Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ANAC55(2)                                             --------->At4g35610                                             <---------At4g35610         <---------YAB1                      --------->ZAT2      <---------YAB1                  <----------DOF2                                      <---------At4g35610    <---------MYB46(3)               ------>ZmHOX2a(2)                                     --------->At4g35610  >>>>>>>>>ARR1                    --------->ARR11(3)                         --------->ANAC46  >>>>>>>>>ARR2                    <---------ARR11(3)           --------->REM1(1)       <------ZmHOX2a(1) ---------YAB1                --------->ZAT2 <---------ZAT2 --------->At4g35610       <---------TOE2(3) ---------GT1        <------ZmHOX2a(2)----------------------->TaNAC69(2)    <---------ICU4 <---------ZAT2   ttacgattgttattgtagagacgatcacgacgagctcgatctttctcagcttcacgtttcttagcttcaacttcttcatcacgacgttgaggaagctgat  17873500                                                     <---------MYB46(3)                                                    --------->ALFIN1                                                    <---------AtMYB61                                                   <------NtERF2                                                   <-------GAMYB                            <------NtERF2                                                  <---------MYB46(3)                       <---------RAP2.3(1)                                                 <---------DEAR3(1)                <------NtERF2                                                 <---------DREB2C(2)             --------->DEAR3(1)                  ------->TEIL                   <---------AtMYB61               <---------ANAC46                 <---------GLK1(2)               --------->ALFIN1                <---------ANAC58            --------->ATHB12                     <---------ANAC46                <---------ANAC58           <---------YAB1                       <---------ABI4(1)               --------->RAP2.3(1)           --------->ICU4                       ------>NtERF2                   <------NtERF2     <---------TOE1(3)                          <------NtERF2  --------->WRKY38(1)------>NtERF2 -----     <---------TOE2(3)                        <---------DEAR3(1)           --------->DAG2  ------>NtERF2  --------->ARR14(2)                         <---------LBD16 --------->LBD16    --------->ATERF1(1)  <---------ARR14(2)                         --------->ATERF1(1)          ---------->DOF2 <---------DEAR3(1)  <---------MYB52(1)        --------->MYB59 <---------bZIP60(2)<---------ETT(2)<---------RAP2.3(1) <- <-------GAMYB<---------WOX13(1)          <------ZmHOX2a(1) <---------ANAC46  <---------DEAR3(1)<----   ttcggttatggtattgattgaatctccatttaggtccgaatttaggacgcggcggtggttttccgtcgactaatcggaaagcggcgtcttcgtcggcgtt  17873600                                                                                              <------                                                                                   --------->ALFIN1                                                                               =================HOX2a_HOX2a                                                                    ============================HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)         -------                                                                   <---------At4g35610        -------                                                                  ------->TEIL ------>ZmHOX2a(2)                          --------->REM1(1)                       --------->ARR14(2)     <------ZmHOX2a(1)         <---------MYB46(3) <---------At4g35610                   <---------AGP1  <---------MYB52(1)      ------------>MYB.PH3(2)                                  <---------WOX13(1)--------->LBD16 --------->ZAT2         ------>ZmHOX2a(1)                 <---------At4g35610  <---------LBD16<------ <---------ZAT2        --------->TOE2(3)                 ------>ZmHOX2a(2)    <------ZmHOX2a(2) <---------At4g35610<---------ARR14(2)                  <------ZmHOX2a(2)     --------->ARR14(1) ----------->RAV1(2)--------->ARR14(2)                 --------->ARR11(3)     ==================HOX2a_HOX2a ---->ARR14(2)     ------>MYB46(1)             --------->GLK1(1)  <---------ARR14(2) --------->ALFIN1 --------ALFIN1    ------>MYB83         --------->At4g35610 ----------->HVH21--------->ARR14(2)    <- -----ARR14(2)   <---------MYB59     ---------->DOF2   <---------ARR11(3)    <---------ARR14(2) -----   tccacctgagtttgttagaccaaatccttcatctactgcaaaagctgagaaatcgaagatcgctgatggatctgatttggatccggtgtgaggacgagct  17873700                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              <------NtERF2                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             ------>NtERF2                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                           --------->ATERF1(1)                                                                                           --------->DEAR4(2)                                                                                           --------->ERF1                                                                                           --------->RAP2.3(1)                                                                                           --------->ORA47(2)                                                                                          <---------ATERF1(1)                                                                                          <---------RAP2.3(1)                                                                                        <-------TEIL                                                                                       --------->ARR14(1)                                                                                       --------->CCA1(2)                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2) ---ZAT2    <---------ZAT2 --------->At4g35610      --------->TOE1(2)                 --------->ARR11(1) -->ZAT2    --------->At4g35610   <-----------HVH21------>ZmHOX2a(2)                  <---------GLK1(2) -->At4g35610             --------->ANAC46        <------ZmHOX2a(2)                  <---------GLK1(1) ---At4g35610            --------->YAB1          --------->ARR14(2)                  <---------HSFB2a(1) --------WOX13(1)       <---------ATHB12         <---------ARR14(2)                 ----------->ARR10 ------>HVH21         --------->WOX13(1)     <---------LBD16                       <------ZmHOX2a(1)<   gatggatttgagagagctcgagtccaatcagcaacgcgtccgagtttttcggatcgtgagaaggaagcgaaggggacgtttgggaggagattcgccgccg  17873800      --------->ALFIN1 --->NtERF2 ------->HVH21 ------DEAR3(1) ---->LBD16 ->NtERF2 --NtERF2                                --------->MYB46(3) --->DEAR3(1)             ----------->RAV1(2) --->RAP2.6(2)           --------->GLK1(2) --------->MYB52(1) -->RAP2.3(1)          <---------HSFB2a(1)------->GAMYB -->ATERF1(1)          --------->HSFB2a(1)--------->AtMYB61 --RAP2.3(1)           --------->HSFC1(2)<---------ATHB12 --ATERF1(1)           <---------HSFC1(2)<---------MYB55(2) ->ABI4(1)            --------->ANAC58  ------>MYB83 >DEAR3(1)            --------->ANAC58  ------>MYB46(1) >ANAC46          --------->ETT(1)      -------->P                                                 <- -DEAR3(1)      <-----------HVH21 --------->PCF5                      --------------------->WRI1   -- >RAP2.3(3)    --------->ALFIN1<---------AtMYB61                   ------>NtERF2                  --- >RAP2.3(2)   --------->HSFC1(2)  <---------PCF2                   <---------RAP2.6(3)          ----- >ATERF1(2)   <---------HSFC1(2)<---------MYB46(3)                --------->DEAR3(1)            <---- -ATERF1(2)<------ZmHOX2a(1)<-----------RAV1(1)                  --------->ORA47(2)   >>>>>>>>>>>>>>> ---------DEAR3(1)<---------ANAC46--------->TCP16(1)             --------->DEAR3(2) --------->MYB46(3)   cgacgctggtggaggaagtgtcggaagcatctggtggtccccaaccatcggaattgaatgggactgtgccgacttcgaatgcttcaaacaccattgttga  17873900                    ----------->GT1            --------->CCA1(2)           <-----------------------TaNAC69(2)           --------->ARR11(3) --------GLK1(1)--------->ANAC58 ------->CCA1(2)--------->ANAC58                     --------->YAB1 ------>ARR14(2)--------->ANAC46                ------------>CBF             <------NtERF2 ------>ARR10  --------->ZAT18       <---------AHL20(2)                      ------------>CBF -----TOE2(3)  <---------ZAT18       --------->AHL20(2)          ----------------->AGL1          ---- >>LFY *TSS<---------ARR11(3)        <---------AHL20(1)         <-----------------AGL2<----------DOF2   gatttgcgaagaagatgtgcgcaagtgaaaaatttgtattttattttgtcaacaatgaaaaccctagcccttaatgggcctcaatgggcttttctcttgt  17874000                                                                 --------->MYB52(1)                                                              --------->At4g35610                                                              <---------At4g35610                                                       <---------MYB46(3)                             <---------YAB1            <---------DEAR3(2)                           --------->YAB1             <---------DEAR3(1)                           <--------HAHB4             <---------TOE2(2)                           --------->ATHB51        <---------TGA1a                           <---------ICU4          ==================================bZIP_DOF                          --------->ICU4           --------->TGA1a                          <---------YAB1         <------ZmHOX2a(1) --------->MYB46(3)               <----------DOF2               ================bZIP_DOF --------->ANAC58 ---------->DOF2            ---------->DOF2 <---------TOE1(3) --------->ANAC58 ===========================================bZIP_DOF ----->YAB1    ==============================================bZIP_DOF     <----------DOF2 <---------GLK1(2)   cataagaaactctagcccttttaagcccattattatctcactcagtcaaaaggacgtcggtttaagctaaccaatgcttttggtttgggctatattctct  17874100                                                                                     --------->MYB52(1)                                                                                    <---------ATHB12                               --------->AHL20(2)--------->MYB52(1)      ------>ZmHOX2a(2)                           <-------TEIL<------ZmHOX2a(1)               <---------ARR11(3)                        ------->GAMYB<---------TOE2(3)                 --------->ARR11(3)  ------->TEIL                       --------------->AtSPL3<---------TOE2(3)    <-------TEIL  --------->MYB46(3) --------->YAB1      <-----------GT1 <---------TOE1(3)   ----------->ARR10  <---------MYB52(1)  <----   caatcgaaattttgggttatattcaaccgtacatttattaaggaattaagaaaccggcttagaaccggttcatgatctgttaaccaataactgaacgttg  17874200                                                              <-----------TBP                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     --------->AGP1                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                     <---------ARR14(2)                               ---------->ID1--------->AHL20(2)                             --------->ANAC46<---------AHL20(2)    <-----------GT1                  <                     --------------------->WRI1      --------->ARR14(2)                            -- -----ZAT18         ------->TEIL             <---------AHL20(1)   <---------CCA1(2)<----------DOF2<--   cacttcaattcaaaagtttacgaatttgtactcgtcgcaaaacttattttatttagatccttgtttttatatccatgtctcacttctttcccctaagttt  17874300                                                                                        <---------HSFB2a(2)                                                                                        --------->HSFB2a(2)        --------->ANAC55(2)                                                            <---------LBD16        <---------ANAC55(2)          <-----------GT1                         ------------>CBF   <---------MYB46(3)           <----------DOF2                          --------->ARR14(2) ------------CBF          ---------->DOF2                                --------->GLK1(2) ------->ATHB12          <---------AHL20(2)                             <---------GLK1(2)--------->LBD16 -------YAB1           ----------->TBP                              ---------->DOF2   <---------LBD16   ttcattggttacttaaggtccaactatataaagacttttttactctcttctcttcttcagagaaaattcaaaaagaatctccaattttctcgggaaaatt  17874400  Previous    Next  AGI:  At5g44320.1    Description:  eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative. similar to eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative [Arabidopsis thaliana] (TAIR:AT4G20980.2); similar to eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative [Arabidopsis thaliana] (TAIR:AT4G20980.1); similar to eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative [Arabidopsis thaliana] (TAIR:AT4G20980.3); similar to eukaryotic translation initiation factor 3 (eIF-3), putative Range:  from: 17871816    to: 17873907    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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