT2  <---------ANAC58   <---------ANAC58<---------At4g35610          <---------SPL7             <---------ZAT2  <---------ANAC58   <---------ANAC55(2)       <-------GAMYB       <-----------GT1<---------WRKY18(1)  <---------bZIP60(2) --------->ZAT14      <---------MYB46(3)   <---------WRKY18(1)<---------ATERF1(1)       --------->ANAC55(2)      --------->MYB52(2) <---------WOX13(1)  <---------DEAR3(1)<---------ANAC58    --------->ZAT18 ->HVH21<---------------AtSPL8      --------->ANAC46------>NtERF2   <---------ARR14(2) ------->TEIL ->TGA1==========================================MYC_MYB    ------>ZmHOX2a(1)      <---------ZAT14 -------SPL7 --------->ANAC58   ------>MYB46(1)--------->RAP2.3(1)  --------->ARR14(2) --------->GLK1(2) ------ANAC46--------->ANAC46   ------>MYB83--------->DEAR3(2) <---------O2--------->REM1(2)---------   cgtatggtttgttgtacgcaatgtaagattgaccttcccagccgtgaccggcgctgcgagtccttacgtggattccgtgaagcagtgcgcatctgatcac  17920300                                                                 --------->ARR14(2)                                                                 <---------ARR14(2)                                                                 --------->ARR11(3)                                                                 --------->GLK1(2)                                                                 <-----------ARR10                                                         <---------ARR14(2)                    <---------LBD16                      --------->ARR14(2)      <-----------HVH21       --------->ATHB12        <---------HSFB2a(2)            <---------HSFB2a(1)     --------->ANAC58        <---------YAB1           --------->HSFB2a(2)            --------->HSFC1(2)     --------->ANAC46     ----------->HVH21          <---------ANAC46                --------->HSFB2a(1)     --------->ANAC58 --------->LBD16                <---------LBD16          <---------AtLEC2  -----    ------->TEIL ----------->HVH21                  <---------LBD16   <---------TOE1(2)--------->GLK1(2) -------------->TaNAC69(2)----------->TGA1   <---------AtMYB61  <---------GLK1(2)    <---------HSFC1(2)   ggtttgaacgtcactggctctaaccggagtgacgattgagaccggtttaggtgtttcgggaaccgagaatcttgggttttgtatggaagaatccaagatg  17920400                                     <---------ARR14(2)      >>>>>>>>>NAM                   --------->ARR14(2)      --------->LBD16                  -------  --------->DAG2              --------->ARR11(3)      <---------MYB52(1)                     <------- ---------->DOF2            <---------YAB1          ----------->GT1---------->DOF2         <---------MYB46(3) ------>GT1           --------->ALFIN1--------->CCA1(2)    <---------LBD16      ---------->DOF2   gaaaaaagggatgagtctttggaagtgtgtatgattttggatacgatggtgttgtcgttaatccggtgagaaagacacttaagaaagtcttcgtggttat  17920500                                                                                                    <                                                                                                    <                                                                                               <-----                                                                                               <-----                                      ----------->GT1                                       <--------     --------->At4g35610            <-------TEIL                                           --------->ATHB12 -->ATHB12                 <------ZmHOX2a(1)                             *TSS             <---------YAB1 --YAB1                   ----------->GT1                     ---------->DOF2             --------->ICU4   tggtatgagctaaaacaagagtagagagaggagaaacatacagtagaaagagtaagagagagagcaaagagtttgagaactctatttttgtaaagattgg  17920600                              <---------AHL20(2)                                        <-----------HVH21                      <---------WRKY18(1)                                              <---------O2 ---------YAB1      <---------WOX13(1)                                                 <---------bZIP60(1) ---------AtMYB61  <------------CBF    ---------->DOF2         <---------DAG2          --------->bZIP60(1) -MYB83          --------->ICU4  --------->HSFB2a(2)           <----------DOF2         --------->O2 -MYB46(1)       <---------YAB1  <---------HSFB2a(2)  --------->ANAC58              ----------->HVH21 ----CBF  --------->ALFIN1   <-----------TBP          --------->ANAC58     ---------->DOF2 ----------   tgatggtagagagtgtgtgaagattgactgaatttatagaaaaaagaagtagggagaagccctaactttttggaccctaaagaggtttgacgtcaaagaa  17920700                                                                    <-----------GT1                                                               <---------AHL20(2)                                  --------->YAB1             <---------AHL20(2)                           --------->WOX13(1)              <---------AHL20(2)                        <-----------TGA1                  <---------AHL20(1)               ----------->GT1   <---------ATHB12         --------->AHL20(1)                      ---          <---------AHL20(2)   --------->WOX13(1)         <---------ARR11(3)--------->HSFB2a(2) <---- >DOF2--------->YAB1   --------->YAB1        XXXXXXXXXXXXXXXXXXXX>MIR860    <---------HSFB2a(2) -----   aatcccaaatataaaaattgataaatcgtcattcaatcacaaaatgagtagattgaactatatatttttttttcatttctaaaaacgaatatttcaaatt  17920800                                      <------MYB46(1)                                      <---------MYB46(3)                                     <---------TOE2(2)                                    <---------MYB52(1)                               --------->ARR14(2)                            --------->HSFB2a(2)            --------->AHL20(2) <---------ARR14(2)                                   <---------At4g35610     ----------->GT1        <---------HSFB2a(2)                              <---------YAB1  ---------->DOF2          <-------TEIL<<<<<<<<<<MYB80  <-----------GT1    --------->YAB1     <------ ------->DOF2           --------->At4g35610 <---------TOE2(3)  --------------->AtSPL8       <-------- -----AHL20(2)          <---------At4g35610---------->DOF2     <---------------AtSPL8 <---------YAB1 ---->AHL20(2)         --------->MYB59<------MYB83      --------->ZAT6    <---------YAB1 <---------YAB1   aaaagaaaggtatataaaatgtagtcaggtccagaaacgttggtttaaagtatacatatcactatttagtactactatgatgagtcatatgattattttt  17920900                           --------->YAB1                      <---------YAB1                    <------ZmHOX2a(1)                          <-      --------------->AtSPL8                          <---------TOE2(3)                            <-      <---------------AtSPL3                          --------->ANAC58                             <-      --------------->AtSPL3                          --------->ANAC58       --------->AHL20(2)    <- ---AHL20(2)   ------>ZmHOX2a(1)         --------->CCA1(2)           <-------TEIL   ---------->DOF2<- -YAB1<---------------AtSPL8      --------->YAB1 <---------YAB1---------->DOF2 --------->AHL20(2) ---   ttgatgaagaagtactcctatatgatgagtcataactcataagataagaacatgataaggaatagaaaagatgcaaaaaaaaaatataaagaatataagt  17921000                                 <---------AHL20(2)                                 --------->AHL20(2)                          --------->ANAC58   <---------AtMYB61      --------->ANAC58 --------ANAC58       ---------->DOF2                                          <---------TOE2(3) --------ANAC46    <----------DOF2           --------->ANAC58                  <---------TOE1(3) --------ANAC58 <---------ARR11(3)           --------->ANAC58                  <---------YAB1 -----MYB83     --------->ARR11(3)  <---------YAB1                          --------->ICU4 -----MYB46(1) <---------CCA1(2) --------->AHL20(1)                  <-----------GT1 ------>MYB59<---------CCA1(2)  --------->AHL20(2)    ------>ZmHOX2a(2)     <---------ATHB51   tgggtatggtagcccatatatctttcaagcgcaattttattattagcactcatcgatcgtattatgtcatttcacaaaattatggttttgacacatttca  17921100  Previous    Next  AGI:  At5g44417.1    Description:  pseudogene, similar to CPRD2, blastp match of 42% identity and 7.0e-94 P-value to GP|13161397|dbj|BAB33033.1||AB056448 CPRD2 {Vigna unguiculata} Range:  from: 17919059    to: 17920573    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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